RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 PHLDB1Q86UU1 1377 aa18.93■□□□□ 0.62
RBFOX3-202ENST00000578998 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
RBFOX3-202ENST00000578998 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
RBFOX3-202ENST00000578998 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
RBFOX3-202ENST00000578998 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
RBFOX3-202ENST00000578998 BCANQ96GW7 911 aa18.86■□□□□ 0.61
RBFOX3-202ENST00000578998 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
RBFOX3-202ENST00000578998 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
RBFOX3-202ENST00000578998 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
RBFOX3-202ENST00000578998 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
RBFOX3-202ENST00000578998 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
RBFOX3-202ENST00000578998 NESP48681 1621 aa18.77■□□□□ 0.6
RBFOX3-202ENST00000578998 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
RBFOX3-202ENST00000578998 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
RBFOX3-202ENST00000578998 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
RBFOX3-202ENST00000578998 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
RBFOX3-202ENST00000578998 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
RBFOX3-202ENST00000578998 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
RBFOX3-202ENST00000578998 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
RBFOX3-202ENST00000578998 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
RBFOX3-202ENST00000578998 FKBP8Q14318 412 aa18.68■□□□□ 0.58
RBFOX3-202ENST00000578998 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
RBFOX3-202ENST00000578998 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
RBFOX3-202ENST00000578998 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
RBFOX3-202ENST00000578998 TONSLQ96HA7 1378 aa18.65■□□□□ 0.58
RBFOX3-202ENST00000578998 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
RBFOX3-202ENST00000578998 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
RBFOX3-202ENST00000578998 RRP7BPQ9NSQ0 103 aa18.64■□□□□ 0.57
RBFOX3-202ENST00000578998 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
RBFOX3-202ENST00000578998 ANP32CO43423 234 aa18.63■□□□□ 0.57
RBFOX3-202ENST00000578998 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
RBFOX3-202ENST00000578998 TSHZ2Q9NRE2 1034 aa18.58■□□□□ 0.57
RBFOX3-202ENST00000578998 FGD6Q6ZV73 1430 aa18.58■□□□□ 0.56
RBFOX3-202ENST00000578998 ABCA10Q8WWZ4 1543 aa18.57■□□□□ 0.56
RBFOX3-202ENST00000578998 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
RBFOX3-202ENST00000578998 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
RBFOX3-202ENST00000578998 PTPRKQ15262 1439 aa18.56■□□□□ 0.56
RBFOX3-202ENST00000578998 CFAP43Q8NDM7 1665 aa18.56■□□□□ 0.56
RBFOX3-202ENST00000578998 MYT1Q01538 1121 aa18.55■□□□□ 0.56
RBFOX3-202ENST00000578998 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
RBFOX3-202ENST00000578998 CCDC18Q5T9S5 1454 aa18.54■□□□□ 0.56
RBFOX3-202ENST00000578998 NEFLP07196 543 aa18.53■□□□□ 0.56
RBFOX3-202ENST00000578998 FOXD1Q16676 465 aa18.51■□□□□ 0.55
RBFOX3-202ENST00000578998 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
RBFOX3-202ENST00000578998 EFCAB5A4FU69 1503 aa18.48■□□□□ 0.55
RBFOX3-202ENST00000578998 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
RBFOX3-202ENST00000578998 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
RBFOX3-202ENST00000578998 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
RBFOX3-202ENST00000578998 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
RBFOX3-202ENST00000578998 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.55
RBFOX3-202ENST00000578998 AQRO60306 1485 aaKnown RBP eCLIP18.45■□□□□ 0.54
RBFOX3-202ENST00000578998 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
RBFOX3-202ENST00000578998 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
RBFOX3-202ENST00000578998 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
RBFOX3-202ENST00000578998 NAIPQ13075 1403 aa18.42■□□□□ 0.54
RBFOX3-202ENST00000578998 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
RBFOX3-202ENST00000578998 CTTNBP2Q8WZ74 1663 aa18.42■□□□□ 0.54
RBFOX3-202ENST00000578998 CUL7Q14999 1698 aa18.41■□□□□ 0.54
RBFOX3-202ENST00000578998 HFM1A2PYH4 1435 aa18.41■□□□□ 0.54
RBFOX3-202ENST00000578998 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
RBFOX3-202ENST00000578998 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
RBFOX3-202ENST00000578998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.4■□□□□ 0.54
RBFOX3-202ENST00000578998 PTPN23Q9H3S7 1636 aa18.37■□□□□ 0.53
RBFOX3-202ENST00000578998 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
RBFOX3-202ENST00000578998 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
RBFOX3-202ENST00000578998 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.53
RBFOX3-202ENST00000578998 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.52
RBFOX3-202ENST00000578998 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
RBFOX3-202ENST00000578998 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
RBFOX3-202ENST00000578998 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
RBFOX3-202ENST00000578998 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
RBFOX3-202ENST00000578998 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
RBFOX3-202ENST00000578998 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
RBFOX3-202ENST00000578998 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
RBFOX3-202ENST00000578998 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
RBFOX3-202ENST00000578998 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
RBFOX3-202ENST00000578998 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
RBFOX3-202ENST00000578998 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
RBFOX3-202ENST00000578998 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
RBFOX3-202ENST00000578998 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
RBFOX3-202ENST00000578998 SAMD9Q5K651 1589 aa18.27■□□□□ 0.52
RBFOX3-202ENST00000578998 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.51
RBFOX3-202ENST00000578998 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
RBFOX3-202ENST00000578998 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
RBFOX3-202ENST00000578998 LAMC3Q9Y6N6 1575 aa18.26■□□□□ 0.51
RBFOX3-202ENST00000578998 RBM19Q9Y4C8 960 aaKnown RBP18.25■□□□□ 0.51
RBFOX3-202ENST00000578998 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
RBFOX3-202ENST00000578998 FBLN2P98095 1184 aa18.24■□□□□ 0.51
RBFOX3-202ENST00000578998 KDM6BO15054 1643 aa18.23■□□□□ 0.51
RBFOX3-202ENST00000578998 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
RBFOX3-202ENST00000578998 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
RBFOX3-202ENST00000578998 NBPF8Q3BBV2 869 aa18.21■□□□□ 0.51
RBFOX3-202ENST00000578998 EPRSP07814 1512 aaKnown RBP18.21■□□□□ 0.51
RBFOX3-202ENST00000578998 MRS2Q9HD23 443 aa18.21■□□□□ 0.51
RBFOX3-202ENST00000578998 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
RBFOX3-202ENST00000578998 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
RBFOX3-202ENST00000578998 DENND4BO75064 1496 aaPredicted RBP18.18■□□□□ 0.5
RBFOX3-202ENST00000578998 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
RBFOX3-202ENST00000578998 IQGAP2Q13576 1575 aa18.14■□□□□ 0.49
RBFOX3-202ENST00000578998 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms