RNA–Protein interactions for RNA: ENST00000565124.4

TCF4-227, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-227ENST00000565124 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
TCF4-227ENST00000565124 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
TCF4-227ENST00000565124 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
TCF4-227ENST00000565124 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
TCF4-227ENST00000565124 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
TCF4-227ENST00000565124 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
TCF4-227ENST00000565124 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
TCF4-227ENST00000565124 FOXD1Q16676 465 aa15.54■□□□□ 0.08
TCF4-227ENST00000565124 ADRA2BP18089 450 aa15.44■□□□□ 0.06
TCF4-227ENST00000565124 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
TCF4-227ENST00000565124 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
TCF4-227ENST00000565124 KCNA4P22459 653 aa14.83□□□□□ -0.04
TCF4-227ENST00000565124 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
TCF4-227ENST00000565124 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
TCF4-227ENST00000565124 ABCC9O60706 1549 aa14.72□□□□□ -0.05
TCF4-227ENST00000565124 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
TCF4-227ENST00000565124 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
TCF4-227ENST00000565124 NACADO15069 1562 aa14.54□□□□□ -0.08
TCF4-227ENST00000565124 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
TCF4-227ENST00000565124 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
TCF4-227ENST00000565124 RB1CC1Q8TDY2 1594 aa14.44□□□□□ -0.1
TCF4-227ENST00000565124 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
TCF4-227ENST00000565124 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
TCF4-227ENST00000565124 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
TCF4-227ENST00000565124 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
TCF4-227ENST00000565124 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
TCF4-227ENST00000565124 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
TCF4-227ENST00000565124 MSH5O43196 834 aa14.06□□□□□ -0.16
TCF4-227ENST00000565124 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
TCF4-227ENST00000565124 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
TCF4-227ENST00000565124 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
TCF4-227ENST00000565124 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
TCF4-227ENST00000565124 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
TCF4-227ENST00000565124 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
TCF4-227ENST00000565124 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
TCF4-227ENST00000565124 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
TCF4-227ENST00000565124 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
TCF4-227ENST00000565124 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
TCF4-227ENST00000565124 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
TCF4-227ENST00000565124 ZBTB22O15209 634 aa13.66□□□□□ -0.22
TCF4-227ENST00000565124 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
TCF4-227ENST00000565124 WIZO95785 1651 aa13.59□□□□□ -0.23
TCF4-227ENST00000565124 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
TCF4-227ENST00000565124 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
TCF4-227ENST00000565124 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
TCF4-227ENST00000565124 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
TCF4-227ENST00000565124 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
TCF4-227ENST00000565124 ATAD2BQ9ULI0 1458 aa13.45□□□□□ -0.26
TCF4-227ENST00000565124 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
TCF4-227ENST00000565124 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
TCF4-227ENST00000565124 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
TCF4-227ENST00000565124 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
TCF4-227ENST00000565124 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
TCF4-227ENST00000565124 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
TCF4-227ENST00000565124 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
TCF4-227ENST00000565124 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
TCF4-227ENST00000565124 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
TCF4-227ENST00000565124 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
TCF4-227ENST00000565124 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
TCF4-227ENST00000565124 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
TCF4-227ENST00000565124 CFTRP13569 1480 aa13.03□□□□□ -0.32
TCF4-227ENST00000565124 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
TCF4-227ENST00000565124 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
TCF4-227ENST00000565124 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
TCF4-227ENST00000565124 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
TCF4-227ENST00000565124 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
TCF4-227ENST00000565124 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
TCF4-227ENST00000565124 NESP48681 1621 aa12.89□□□□□ -0.35
TCF4-227ENST00000565124 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
TCF4-227ENST00000565124 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
TCF4-227ENST00000565124 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
TCF4-227ENST00000565124 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
TCF4-227ENST00000565124 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
TCF4-227ENST00000565124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
TCF4-227ENST00000565124 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
TCF4-227ENST00000565124 PDS5BQ9NTI5 1447 aa12.82□□□□□ -0.36
TCF4-227ENST00000565124 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
TCF4-227ENST00000565124 CUX1P39880 1505 aa12.82□□□□□ -0.36
TCF4-227ENST00000565124 DNMBPQ6XZF7 1577 aa12.79□□□□□ -0.36
TCF4-227ENST00000565124 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
TCF4-227ENST00000565124 URB2Q14146 1524 aaKnown RBP12.71□□□□□ -0.38
TCF4-227ENST00000565124 EEA1Q15075 1411 aa12.71□□□□□ -0.38
TCF4-227ENST00000565124 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
TCF4-227ENST00000565124 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
TCF4-227ENST00000565124 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
TCF4-227ENST00000565124 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
TCF4-227ENST00000565124 FKBP8Q14318 412 aa12.67□□□□□ -0.38
TCF4-227ENST00000565124 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
TCF4-227ENST00000565124 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
TCF4-227ENST00000565124 WDR62O43379 1518 aa12.66□□□□□ -0.38
TCF4-227ENST00000565124 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
TCF4-227ENST00000565124 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
TCF4-227ENST00000565124 SOGA1O94964 1423 aa12.64□□□□□ -0.39
TCF4-227ENST00000565124 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
TCF4-227ENST00000565124 ABCA10Q8WWZ4 1543 aa12.6□□□□□ -0.39
TCF4-227ENST00000565124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
TCF4-227ENST00000565124 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
TCF4-227ENST00000565124 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
TCF4-227ENST00000565124 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
TCF4-227ENST00000565124 KIF21BO75037 1637 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms