RNA–Protein interactions for RNA: ENST00000580500.5

LINC00511-209, long intergenic non-protein coding RNA 511, humanhuman

TSL 4

Gene LINC00511, Length 561 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-209ENST00000580500 FXR2P51116 673 aaKnown RBP eCLIP19.38■□□□□ 0.69
LINC00511-209ENST00000580500 ZNF692Q9BU19 519 aaPredicted RBP19.34■□□□□ 0.69
LINC00511-209ENST00000580500 SSUH2Q9Y2M2 353 aa19.34■□□□□ 0.69
LINC00511-209ENST00000580500 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
LINC00511-209ENST00000580500 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
LINC00511-209ENST00000580500 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
LINC00511-209ENST00000580500 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
LINC00511-209ENST00000580500 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
LINC00511-209ENST00000580500 SPDYE1Q8NFV5 336 aaPredicted RBP19.24■□□□□ 0.67
LINC00511-209ENST00000580500 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
LINC00511-209ENST00000580500 WDR62O43379 1518 aa19.23■□□□□ 0.67
LINC00511-209ENST00000580500 SP7Q8TDD2 431 aaPredicted RBP19.16■□□□□ 0.66
LINC00511-209ENST00000580500 CLEC11AQ9Y240 323 aa19.16■□□□□ 0.66
LINC00511-209ENST00000580500 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
LINC00511-209ENST00000580500 HAX1O00165 279 aa19.09■□□□□ 0.65
LINC00511-209ENST00000580500 PRKAR2AP13861 404 aaKnown RBP19.01■□□□□ 0.63
LINC00511-209ENST00000580500 TOPBP1Q92547 1522 aa19■□□□□ 0.63
LINC00511-209ENST00000580500 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
LINC00511-209ENST00000580500 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
LINC00511-209ENST00000580500 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
LINC00511-209ENST00000580500 PRR29P0C7W0 189 aa18.88■□□□□ 0.61
LINC00511-209ENST00000580500 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
LINC00511-209ENST00000580500 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
LINC00511-209ENST00000580500 EVX2Q03828 476 aa18.84■□□□□ 0.61
LINC00511-209ENST00000580500 CUX1P39880 1505 aa18.84■□□□□ 0.61
LINC00511-209ENST00000580500 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
LINC00511-209ENST00000580500 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
LINC00511-209ENST00000580500 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
LINC00511-209ENST00000580500 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
LINC00511-209ENST00000580500 CHADLQ6NUI6 762 aa18.77■□□□□ 0.6
LINC00511-209ENST00000580500 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
LINC00511-209ENST00000580500 C19orf67A6NJJ6 358 aa18.75■□□□□ 0.59
LINC00511-209ENST00000580500 SOGA1O94964 1423 aa18.74■□□□□ 0.59
LINC00511-209ENST00000580500 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC00511-209ENST00000580500 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
LINC00511-209ENST00000580500 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
LINC00511-209ENST00000580500 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
LINC00511-209ENST00000580500 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
LINC00511-209ENST00000580500 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
LINC00511-209ENST00000580500 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
LINC00511-209ENST00000580500 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
LINC00511-209ENST00000580500 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
LINC00511-209ENST00000580500 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.56
LINC00511-209ENST00000580500 CHD1O14646 1710 aa18.57■□□□□ 0.56
LINC00511-209ENST00000580500 FARP1Q9Y4F1 1045 aaPredicted RBP18.55■□□□□ 0.56
LINC00511-209ENST00000580500 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
LINC00511-209ENST00000580500 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
LINC00511-209ENST00000580500 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
LINC00511-209ENST00000580500 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
LINC00511-209ENST00000580500 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
LINC00511-209ENST00000580500 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
LINC00511-209ENST00000580500 GABBR2O75899 941 aa18.45■□□□□ 0.54
LINC00511-209ENST00000580500 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
LINC00511-209ENST00000580500 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
LINC00511-209ENST00000580500 CD44P16070 742 aaKnown RBP18.41■□□□□ 0.54
LINC00511-209ENST00000580500 CREBZFQ9NS37 354 aa18.4■□□□□ 0.54
LINC00511-209ENST00000580500 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
LINC00511-209ENST00000580500 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
LINC00511-209ENST00000580500 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
LINC00511-209ENST00000580500 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
LINC00511-209ENST00000580500 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
LINC00511-209ENST00000580500 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
LINC00511-209ENST00000580500 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
LINC00511-209ENST00000580500 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
LINC00511-209ENST00000580500 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
LINC00511-209ENST00000580500 CLCN6P51797 869 aa18.29■□□□□ 0.52
LINC00511-209ENST00000580500 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
LINC00511-209ENST00000580500 PROM2Q8N271 834 aa18.26■□□□□ 0.51
LINC00511-209ENST00000580500 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
LINC00511-209ENST00000580500 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
LINC00511-209ENST00000580500 IGF1RP08069 1367 aa18.23■□□□□ 0.51
LINC00511-209ENST00000580500 NUP160Q12769 1436 aa18.22■□□□□ 0.51
LINC00511-209ENST00000580500 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
LINC00511-209ENST00000580500 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
LINC00511-209ENST00000580500 ZNF579Q8NAF0 562 aaKnown RBP18.16■□□□□ 0.5
LINC00511-209ENST00000580500 CUL7Q14999 1698 aa18.15■□□□□ 0.5
LINC00511-209ENST00000580500 ZRANB1Q9UGI0 708 aa18.15■□□□□ 0.5
LINC00511-209ENST00000580500 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
LINC00511-209ENST00000580500 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
LINC00511-209ENST00000580500 MNX1P50219 401 aaPredicted RBP18.12■□□□□ 0.49
LINC00511-209ENST00000580500 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
LINC00511-209ENST00000580500 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00511-209ENST00000580500 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
LINC00511-209ENST00000580500 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
LINC00511-209ENST00000580500 POTEIP0CG38 1075 aa18.04■□□□□ 0.48
LINC00511-209ENST00000580500 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
LINC00511-209ENST00000580500 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
LINC00511-209ENST00000580500 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
LINC00511-209ENST00000580500 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
LINC00511-209ENST00000580500 LHX8Q68G74 356 aa17.96■□□□□ 0.47
LINC00511-209ENST00000580500 DCBLD2Q96PD2 775 aa17.96■□□□□ 0.47
LINC00511-209ENST00000580500 IQGAP2Q13576 1575 aa17.9■□□□□ 0.46
LINC00511-209ENST00000580500 PRXQ9BXM0 1461 aa17.89■□□□□ 0.45
LINC00511-209ENST00000580500 GALR2O43603 387 aaPredicted RBP17.89■□□□□ 0.45
LINC00511-209ENST00000580500 PHF12Q96QT6 1004 aa17.87■□□□□ 0.45
LINC00511-209ENST00000580500 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.45
LINC00511-209ENST00000580500 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
LINC00511-209ENST00000580500 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
LINC00511-209ENST00000580500 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
LINC00511-209ENST00000580500 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms