RNA–Protein interactions for RNA: ENST00000576585.1

PRPF8-214, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 2,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-214ENST00000576585 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
PRPF8-214ENST00000576585 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
PRPF8-214ENST00000576585 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
PRPF8-214ENST00000576585 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.823e-6■■□□□ 12.9
PRPF8-214ENST00000576585 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
PRPF8-214ENST00000576585 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
PRPF8-214ENST00000576585 IGF1RP08069 1367 aa20.1■□□□□ 0.81
PRPF8-214ENST00000576585 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
PRPF8-214ENST00000576585 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.8
PRPF8-214ENST00000576585 GRIN2BQ13224 1484 aa20.08■□□□□ 0.8
PRPF8-214ENST00000576585 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
PRPF8-214ENST00000576585 KIF21BO75037 1637 aa19.99■□□□□ 0.79
PRPF8-214ENST00000576585 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
PRPF8-214ENST00000576585 CUL7Q14999 1698 aa19.99■□□□□ 0.79
PRPF8-214ENST00000576585 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
PRPF8-214ENST00000576585 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
PRPF8-214ENST00000576585 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
PRPF8-214ENST00000576585 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
PRPF8-214ENST00000576585 FBXO3Q9UK99 471 aa19.97■□□□□ 0.79
PRPF8-214ENST00000576585 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
PRPF8-214ENST00000576585 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
PRPF8-214ENST00000576585 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
PRPF8-214ENST00000576585 PDIA4P13667 645 aaKnown RBP19.94■□□□□ 0.78
PRPF8-214ENST00000576585 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
PRPF8-214ENST00000576585 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
PRPF8-214ENST00000576585 UBE2Q2Q8WVN8 375 aa19.91■□□□□ 0.78
PRPF8-214ENST00000576585 PLCB2Q00722 1185 aa19.9■□□□□ 0.78
PRPF8-214ENST00000576585 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
PRPF8-214ENST00000576585 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
PRPF8-214ENST00000576585 GRIN2AQ12879 1464 aa19.82■□□□□ 0.76
PRPF8-214ENST00000576585 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
PRPF8-214ENST00000576585 CHD1O14646 1710 aa19.8■□□□□ 0.76
PRPF8-214ENST00000576585 TMEM132AQ24JP5 1023 aa19.79■□□□□ 0.76
PRPF8-214ENST00000576585 FBLN2P98095 1184 aa19.75■□□□□ 0.75
PRPF8-214ENST00000576585 NUP160Q12769 1436 aa19.74■□□□□ 0.75
PRPF8-214ENST00000576585 HAP1P54257 671 aaPredicted RBP19.72■□□□□ 0.75
PRPF8-214ENST00000576585 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
PRPF8-214ENST00000576585 CLIP1P30622 1438 aa19.71■□□□□ 0.75
PRPF8-214ENST00000576585 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
PRPF8-214ENST00000576585 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
PRPF8-214ENST00000576585 KIAA0586Q9BVV6 1533 aa19.66■□□□□ 0.74
PRPF8-214ENST00000576585 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
PRPF8-214ENST00000576585 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
PRPF8-214ENST00000576585 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
PRPF8-214ENST00000576585 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
PRPF8-214ENST00000576585 PDE4CQ08493 712 aa19.6■□□□□ 0.73
PRPF8-214ENST00000576585 HRCP23327 699 aa19.59■□□□□ 0.73
PRPF8-214ENST00000576585 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
PRPF8-214ENST00000576585 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
PRPF8-214ENST00000576585 CHMP4AQ9BY43 222 aa19.55■□□□□ 0.72
PRPF8-214ENST00000576585 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
PRPF8-214ENST00000576585 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
PRPF8-214ENST00000576585 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
PRPF8-214ENST00000576585 ARAP1Q96P48 1450 aa19.52■□□□□ 0.72
PRPF8-214ENST00000576585 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
PRPF8-214ENST00000576585 VPS8Q8N3P4 1428 aa19.52■□□□□ 0.71
PRPF8-214ENST00000576585 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
PRPF8-214ENST00000576585 NEFLP07196 543 aa19.5■□□□□ 0.71
PRPF8-214ENST00000576585 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
PRPF8-214ENST00000576585 PKNOX2Q96KN3 472 aa19.48■□□□□ 0.71
PRPF8-214ENST00000576585 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
PRPF8-214ENST00000576585 DISP1Q96F81 1524 aa19.46■□□□□ 0.71
PRPF8-214ENST00000576585 PRG4Q92954 1404 aaPredicted RBP19.43■□□□□ 0.7
PRPF8-214ENST00000576585 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
PRPF8-214ENST00000576585 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
PRPF8-214ENST00000576585 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
PRPF8-214ENST00000576585 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
PRPF8-214ENST00000576585 SAMD1Q6SPF0 538 aaPredicted RBP19.38■□□□□ 0.69
PRPF8-214ENST00000576585 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
PRPF8-214ENST00000576585 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
PRPF8-214ENST00000576585 FHOD3Q2V2M9 1422 aa19.35■□□□□ 0.69
PRPF8-214ENST00000576585 BRD2P25440 801 aaKnown RBP19.34■□□□□ 0.69
PRPF8-214ENST00000576585 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
PRPF8-214ENST00000576585 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
PRPF8-214ENST00000576585 CDK11BP21127 795 aaKnown RBP19.29■□□□□ 0.68
PRPF8-214ENST00000576585 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
PRPF8-214ENST00000576585 ARHGEF11O15085 1522 aa19.29■□□□□ 0.68
PRPF8-214ENST00000576585 DHX37Q8IY37 1157 aaKnown RBP19.27■□□□□ 0.68
PRPF8-214ENST00000576585 PTPRGP23470 1445 aa19.26■□□□□ 0.67
PRPF8-214ENST00000576585 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
PRPF8-214ENST00000576585 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
PRPF8-214ENST00000576585 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
PRPF8-214ENST00000576585 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
PRPF8-214ENST00000576585 PCF11O94913 1555 aaKnown RBP19.22■□□□□ 0.67
PRPF8-214ENST00000576585 KANK4Q5T7N3 995 aaPredicted RBP19.22■□□□□ 0.67
PRPF8-214ENST00000576585 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
PRPF8-214ENST00000576585 ABCA8O94911 1581 aa19.2■□□□□ 0.66
PRPF8-214ENST00000576585 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
PRPF8-214ENST00000576585 PLB1Q6P1J6 1458 aa19.18■□□□□ 0.66
PRPF8-214ENST00000576585 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
PRPF8-214ENST00000576585 RAPGEF6Q8TEU7 1601 aa19.17■□□□□ 0.66
PRPF8-214ENST00000576585 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
PRPF8-214ENST00000576585 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
PRPF8-214ENST00000576585 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
PRPF8-214ENST00000576585 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
PRPF8-214ENST00000576585 UHRF1BP1LA0JNW5 1464 aa19.14■□□□□ 0.65
PRPF8-214ENST00000576585 HECW1Q76N89 1606 aa19.12■□□□□ 0.65
PRPF8-214ENST00000576585 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
PRPF8-214ENST00000576585 NUP153P49790 1475 aaKnown RBP19.11■□□□□ 0.65
PRPF8-214ENST00000576585 MAP3K1Q13233 1512 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms