RNA–Protein interactions for RNA: ENST00000580554.1

NCOR1-219, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-219ENST00000580554 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
NCOR1-219ENST00000580554 RAD54L2Q9Y4B4 1467 aa13.34□□□□□ -0.27
NCOR1-219ENST00000580554 AQRO60306 1485 aaKnown RBP eCLIP13.33□□□□□ -0.288e-7■■■■■ 28.7
NCOR1-219ENST00000580554 CUX1P39880 1505 aa13.33□□□□□ -0.28
NCOR1-219ENST00000580554 FGD5Q6ZNL6 1462 aa13.31□□□□□ -0.28
NCOR1-219ENST00000580554 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
NCOR1-219ENST00000580554 SOGA1O94964 1423 aa13.3□□□□□ -0.28
NCOR1-219ENST00000580554 TDRD9Q8NDG6 1382 aaKnown RBP13.28□□□□□ -0.28
NCOR1-219ENST00000580554 DSG3P32926 999 aa13.27□□□□□ -0.29
NCOR1-219ENST00000580554 ABCB7O75027 752 aa13.26□□□□□ -0.29
NCOR1-219ENST00000580554 POLA2Q14181 598 aa13.25□□□□□ -0.29
NCOR1-219ENST00000580554 CHD1O14646 1710 aa13.25□□□□□ -0.29
NCOR1-219ENST00000580554 FBLN2P98095 1184 aa13.22□□□□□ -0.29
NCOR1-219ENST00000580554 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
NCOR1-219ENST00000580554 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
NCOR1-219ENST00000580554 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
NCOR1-219ENST00000580554 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
NCOR1-219ENST00000580554 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
NCOR1-219ENST00000580554 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
NCOR1-219ENST00000580554 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
NCOR1-219ENST00000580554 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
NCOR1-219ENST00000580554 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
NCOR1-219ENST00000580554 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
NCOR1-219ENST00000580554 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
NCOR1-219ENST00000580554 PBRM1Q86U86 1689 aa13.14□□□□□ -0.31
NCOR1-219ENST00000580554 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
NCOR1-219ENST00000580554 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
NCOR1-219ENST00000580554 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
NCOR1-219ENST00000580554 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
NCOR1-219ENST00000580554 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
NCOR1-219ENST00000580554 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
NCOR1-219ENST00000580554 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.32
NCOR1-219ENST00000580554 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
NCOR1-219ENST00000580554 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
NCOR1-219ENST00000580554 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
NCOR1-219ENST00000580554 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
NCOR1-219ENST00000580554 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
NCOR1-219ENST00000580554 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
NCOR1-219ENST00000580554 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
NCOR1-219ENST00000580554 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
NCOR1-219ENST00000580554 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.33
NCOR1-219ENST00000580554 NUP160Q12769 1436 aa12.94□□□□□ -0.34
NCOR1-219ENST00000580554 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
NCOR1-219ENST00000580554 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
NCOR1-219ENST00000580554 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
NCOR1-219ENST00000580554 IGF1RP08069 1367 aa12.86□□□□□ -0.35
NCOR1-219ENST00000580554 FKBP8Q14318 412 aa12.86□□□□□ -0.35
NCOR1-219ENST00000580554 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
NCOR1-219ENST00000580554 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
NCOR1-219ENST00000580554 CUL7Q14999 1698 aa12.82□□□□□ -0.36
NCOR1-219ENST00000580554 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
NCOR1-219ENST00000580554 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
NCOR1-219ENST00000580554 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
NCOR1-219ENST00000580554 KIAA0586Q9BVV6 1533 aa12.76□□□□□ -0.37
NCOR1-219ENST00000580554 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
NCOR1-219ENST00000580554 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
NCOR1-219ENST00000580554 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
NCOR1-219ENST00000580554 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
NCOR1-219ENST00000580554 IQGAP2Q13576 1575 aa12.67□□□□□ -0.38
NCOR1-219ENST00000580554 RAPGEF2Q9Y4G8 1499 aa12.66□□□□□ -0.38
NCOR1-219ENST00000580554 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
NCOR1-219ENST00000580554 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
NCOR1-219ENST00000580554 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
NCOR1-219ENST00000580554 PTPRGP23470 1445 aa12.62□□□□□ -0.39
NCOR1-219ENST00000580554 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
NCOR1-219ENST00000580554 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
NCOR1-219ENST00000580554 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
NCOR1-219ENST00000580554 PROM2Q8N271 834 aa12.61□□□□□ -0.39
NCOR1-219ENST00000580554 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
NCOR1-219ENST00000580554 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
NCOR1-219ENST00000580554 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
NCOR1-219ENST00000580554 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
NCOR1-219ENST00000580554 UGGT2Q9NYU1 1516 aa12.58□□□□□ -0.4
NCOR1-219ENST00000580554 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
NCOR1-219ENST00000580554 CTTNBP2Q8WZ74 1663 aa12.57□□□□□ -0.4
NCOR1-219ENST00000580554 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
NCOR1-219ENST00000580554 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
NCOR1-219ENST00000580554 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
NCOR1-219ENST00000580554 KIAA0556O60303 1618 aa12.56□□□□□ -0.4
NCOR1-219ENST00000580554 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
NCOR1-219ENST00000580554 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
NCOR1-219ENST00000580554 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
NCOR1-219ENST00000580554 ASXL2Q76L83 1435 aa12.5□□□□□ -0.41
NCOR1-219ENST00000580554 FAM9AQ8IZU1 332 aaPredicted RBP12.49□□□□□ -0.41
NCOR1-219ENST00000580554 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
NCOR1-219ENST00000580554 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
NCOR1-219ENST00000580554 PLB1Q6P1J6 1458 aa12.48□□□□□ -0.41
NCOR1-219ENST00000580554 GOLGA3Q08378 1498 aa12.47□□□□□ -0.41
NCOR1-219ENST00000580554 ZCCHC11Q5TAX3 1644 aaKnown RBP12.47□□□□□ -0.41
NCOR1-219ENST00000580554 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
NCOR1-219ENST00000580554 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
NCOR1-219ENST00000580554 EEA1Q15075 1411 aa12.45□□□□□ -0.42
NCOR1-219ENST00000580554 ABCA8O94911 1581 aa12.43□□□□□ -0.42
NCOR1-219ENST00000580554 KDM6BO15054 1643 aa12.42□□□□□ -0.42
NCOR1-219ENST00000580554 RANGAP1P46060 587 aaPredicted RBP12.42□□□□□ -0.42
NCOR1-219ENST00000580554 GLI2P10070 1586 aa12.42□□□□□ -0.42
NCOR1-219ENST00000580554 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
NCOR1-219ENST00000580554 PPRC1Q5VV67 1664 aaKnown RBP12.42□□□□□ -0.42
NCOR1-219ENST00000580554 SAMD9Q5K651 1589 aa12.4□□□□□ -0.42
NCOR1-219ENST00000580554 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms