RNA–Protein interactions for RNA: ENST00000567010.1

CDR2-205, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 2

Gene CDR2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-205ENST00000567010 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
CDR2-205ENST00000567010 CHIC1Q5VXU3 224 aa14.58□□□□□ -0.08
CDR2-205ENST00000567010 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
CDR2-205ENST00000567010 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
CDR2-205ENST00000567010 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
CDR2-205ENST00000567010 FOXD1Q16676 465 aa12.19□□□□□ -0.46
CDR2-205ENST00000567010 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
CDR2-205ENST00000567010 NISCHQ9Y2I1 1504 aa11.85□□□□□ -0.51
CDR2-205ENST00000567010 MSH5O43196 834 aa11.78□□□□□ -0.52
CDR2-205ENST00000567010 PPP6R1Q9UPN7 881 aa11.21□□□□□ -0.61
CDR2-205ENST00000567010 ADRA2BP18089 450 aa11.2□□□□□ -0.62
CDR2-205ENST00000567010 PIAS4Q8N2W9 510 aaPredicted RBP11.1□□□□□ -0.63
CDR2-205ENST00000567010 CACNB1Q02641 598 aaPredicted RBP10.69□□□□□ -0.7
CDR2-205ENST00000567010 PPP4R3CPQ6ZMV5 832 aa10.5□□□□□ -0.73
CDR2-205ENST00000567010 KCNA4P22459 653 aa10.44□□□□□ -0.74
CDR2-205ENST00000567010 SCAF1Q9H7N4 1312 aaKnown RBP10.33□□□□□ -0.76
CDR2-205ENST00000567010 NCBP3Q53F19 620 aaKnown RBP10.31□□□□□ -0.76
CDR2-205ENST00000567010 CCDC180Q9P1Z9 1646 aa10.29□□□□□ -0.76
CDR2-205ENST00000567010 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
CDR2-205ENST00000567010 POTEHQ6S545 545 aa10.16□□□□□ -0.78
CDR2-205ENST00000567010 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
CDR2-205ENST00000567010 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
CDR2-205ENST00000567010 DMRT2Q9Y5R5 561 aa10.11□□□□□ -0.79
CDR2-205ENST00000567010 ABCC9O60706 1549 aa10.09□□□□□ -0.79
CDR2-205ENST00000567010 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
CDR2-205ENST00000567010 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
CDR2-205ENST00000567010 RNF39Q9H2S5 420 aa9.98□□□□□ -0.81
CDR2-205ENST00000567010 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
CDR2-205ENST00000567010 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
CDR2-205ENST00000567010 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
CDR2-205ENST00000567010 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
CDR2-205ENST00000567010 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
CDR2-205ENST00000567010 C1QBPQ07021 282 aaKnown RBP9.76□□□□□ -0.85
CDR2-205ENST00000567010 DCAF1Q9Y4B6 1507 aa9.74□□□□□ -0.85
CDR2-205ENST00000567010 NACADO15069 1562 aa9.73□□□□□ -0.85
CDR2-205ENST00000567010 CSRNP3Q8WYN3 585 aa9.72□□□□□ -0.85
CDR2-205ENST00000567010 RB1CC1Q8TDY2 1594 aa9.69□□□□□ -0.86
CDR2-205ENST00000567010 MYO15BQ96JP2 1530 aa9.69□□□□□ -0.86
CDR2-205ENST00000567010 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
CDR2-205ENST00000567010 SHROOM4Q9ULL8 1493 aa9.64□□□□□ -0.87
CDR2-205ENST00000567010 ZBTB22O15209 634 aa9.62□□□□□ -0.87
CDR2-205ENST00000567010 FOXD4L1Q9NU39 408 aa9.61□□□□□ -0.87
CDR2-205ENST00000567010 PABPN1Q86U42 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDR2-205ENST00000567010 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
CDR2-205ENST00000567010 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
CDR2-205ENST00000567010 UNC13AQ9UPW8 1703 aa9.41□□□□□ -0.9
CDR2-205ENST00000567010 BICRAQ9NZM4 1560 aa9.39□□□□□ -0.91
CDR2-205ENST00000567010 MYCNP04198 464 aaPredicted RBP9.39□□□□□ -0.91
CDR2-205ENST00000567010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.35□□□□□ -0.912e-9■■□□□ 14.4
CDR2-205ENST00000567010 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
CDR2-205ENST00000567010 CECR2Q9BXF3 1484 aa9.26□□□□□ -0.93
CDR2-205ENST00000567010 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
CDR2-205ENST00000567010 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
CDR2-205ENST00000567010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.24□□□□□ -0.93
CDR2-205ENST00000567010 HNRNPUL2Q1KMD3 747 aaKnown RBP9.24□□□□□ -0.93
CDR2-205ENST00000567010 SAMD1Q6SPF0 538 aaPredicted RBP9.21□□□□□ -0.94
CDR2-205ENST00000567010 RSF1Q96T23 1441 aaPredicted RBP9.15□□□□□ -0.94
CDR2-205ENST00000567010 MROH2BQ7Z745 1585 aa9.15□□□□□ -0.95
CDR2-205ENST00000567010 EIF4G1Q04637 1599 aaKnown RBP9.13□□□□□ -0.95
CDR2-205ENST00000567010 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
CDR2-205ENST00000567010 APLP2Q06481 763 aa9.11□□□□□ -0.95
CDR2-205ENST00000567010 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
CDR2-205ENST00000567010 ATAD2BQ9ULI0 1458 aa9.07□□□□□ -0.96
CDR2-205ENST00000567010 CC2D2AQ9P2K1 1620 aa9.06□□□□□ -0.96
CDR2-205ENST00000567010 ATF5Q9Y2D1 282 aaPredicted RBP9.06□□□□□ -0.96
CDR2-205ENST00000567010 SP7Q8TDD2 431 aaPredicted RBP9.05□□□□□ -0.96
CDR2-205ENST00000567010 WIZO95785 1651 aa9.04□□□□□ -0.96
CDR2-205ENST00000567010 NCAPD3P42695 1498 aa9.03□□□□□ -0.96
CDR2-205ENST00000567010 SMARCA2P51531 1590 aa9.01□□□□□ -0.97
CDR2-205ENST00000567010 DSG3P32926 999 aa9□□□□□ -0.97
CDR2-205ENST00000567010 BAZ1BQ9UIG0 1483 aaKnown RBP8.99□□□□□ -0.97
CDR2-205ENST00000567010 PEG3Q9GZU2 1588 aa8.96□□□□□ -0.97
CDR2-205ENST00000567010 ZNF219Q9P2Y4 722 aaPredicted RBP8.93□□□□□ -0.98
CDR2-205ENST00000567010 CCDC88BA6NC98 1476 aa8.91□□□□□ -0.98
CDR2-205ENST00000567010 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.98
CDR2-205ENST00000567010 HMGXB3Q12766 1538 aa8.9□□□□□ -0.99
CDR2-205ENST00000567010 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
CDR2-205ENST00000567010 CAPN15O75808 1086 aa8.85□□□□□ -0.99
CDR2-205ENST00000567010 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
CDR2-205ENST00000567010 CADPSQ9ULU8 1353 aa8.83□□□□□ -1
CDR2-205ENST00000567010 CHRDL2Q6WN34 429 aa8.8□□□□□ -1
CDR2-205ENST00000567010 NESP48681 1621 aa8.77□□□□□ -1.01
CDR2-205ENST00000567010 POLA2Q14181 598 aa8.76□□□□□ -1.01
CDR2-205ENST00000567010 FKBP8Q14318 412 aa8.76□□□□□ -1.01
CDR2-205ENST00000567010 CFTRP13569 1480 aa8.76□□□□□ -1.01
CDR2-205ENST00000567010 PLSCR2Q9NRY7 297 aa8.75□□□□□ -1.01
CDR2-205ENST00000567010 PDS5BQ9NTI5 1447 aa8.72□□□□□ -1.01
CDR2-205ENST00000567010 FBLN2P98095 1184 aa8.71□□□□□ -1.02
CDR2-205ENST00000567010 TRIM41Q8WV44 630 aa8.71□□□□□ -1.02
CDR2-205ENST00000567010 ZBTB12Q9Y330 459 aaPredicted RBP8.71□□□□□ -1.02
CDR2-205ENST00000567010 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
CDR2-205ENST00000567010 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
CDR2-205ENST00000567010 FANCD2Q9BXW9 1451 aa8.68□□□□□ -1.02
CDR2-205ENST00000567010 ABCB7O75027 752 aa8.67□□□□□ -1.02
CDR2-205ENST00000567010 ERCC6Q03468 1493 aa8.67□□□□□ -1.02
CDR2-205ENST00000567010 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
CDR2-205ENST00000567010 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
CDR2-205ENST00000567010 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
CDR2-205ENST00000567010 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
CDR2-205ENST00000567010 RBM42Q9BTD8 480 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms