RNA–Protein interactions for RNA: ENST00000567010.1

CDR2-205, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 2

Gene CDR2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-205ENST00000567010 KIF21AQ7Z4S6 1674 aa8.57□□□□□ -1.04
CDR2-205ENST00000567010 FAM9AQ8IZU1 332 aaPredicted RBP8.57□□□□□ -1.04
CDR2-205ENST00000567010 MRC2Q9UBG0 1479 aa8.57□□□□□ -1.04
CDR2-205ENST00000567010 URB2Q14146 1524 aaKnown RBP8.56□□□□□ -1.04
CDR2-205ENST00000567010 PROM2Q8N271 834 aa8.56□□□□□ -1.04
CDR2-205ENST00000567010 SOGA1O94964 1423 aa8.55□□□□□ -1.04
CDR2-205ENST00000567010 CUX1P39880 1505 aa8.54□□□□□ -1.04
CDR2-205ENST00000567010 TOPBP1Q92547 1522 aa8.54□□□□□ -1.04
CDR2-205ENST00000567010 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
CDR2-205ENST00000567010 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
CDR2-205ENST00000567010 SYNJ1O43426 1573 aa8.51□□□□□ -1.05
CDR2-205ENST00000567010 DNMBPQ6XZF7 1577 aa8.51□□□□□ -1.05
CDR2-205ENST00000567010 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
CDR2-205ENST00000567010 TDRD9Q8NDG6 1382 aaKnown RBP8.49□□□□□ -1.05
CDR2-205ENST00000567010 TOP2BQ02880 1626 aa8.49□□□□□ -1.05
CDR2-205ENST00000567010 SPDYE2BA6NHP3 402 aa8.48□□□□□ -1.05
CDR2-205ENST00000567010 HAX1O00165 279 aa8.48□□□□□ -1.05
CDR2-205ENST00000567010 SPDYE6P0CI01 402 aa8.48□□□□□ -1.05
CDR2-205ENST00000567010 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
CDR2-205ENST00000567010 POLA1P09884 1462 aaPredicted RBP8.48□□□□□ -1.05
CDR2-205ENST00000567010 WDR62O43379 1518 aa8.48□□□□□ -1.05
CDR2-205ENST00000567010 LHX8Q68G74 356 aa8.47□□□□□ -1.05
CDR2-205ENST00000567010 CUX2O14529 1486 aa8.46□□□□□ -1.05
CDR2-205ENST00000567010 OSCARQ8IYS5 282 aa8.46□□□□□ -1.06
CDR2-205ENST00000567010 FBXO3Q9UK99 471 aa8.46□□□□□ -1.06
CDR2-205ENST00000567010 AQRO60306 1485 aaKnown RBP eCLIP8.45□□□□□ -1.064e-10■■■□□ 16.7
CDR2-205ENST00000567010 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
CDR2-205ENST00000567010 THOC2Q8NI27 1593 aaKnown RBP8.45□□□□□ -1.06
CDR2-205ENST00000567010 BIVM-ERCC5R4GMW8 1640 aa8.45□□□□□ -1.06
CDR2-205ENST00000567010 IFT140Q96RY7 1462 aa8.45□□□□□ -1.06
CDR2-205ENST00000567010 LOC105371045A0A1W2PR82 267 aa8.44□□□□□ -1.06
CDR2-205ENST00000567010 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
CDR2-205ENST00000567010 IGF1RP08069 1367 aa8.43□□□□□ -1.06
CDR2-205ENST00000567010 KIF27Q86VH2 1401 aa8.43□□□□□ -1.06
CDR2-205ENST00000567010 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
CDR2-205ENST00000567010 ABCA10Q8WWZ4 1543 aa8.41□□□□□ -1.06
CDR2-205ENST00000567010 ZNF692Q9BU19 519 aaPredicted RBP8.41□□□□□ -1.06
CDR2-205ENST00000567010 GAPVD1Q14C86 1478 aa8.4□□□□□ -1.06
CDR2-205ENST00000567010 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.06
CDR2-205ENST00000567010 TARBP1Q13395 1621 aaKnown RBP8.4□□□□□ -1.07
CDR2-205ENST00000567010 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
CDR2-205ENST00000567010 PIP4P2Q8N4L2 257 aa8.38□□□□□ -1.07
CDR2-205ENST00000567010 CARMIL1Q5VZK9 1371 aa8.37□□□□□ -1.07
CDR2-205ENST00000567010 AMER1Q5JTC6 1135 aaPredicted RBP8.37□□□□□ -1.07
CDR2-205ENST00000567010 EEA1Q15075 1411 aa8.37□□□□□ -1.07
CDR2-205ENST00000567010 GRIN2BQ13224 1484 aa8.35□□□□□ -1.07
CDR2-205ENST00000567010 EVX2Q03828 476 aa8.35□□□□□ -1.07
CDR2-205ENST00000567010 RANGAP1P46060 587 aaPredicted RBP8.34□□□□□ -1.07
CDR2-205ENST00000567010 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
CDR2-205ENST00000567010 FHAD1B1AJZ9 1412 aa8.3□□□□□ -1.08
CDR2-205ENST00000567010 SNAPC4Q5SXM2 1469 aa8.3□□□□□ -1.08
CDR2-205ENST00000567010 RTN4Q9NQC3 1192 aaKnown RBP8.29□□□□□ -1.08
CDR2-205ENST00000567010 RAPGEF2Q9Y4G8 1499 aa8.29□□□□□ -1.08
CDR2-205ENST00000567010 WDR97A6NE52 1622 aa8.29□□□□□ -1.08
CDR2-205ENST00000567010 ABCA5Q8WWZ7 1642 aa8.29□□□□□ -1.08
CDR2-205ENST00000567010 ERICH3Q5RHP9 1530 aa8.29□□□□□ -1.08
CDR2-205ENST00000567010 EIF4G3O43432 1585 aaKnown RBP8.28□□□□□ -1.08
CDR2-205ENST00000567010 PRXQ9BXM0 1461 aa8.28□□□□□ -1.08
CDR2-205ENST00000567010 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
CDR2-205ENST00000567010 JPH4Q96JJ6 628 aa8.27□□□□□ -1.09
CDR2-205ENST00000567010 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
CDR2-205ENST00000567010 SYNJ2O15056 1496 aa8.26□□□□□ -1.09
CDR2-205ENST00000567010 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
CDR2-205ENST00000567010 AKT1S1Q96B36 256 aa8.25□□□□□ -1.09
CDR2-205ENST00000567010 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
CDR2-205ENST00000567010 PBRM1Q86U86 1689 aa8.24□□□□□ -1.09
CDR2-205ENST00000567010 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
CDR2-205ENST00000567010 GRIN2AQ12879 1464 aa8.22□□□□□ -1.09
CDR2-205ENST00000567010 TTBK1Q5TCY1 1321 aaPredicted RBP8.22□□□□□ -1.09
CDR2-205ENST00000567010 CUL7Q14999 1698 aa8.21□□□□□ -1.1
CDR2-205ENST00000567010 ADAMTS12P58397 1594 aa8.19□□□□□ -1.1
CDR2-205ENST00000567010 KIF21BO75037 1637 aa8.19□□□□□ -1.1
CDR2-205ENST00000567010 FXR2P51116 673 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDR2-205ENST00000567010 IFNLR1Q8IU57 520 aaPredicted RBP8.19□□□□□ -1.1
CDR2-205ENST00000567010 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
CDR2-205ENST00000567010 KIAA0586Q9BVV6 1533 aa8.18□□□□□ -1.1
CDR2-205ENST00000567010 NUP160Q12769 1436 aa8.17□□□□□ -1.1
CDR2-205ENST00000567010 SPDYE1Q8NFV5 336 aaPredicted RBP8.16□□□□□ -1.1
CDR2-205ENST00000567010 CHD1O14646 1710 aa8.15□□□□□ -1.11
CDR2-205ENST00000567010 CEP170Q5SW79 1584 aa8.14□□□□□ -1.11
CDR2-205ENST00000567010 CLIP1P30622 1438 aa8.13□□□□□ -1.11
CDR2-205ENST00000567010 PRG4Q92954 1404 aaPredicted RBP8.13□□□□□ -1.11
CDR2-205ENST00000567010 CYB5RLQ6IPT4 315 aa8.13□□□□□ -1.11
CDR2-205ENST00000567010 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
CDR2-205ENST00000567010 CEP162Q5TB80 1403 aa8.12□□□□□ -1.11
CDR2-205ENST00000567010 PLCD3Q8N3E9 789 aa8.12□□□□□ -1.11
CDR2-205ENST00000567010 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
CDR2-205ENST00000567010 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
CDR2-205ENST00000567010 MIER1Q8N108 512 aa8.1□□□□□ -1.11
CDR2-205ENST00000567010 PTPRGP23470 1445 aa8.1□□□□□ -1.11
CDR2-205ENST00000567010 IQGAP2Q13576 1575 aa8.1□□□□□ -1.11
CDR2-205ENST00000567010 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
CDR2-205ENST00000567010 PLEKHG5O94827 1062 aa8.09□□□□□ -1.11
CDR2-205ENST00000567010 SPOCK2Q92563 424 aa8.09□□□□□ -1.11
CDR2-205ENST00000567010 ZBTB47Q9UFB7 747 aaPredicted RBP8.09□□□□□ -1.11
CDR2-205ENST00000567010 ARHGAP35Q9NRY4 1499 aa8.08□□□□□ -1.12
CDR2-205ENST00000567010 GABBR2O75899 941 aa8.08□□□□□ -1.12
CDR2-205ENST00000567010 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
CDR2-205ENST00000567010 FHOD3Q2V2M9 1422 aa8.08□□□□□ -1.12
CDR2-205ENST00000567010 UGGT2Q9NYU1 1516 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms