RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
CTDNEP1-204ENST00000570484 TDRD9Q8NDG6 1382 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-204ENST00000570484 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-204ENST00000570484 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-204ENST00000570484 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
CTDNEP1-204ENST00000570484 GRIN2BQ13224 1484 aa10.82□□□□□ -0.68
CTDNEP1-204ENST00000570484 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.684e-6■■■■□ 19.5
CTDNEP1-204ENST00000570484 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
CTDNEP1-204ENST00000570484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
CTDNEP1-204ENST00000570484 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-204ENST00000570484 PBRM1Q86U86 1689 aa10.79□□□□□ -0.68
CTDNEP1-204ENST00000570484 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
CTDNEP1-204ENST00000570484 CUL7Q14999 1698 aa10.79□□□□□ -0.68
CTDNEP1-204ENST00000570484 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
CTDNEP1-204ENST00000570484 MAGI1Q96QZ7 1491 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-204ENST00000570484 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-204ENST00000570484 ADAMTS12P58397 1594 aa10.76□□□□□ -0.69
CTDNEP1-204ENST00000570484 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
CTDNEP1-204ENST00000570484 IGF1RP08069 1367 aa10.74□□□□□ -0.69
CTDNEP1-204ENST00000570484 FHAD1B1AJZ9 1412 aa10.74□□□□□ -0.69
CTDNEP1-204ENST00000570484 KIF21BO75037 1637 aa10.73□□□□□ -0.69
CTDNEP1-204ENST00000570484 CARMIL1Q5VZK9 1371 aa10.73□□□□□ -0.69
CTDNEP1-204ENST00000570484 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
CTDNEP1-204ENST00000570484 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
CTDNEP1-204ENST00000570484 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
CTDNEP1-204ENST00000570484 RAPGEF2Q9Y4G8 1499 aa10.72□□□□□ -0.69
CTDNEP1-204ENST00000570484 SYNJ2O15056 1496 aa10.71□□□□□ -0.69
CTDNEP1-204ENST00000570484 FBLN2P98095 1184 aa10.68□□□□□ -0.7
CTDNEP1-204ENST00000570484 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
CTDNEP1-204ENST00000570484 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
CTDNEP1-204ENST00000570484 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
CTDNEP1-204ENST00000570484 UBTFP17480 764 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-204ENST00000570484 APLP2Q06481 763 aa10.63□□□□□ -0.71
CTDNEP1-204ENST00000570484 CHD1O14646 1710 aa10.61□□□□□ -0.71
CTDNEP1-204ENST00000570484 NUP160Q12769 1436 aa10.59□□□□□ -0.71
CTDNEP1-204ENST00000570484 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
CTDNEP1-204ENST00000570484 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
CTDNEP1-204ENST00000570484 CTTNBP2Q8WZ74 1663 aa10.59□□□□□ -0.71
CTDNEP1-204ENST00000570484 IQGAP2Q13576 1575 aa10.58□□□□□ -0.72
CTDNEP1-204ENST00000570484 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
CTDNEP1-204ENST00000570484 KIAA0586Q9BVV6 1533 aa10.57□□□□□ -0.72
CTDNEP1-204ENST00000570484 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
CTDNEP1-204ENST00000570484 RANGAP1P46060 587 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-204ENST00000570484 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-204ENST00000570484 EFCAB5A4FU69 1503 aa10.53□□□□□ -0.72
CTDNEP1-204ENST00000570484 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
CTDNEP1-204ENST00000570484 CLIP1P30622 1438 aa10.52□□□□□ -0.73
CTDNEP1-204ENST00000570484 OSCARQ8IYS5 282 aa10.51□□□□□ -0.73
CTDNEP1-204ENST00000570484 UGGT2Q9NYU1 1516 aa10.5□□□□□ -0.73
CTDNEP1-204ENST00000570484 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
CTDNEP1-204ENST00000570484 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
CTDNEP1-204ENST00000570484 SAMD9Q5K651 1589 aa10.47□□□□□ -0.73
CTDNEP1-204ENST00000570484 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
CTDNEP1-204ENST00000570484 PRG4Q92954 1404 aaPredicted RBP10.46□□□□□ -0.74
CTDNEP1-204ENST00000570484 SHROOM2Q13796 1616 aa10.46□□□□□ -0.74
CTDNEP1-204ENST00000570484 ARHGAP35Q9NRY4 1499 aa10.45□□□□□ -0.74
CTDNEP1-204ENST00000570484 JPH4Q96JJ6 628 aa10.45□□□□□ -0.74
CTDNEP1-204ENST00000570484 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
CTDNEP1-204ENST00000570484 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
CTDNEP1-204ENST00000570484 ARAP1Q96P48 1450 aa10.42□□□□□ -0.74
CTDNEP1-204ENST00000570484 FMN1Q68DA7 1419 aa10.42□□□□□ -0.74
CTDNEP1-204ENST00000570484 CAPN15O75808 1086 aa10.42□□□□□ -0.74
CTDNEP1-204ENST00000570484 P3H3Q8IVL6 736 aa10.42□□□□□ -0.74
CTDNEP1-204ENST00000570484 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-204ENST00000570484 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-204ENST00000570484 VPS8Q8N3P4 1428 aa10.4□□□□□ -0.75
CTDNEP1-204ENST00000570484 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
CTDNEP1-204ENST00000570484 PCF11O94913 1555 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-204ENST00000570484 PTPRGP23470 1445 aa10.37□□□□□ -0.75
CTDNEP1-204ENST00000570484 ERCC6L2Q5T890 1561 aa10.37□□□□□ -0.75
CTDNEP1-204ENST00000570484 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
CTDNEP1-204ENST00000570484 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
CTDNEP1-204ENST00000570484 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
CTDNEP1-204ENST00000570484 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 RAPGEF6Q8TEU7 1601 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 DSG3P32926 999 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 POLA2Q14181 598 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
CTDNEP1-204ENST00000570484 CCDC18Q5T9S5 1454 aa10.32□□□□□ -0.76
CTDNEP1-204ENST00000570484 PLB1Q6P1J6 1458 aa10.32□□□□□ -0.76
CTDNEP1-204ENST00000570484 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
CTDNEP1-204ENST00000570484 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
CTDNEP1-204ENST00000570484 ABCA8O94911 1581 aa10.31□□□□□ -0.76
CTDNEP1-204ENST00000570484 UHRF1BP1LA0JNW5 1464 aa10.28□□□□□ -0.76
CTDNEP1-204ENST00000570484 NUP153P49790 1475 aaKnown RBP10.28□□□□□ -0.76
CTDNEP1-204ENST00000570484 EPRSP07814 1512 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-204ENST00000570484 CFAP43Q8NDM7 1665 aa10.26□□□□□ -0.77
CTDNEP1-204ENST00000570484 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
CTDNEP1-204ENST00000570484 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-204ENST00000570484 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
CTDNEP1-204ENST00000570484 CDK13Q14004 1512 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-204ENST00000570484 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
CTDNEP1-204ENST00000570484 MAP3K1Q13233 1512 aa10.23□□□□□ -0.77
CTDNEP1-204ENST00000570484 ABCB7O75027 752 aa10.23□□□□□ -0.77
CTDNEP1-204ENST00000570484 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
CTDNEP1-204ENST00000570484 CYB5RLQ6IPT4 315 aa10.23□□□□□ -0.77
CTDNEP1-204ENST00000570484 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-204ENST00000570484 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms