RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
RNF43-205ENST00000581868 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
RNF43-205ENST00000581868 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
RNF43-205ENST00000581868 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
RNF43-205ENST00000581868 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
RNF43-205ENST00000581868 MAP3K1Q13233 1512 aa19.68■□□□□ 0.74
RNF43-205ENST00000581868 MYT1Q01538 1121 aa19.65■□□□□ 0.74
RNF43-205ENST00000581868 FHAD1B1AJZ9 1412 aa19.63■□□□□ 0.73
RNF43-205ENST00000581868 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
RNF43-205ENST00000581868 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
RNF43-205ENST00000581868 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
RNF43-205ENST00000581868 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
RNF43-205ENST00000581868 HIRIP3Q9BW71 556 aaPredicted RBP19.56■□□□□ 0.72
RNF43-205ENST00000581868 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
RNF43-205ENST00000581868 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
RNF43-205ENST00000581868 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
RNF43-205ENST00000581868 PPP1R15AO75807 674 aaPredicted RBP19.47■□□□□ 0.71
RNF43-205ENST00000581868 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
RNF43-205ENST00000581868 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
RNF43-205ENST00000581868 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
RNF43-205ENST00000581868 CASKIN1Q8WXD9 1431 aa19.46■□□□□ 0.71
RNF43-205ENST00000581868 BCANQ96GW7 911 aa19.46■□□□□ 0.71
RNF43-205ENST00000581868 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
RNF43-205ENST00000581868 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
RNF43-205ENST00000581868 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
RNF43-205ENST00000581868 TSHZ2Q9NRE2 1034 aa19.43■□□□□ 0.7
RNF43-205ENST00000581868 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
RNF43-205ENST00000581868 EFCAB5A4FU69 1503 aa19.42■□□□□ 0.7
RNF43-205ENST00000581868 NESP48681 1621 aa19.41■□□□□ 0.7
RNF43-205ENST00000581868 FKBP8Q14318 412 aa19.4■□□□□ 0.7
RNF43-205ENST00000581868 MTUS2Q5JR59 1369 aa19.4■□□□□ 0.7
RNF43-205ENST00000581868 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
RNF43-205ENST00000581868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.39■□□□□ 0.7
RNF43-205ENST00000581868 TONSLQ96HA7 1378 aa19.38■□□□□ 0.69
RNF43-205ENST00000581868 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.699e-8■■■■□ 23.6
RNF43-205ENST00000581868 ANP32CO43423 234 aa19.38■□□□□ 0.69
RNF43-205ENST00000581868 FMN1Q68DA7 1419 aa19.38■□□□□ 0.69
RNF43-205ENST00000581868 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
RNF43-205ENST00000581868 CCDC18Q5T9S5 1454 aa19.34■□□□□ 0.69
RNF43-205ENST00000581868 CUL7Q14999 1698 aa19.34■□□□□ 0.69
RNF43-205ENST00000581868 PTPRKQ15262 1439 aa19.34■□□□□ 0.69
RNF43-205ENST00000581868 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
RNF43-205ENST00000581868 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
RNF43-205ENST00000581868 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
RNF43-205ENST00000581868 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
RNF43-205ENST00000581868 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
RNF43-205ENST00000581868 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
RNF43-205ENST00000581868 NEFLP07196 543 aa19.28■□□□□ 0.68
RNF43-205ENST00000581868 NCOA2Q15596 1464 aa19.26■□□□□ 0.67
RNF43-205ENST00000581868 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
RNF43-205ENST00000581868 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
RNF43-205ENST00000581868 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
RNF43-205ENST00000581868 NAIPQ13075 1403 aa19.24■□□□□ 0.67
RNF43-205ENST00000581868 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
RNF43-205ENST00000581868 RRP7BPQ9NSQ0 103 aa19.24■□□□□ 0.67
RNF43-205ENST00000581868 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
RNF43-205ENST00000581868 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
RNF43-205ENST00000581868 LRRIQ1Q96JM4 1722 aa19.2■□□□□ 0.66
RNF43-205ENST00000581868 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
RNF43-205ENST00000581868 SUPT6HQ7KZ85 1726 aaKnown RBP19.16■□□□□ 0.66
RNF43-205ENST00000581868 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
RNF43-205ENST00000581868 ARID3CA6NKF2 412 aa19.15■□□□□ 0.66
RNF43-205ENST00000581868 EHBP1L1Q8N3D4 1523 aa19.14■□□□□ 0.65
RNF43-205ENST00000581868 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
RNF43-205ENST00000581868 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
RNF43-205ENST00000581868 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.652e-6■■□□□ 12.8
RNF43-205ENST00000581868 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
RNF43-205ENST00000581868 ANP32EQ9BTT0 268 aa19.11■□□□□ 0.65
RNF43-205ENST00000581868 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
RNF43-205ENST00000581868 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
RNF43-205ENST00000581868 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
RNF43-205ENST00000581868 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
RNF43-205ENST00000581868 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
RNF43-205ENST00000581868 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
RNF43-205ENST00000581868 FOXD1Q16676 465 aa19.07■□□□□ 0.64
RNF43-205ENST00000581868 RBM19Q9Y4C8 960 aaKnown RBP19.06■□□□□ 0.64
RNF43-205ENST00000581868 MPHOSPH9Q99550 1183 aa19.05■□□□□ 0.64
RNF43-205ENST00000581868 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
RNF43-205ENST00000581868 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
RNF43-205ENST00000581868 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
RNF43-205ENST00000581868 DENND4BO75064 1496 aaPredicted RBP19.04■□□□□ 0.64
RNF43-205ENST00000581868 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
RNF43-205ENST00000581868 KDM6BO15054 1643 aa19.02■□□□□ 0.64
RNF43-205ENST00000581868 TCOF1Q13428 1488 aaKnown RBP19.02■□□□□ 0.64
RNF43-205ENST00000581868 EPRSP07814 1512 aaKnown RBP19.01■□□□□ 0.63
RNF43-205ENST00000581868 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
RNF43-205ENST00000581868 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
RNF43-205ENST00000581868 CCDC184Q52MB2 194 aa18.98■□□□□ 0.63
RNF43-205ENST00000581868 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
RNF43-205ENST00000581868 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
RNF43-205ENST00000581868 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
RNF43-205ENST00000581868 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
RNF43-205ENST00000581868 IQGAP2Q13576 1575 aa18.95■□□□□ 0.62
RNF43-205ENST00000581868 MIA2Q96PC5 1412 aa18.94■□□□□ 0.62
RNF43-205ENST00000581868 AKNAQ7Z591 1439 aa18.94■□□□□ 0.62
RNF43-205ENST00000581868 FAM9BQ8IZU0 186 aa18.93■□□□□ 0.62
RNF43-205ENST00000581868 CNTLNQ9NXG0 1405 aa18.93■□□□□ 0.62
RNF43-205ENST00000581868 NBPF8Q3BBV2 869 aa18.92■□□□□ 0.62
RNF43-205ENST00000581868 ZNF644Q9H582 1327 aaPredicted RBP18.92■□□□□ 0.62
RNF43-205ENST00000581868 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms