RNA–Protein interactions for RNA: ENST00000565124.4

TCF4-227, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-227ENST00000565124 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
TCF4-227ENST00000565124 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
TCF4-227ENST00000565124 CUX2O14529 1486 aa12.58□□□□□ -0.4
TCF4-227ENST00000565124 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
TCF4-227ENST00000565124 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
TCF4-227ENST00000565124 GOLGA3Q08378 1498 aa12.52□□□□□ -0.41
TCF4-227ENST00000565124 IFT140Q96RY7 1462 aa12.52□□□□□ -0.41
TCF4-227ENST00000565124 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.41
TCF4-227ENST00000565124 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
TCF4-227ENST00000565124 CUL7Q14999 1698 aa12.51□□□□□ -0.41
TCF4-227ENST00000565124 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
TCF4-227ENST00000565124 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.41
TCF4-227ENST00000565124 EIF4G3O43432 1585 aaKnown RBP12.45□□□□□ -0.42
TCF4-227ENST00000565124 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
TCF4-227ENST00000565124 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
TCF4-227ENST00000565124 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
TCF4-227ENST00000565124 IGF1RP08069 1367 aa12.43□□□□□ -0.42
TCF4-227ENST00000565124 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
TCF4-227ENST00000565124 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
TCF4-227ENST00000565124 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
TCF4-227ENST00000565124 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
TCF4-227ENST00000565124 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
TCF4-227ENST00000565124 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
TCF4-227ENST00000565124 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
TCF4-227ENST00000565124 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
TCF4-227ENST00000565124 AQRO60306 1485 aaKnown RBP eCLIP12.37□□□□□ -0.43
TCF4-227ENST00000565124 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
TCF4-227ENST00000565124 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
TCF4-227ENST00000565124 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
TCF4-227ENST00000565124 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
TCF4-227ENST00000565124 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
TCF4-227ENST00000565124 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
TCF4-227ENST00000565124 APLP2Q06481 763 aa12.32□□□□□ -0.44
TCF4-227ENST00000565124 SNAPC4Q5SXM2 1469 aa12.32□□□□□ -0.44
TCF4-227ENST00000565124 CLIP1P30622 1438 aa12.27□□□□□ -0.45
TCF4-227ENST00000565124 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
TCF4-227ENST00000565124 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
TCF4-227ENST00000565124 CHD1O14646 1710 aa12.23□□□□□ -0.45
TCF4-227ENST00000565124 EFCAB5A4FU69 1503 aa12.23□□□□□ -0.45
TCF4-227ENST00000565124 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
TCF4-227ENST00000565124 IQGAP2Q13576 1575 aa12.22□□□□□ -0.45
TCF4-227ENST00000565124 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
TCF4-227ENST00000565124 SAMD9Q5K651 1589 aa12.19□□□□□ -0.46
TCF4-227ENST00000565124 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
TCF4-227ENST00000565124 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
TCF4-227ENST00000565124 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
TCF4-227ENST00000565124 NUP160Q12769 1436 aa12.16□□□□□ -0.46
TCF4-227ENST00000565124 VPS8Q8N3P4 1428 aa12.16□□□□□ -0.46
TCF4-227ENST00000565124 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
TCF4-227ENST00000565124 CAPN15O75808 1086 aa12.14□□□□□ -0.47
TCF4-227ENST00000565124 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
TCF4-227ENST00000565124 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
TCF4-227ENST00000565124 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
TCF4-227ENST00000565124 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
TCF4-227ENST00000565124 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
TCF4-227ENST00000565124 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
TCF4-227ENST00000565124 KIAA0556O60303 1618 aa12.1□□□□□ -0.47
TCF4-227ENST00000565124 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
TCF4-227ENST00000565124 POLA2Q14181 598 aa12.08□□□□□ -0.48
TCF4-227ENST00000565124 FHOD3Q2V2M9 1422 aa12.08□□□□□ -0.48
TCF4-227ENST00000565124 FBLN2P98095 1184 aa12.07□□□□□ -0.48
TCF4-227ENST00000565124 SHROOM2Q13796 1616 aa12.07□□□□□ -0.48
TCF4-227ENST00000565124 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
TCF4-227ENST00000565124 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
TCF4-227ENST00000565124 FMN1Q68DA7 1419 aa12.05□□□□□ -0.48
TCF4-227ENST00000565124 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
TCF4-227ENST00000565124 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
TCF4-227ENST00000565124 DISP1Q96F81 1524 aa12.05□□□□□ -0.48
TCF4-227ENST00000565124 HECW1Q76N89 1606 aa12.01□□□□□ -0.49
TCF4-227ENST00000565124 CASKIN1Q8WXD9 1431 aa12.01□□□□□ -0.49
TCF4-227ENST00000565124 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
TCF4-227ENST00000565124 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
TCF4-227ENST00000565124 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
TCF4-227ENST00000565124 ABCB7O75027 752 aa12□□□□□ -0.49
TCF4-227ENST00000565124 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
TCF4-227ENST00000565124 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
TCF4-227ENST00000565124 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
TCF4-227ENST00000565124 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
TCF4-227ENST00000565124 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
TCF4-227ENST00000565124 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
TCF4-227ENST00000565124 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
TCF4-227ENST00000565124 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
TCF4-227ENST00000565124 PRG4Q92954 1404 aaPredicted RBP11.94□□□□□ -0.5
TCF4-227ENST00000565124 ABCA8O94911 1581 aa11.92□□□□□ -0.5
TCF4-227ENST00000565124 ERCC6L2Q5T890 1561 aa11.91□□□□□ -0.5
TCF4-227ENST00000565124 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
TCF4-227ENST00000565124 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
TCF4-227ENST00000565124 EPRSP07814 1512 aaKnown RBP11.89□□□□□ -0.51
TCF4-227ENST00000565124 NUP153P49790 1475 aaKnown RBP11.88□□□□□ -0.51
TCF4-227ENST00000565124 SUPT6HQ7KZ85 1726 aaKnown RBP11.87□□□□□ -0.51
TCF4-227ENST00000565124 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
TCF4-227ENST00000565124 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
TCF4-227ENST00000565124 CDK13Q14004 1512 aaKnown RBP11.86□□□□□ -0.51
TCF4-227ENST00000565124 PROM2Q8N271 834 aa11.86□□□□□ -0.51
TCF4-227ENST00000565124 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
TCF4-227ENST00000565124 PTPRGP23470 1445 aa11.85□□□□□ -0.51
TCF4-227ENST00000565124 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
TCF4-227ENST00000565124 ATP1B4Q9UN42 357 aaPredicted RBP11.84□□□□□ -0.51
TCF4-227ENST00000565124 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
TCF4-227ENST00000565124 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms