RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
INO80E-213ENST00000569957 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
INO80E-213ENST00000569957 CUX1P39880 1505 aa17.67■□□□□ 0.42
INO80E-213ENST00000569957 ERICH3Q5RHP9 1530 aa17.63■□□□□ 0.41
INO80E-213ENST00000569957 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
INO80E-213ENST00000569957 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
INO80E-213ENST00000569957 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
INO80E-213ENST00000569957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.416e-7■□□□□ 10.3
INO80E-213ENST00000569957 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
INO80E-213ENST00000569957 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
INO80E-213ENST00000569957 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.41
INO80E-213ENST00000569957 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
INO80E-213ENST00000569957 MIER1Q8N108 512 aa17.57■□□□□ 0.4
INO80E-213ENST00000569957 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
INO80E-213ENST00000569957 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
INO80E-213ENST00000569957 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
INO80E-213ENST00000569957 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
INO80E-213ENST00000569957 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
INO80E-213ENST00000569957 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
INO80E-213ENST00000569957 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
INO80E-213ENST00000569957 CHGAP10645 457 aaKnown RBP17.51■□□□□ 0.39
INO80E-213ENST00000569957 SENP3-EIF4A1A0A087X0R7 540 aa17.51■□□□□ 0.39
INO80E-213ENST00000569957 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
INO80E-213ENST00000569957 CLSPNQ9HAW4 1339 aa17.51■□□□□ 0.39
INO80E-213ENST00000569957 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
INO80E-213ENST00000569957 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
INO80E-213ENST00000569957 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
INO80E-213ENST00000569957 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
INO80E-213ENST00000569957 IGF1RP08069 1367 aa17.46■□□□□ 0.38
INO80E-213ENST00000569957 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
INO80E-213ENST00000569957 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
INO80E-213ENST00000569957 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
INO80E-213ENST00000569957 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
INO80E-213ENST00000569957 NESP48681 1621 aa17.42■□□□□ 0.38
INO80E-213ENST00000569957 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
INO80E-213ENST00000569957 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
INO80E-213ENST00000569957 HNRNPUQ00839 825 aaKnown RBP eCLIP17.4■□□□□ 0.381e-7■■□□□ 13.2
INO80E-213ENST00000569957 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
INO80E-213ENST00000569957 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
INO80E-213ENST00000569957 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
INO80E-213ENST00000569957 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
INO80E-213ENST00000569957 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
INO80E-213ENST00000569957 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
INO80E-213ENST00000569957 FKBP8Q14318 412 aa17.35■□□□□ 0.37
INO80E-213ENST00000569957 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
INO80E-213ENST00000569957 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
INO80E-213ENST00000569957 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
INO80E-213ENST00000569957 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
INO80E-213ENST00000569957 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
INO80E-213ENST00000569957 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
INO80E-213ENST00000569957 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
INO80E-213ENST00000569957 CUL7Q14999 1698 aa17.28■□□□□ 0.36
INO80E-213ENST00000569957 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
INO80E-213ENST00000569957 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
INO80E-213ENST00000569957 FHOD3Q2V2M9 1422 aa17.25■□□□□ 0.35
INO80E-213ENST00000569957 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
INO80E-213ENST00000569957 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
INO80E-213ENST00000569957 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
INO80E-213ENST00000569957 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
INO80E-213ENST00000569957 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
INO80E-213ENST00000569957 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
INO80E-213ENST00000569957 FOXD1Q16676 465 aa17.21■□□□□ 0.35
INO80E-213ENST00000569957 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
INO80E-213ENST00000569957 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
INO80E-213ENST00000569957 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
INO80E-213ENST00000569957 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
INO80E-213ENST00000569957 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
INO80E-213ENST00000569957 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■■■■■ 40.7
INO80E-213ENST00000569957 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
INO80E-213ENST00000569957 CANXP27824 592 aaKnown RBP17.13■□□□□ 0.33
INO80E-213ENST00000569957 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
INO80E-213ENST00000569957 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
INO80E-213ENST00000569957 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
INO80E-213ENST00000569957 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
INO80E-213ENST00000569957 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
INO80E-213ENST00000569957 NPM2Q86SE8 214 aaKnown RBP17.08■□□□□ 0.32
INO80E-213ENST00000569957 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
INO80E-213ENST00000569957 CASKIN1Q8WXD9 1431 aa17.06■□□□□ 0.32
INO80E-213ENST00000569957 ABCA5Q8WWZ7 1642 aa17.04■□□□□ 0.32
INO80E-213ENST00000569957 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
INO80E-213ENST00000569957 RRBP1Q9P2E9 1410 aaKnown RBP17.03■□□□□ 0.32
INO80E-213ENST00000569957 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.32
INO80E-213ENST00000569957 CTTNBP2Q8WZ74 1663 aa17.02■□□□□ 0.32
INO80E-213ENST00000569957 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.31
INO80E-213ENST00000569957 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.31
INO80E-213ENST00000569957 ANP32EQ9BTT0 268 aa17■□□□□ 0.31
INO80E-213ENST00000569957 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
INO80E-213ENST00000569957 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
INO80E-213ENST00000569957 NEFMP07197 916 aa16.97■□□□□ 0.31
INO80E-213ENST00000569957 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
INO80E-213ENST00000569957 WDR62O43379 1518 aa16.96■□□□□ 0.31
INO80E-213ENST00000569957 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
INO80E-213ENST00000569957 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
INO80E-213ENST00000569957 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
INO80E-213ENST00000569957 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
INO80E-213ENST00000569957 CCDC136Q96JN2 1154 aa16.93■□□□□ 0.3
INO80E-213ENST00000569957 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
INO80E-213ENST00000569957 PKD2Q13563 968 aa16.92■□□□□ 0.3
INO80E-213ENST00000569957 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
INO80E-213ENST00000569957 PTPRGP23470 1445 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms