RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 CFAP43Q8NDM7 1665 aa31.52■■■□□ 2.64
LINC00565-201ENST00000562710 SETD5Q9C0A6 1442 aa31.52■■■□□ 2.64
LINC00565-201ENST00000562710 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
LINC00565-201ENST00000562710 PCF11O94913 1555 aaKnown RBP31.47■■■□□ 2.63
LINC00565-201ENST00000562710 CC2D2AQ9P2K1 1620 aa31.45■■■□□ 2.63
LINC00565-201ENST00000562710 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
LINC00565-201ENST00000562710 P3H3Q8IVL6 736 aa31.39■■■□□ 2.62
LINC00565-201ENST00000562710 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
LINC00565-201ENST00000562710 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
LINC00565-201ENST00000562710 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
LINC00565-201ENST00000562710 EFCAB5A4FU69 1503 aa31.35■■■□□ 2.61
LINC00565-201ENST00000562710 FHOD3Q2V2M9 1422 aa31.34■■■□□ 2.61
LINC00565-201ENST00000562710 FYCO1Q9BQS8 1478 aa31.34■■■□□ 2.61
LINC00565-201ENST00000562710 POLA1P09884 1462 aaPredicted RBP31.32■■■□□ 2.6
LINC00565-201ENST00000562710 TOPBP1Q92547 1522 aa31.32■■■□□ 2.6
LINC00565-201ENST00000562710 ATP1B4Q9UN42 357 aaPredicted RBP31.3■■■□□ 2.6
LINC00565-201ENST00000562710 CUL7Q14999 1698 aa31.29■■■□□ 2.6
LINC00565-201ENST00000562710 CASKIN1Q8WXD9 1431 aa31.29■■■□□ 2.6
LINC00565-201ENST00000562710 AQRO60306 1485 aaKnown RBP eCLIP31.29■■■□□ 2.6
LINC00565-201ENST00000562710 CTTNBP2Q8WZ74 1663 aa31.27■■■□□ 2.6
LINC00565-201ENST00000562710 WDR97A6NE52 1622 aa31.26■■■□□ 2.59
LINC00565-201ENST00000562710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.24■■■□□ 2.59
LINC00565-201ENST00000562710 SIN3AQ96ST3 1273 aa31.24■■■□□ 2.59
LINC00565-201ENST00000562710 SUPT16HQ9Y5B9 1047 aaKnown RBP31.21■■■□□ 2.59
LINC00565-201ENST00000562710 TIMELESSQ9UNS1 1208 aa31.2■■■□□ 2.59
LINC00565-201ENST00000562710 NESP48681 1621 aa31.17■■■□□ 2.58
LINC00565-201ENST00000562710 FMN1Q68DA7 1419 aa31.15■■■□□ 2.58
LINC00565-201ENST00000562710 MYT1Q01538 1121 aa31.13■■■□□ 2.57
LINC00565-201ENST00000562710 KCNH8Q96L42 1107 aa31.11■■■□□ 2.57
LINC00565-201ENST00000562710 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
LINC00565-201ENST00000562710 FGD6Q6ZV73 1430 aa31.09■■■□□ 2.57
LINC00565-201ENST00000562710 DDX10Q13206 875 aaKnown RBP31.06■■■□□ 2.56
LINC00565-201ENST00000562710 PPP1R15AO75807 674 aaPredicted RBP31.04■■■□□ 2.56
LINC00565-201ENST00000562710 URB2Q14146 1524 aaKnown RBP31.02■■■□□ 2.56
LINC00565-201ENST00000562710 SAMD9Q5K651 1589 aa31.01■■■□□ 2.56
LINC00565-201ENST00000562710 MTUS2Q5JR59 1369 aa31■■■□□ 2.55
LINC00565-201ENST00000562710 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
LINC00565-201ENST00000562710 ABCA5Q8WWZ7 1642 aa30.99■■■□□ 2.55
LINC00565-201ENST00000562710 LRRIQ1Q96JM4 1722 aa30.97■■■□□ 2.55
LINC00565-201ENST00000562710 CCDC18Q5T9S5 1454 aa30.97■■■□□ 2.55
LINC00565-201ENST00000562710 HFM1A2PYH4 1435 aa30.95■■■□□ 2.55
LINC00565-201ENST00000562710 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
LINC00565-201ENST00000562710 PTPRKQ15262 1439 aa30.93■■■□□ 2.54
LINC00565-201ENST00000562710 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
LINC00565-201ENST00000562710 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
LINC00565-201ENST00000562710 PTPN23Q9H3S7 1636 aa30.91■■■□□ 2.54
LINC00565-201ENST00000562710 UACAQ9BZF9 1416 aa30.91■■■□□ 2.54
LINC00565-201ENST00000562710 THOC2Q8NI27 1593 aaKnown RBP30.89■■■□□ 2.54
LINC00565-201ENST00000562710 NCOA2Q15596 1464 aa30.89■■■□□ 2.54
LINC00565-201ENST00000562710 TONSLQ96HA7 1378 aa30.88■■■□□ 2.53
LINC00565-201ENST00000562710 MYOM3Q5VTT5 1437 aa30.88■■■□□ 2.53
LINC00565-201ENST00000562710 HIRIP3Q9BW71 556 aaPredicted RBP30.87■■■□□ 2.53
LINC00565-201ENST00000562710 SUPT6HQ7KZ85 1726 aaKnown RBP30.86■■■□□ 2.53
LINC00565-201ENST00000562710 NAIPQ13075 1403 aa30.83■■■□□ 2.53
LINC00565-201ENST00000562710 EHBP1L1Q8N3D4 1523 aa30.82■■■□□ 2.52
LINC00565-201ENST00000562710 CCER2I3L3R5 266 aa30.81■■■□□ 2.52
LINC00565-201ENST00000562710 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
LINC00565-201ENST00000562710 ANP32CO43423 234 aa30.78■■■□□ 2.52
LINC00565-201ENST00000562710 PDS5BQ9NTI5 1447 aa30.77■■■□□ 2.52
LINC00565-201ENST00000562710 UGGT2Q9NYU1 1516 aa30.75■■■□□ 2.51
LINC00565-201ENST00000562710 ARHGEF11O15085 1522 aa30.74■■■□□ 2.51
LINC00565-201ENST00000562710 TSHZ2Q9NRE2 1034 aa30.72■■■□□ 2.51
LINC00565-201ENST00000562710 MAGI3Q5TCQ9 1506 aa30.7■■■□□ 2.51
LINC00565-201ENST00000562710 TARBP1Q13395 1621 aaKnown RBP30.68■■■□□ 2.5
LINC00565-201ENST00000562710 KDM5BQ9UGL1 1544 aa30.66■■■□□ 2.5
LINC00565-201ENST00000562710 TCOF1Q13428 1488 aaKnown RBP30.64■■■□□ 2.5
LINC00565-201ENST00000562710 FKBP8Q14318 412 aa30.64■■■□□ 2.5
LINC00565-201ENST00000562710 HECW1Q76N89 1606 aa30.62■■■□□ 2.49
LINC00565-201ENST00000562710 GCC2Q8IWJ2 1684 aa30.61■■■□□ 2.49
LINC00565-201ENST00000562710 TRIM52Q96A61 297 aa30.59■■■□□ 2.49
LINC00565-201ENST00000562710 BCANQ96GW7 911 aa30.58■■■□□ 2.49
LINC00565-201ENST00000562710 RRP7BPQ9NSQ0 103 aa30.57■■■□□ 2.48
LINC00565-201ENST00000562710 PBRM1Q86U86 1689 aa30.57■■■□□ 2.48
LINC00565-201ENST00000562710 AKNAQ7Z591 1439 aa30.55■■■□□ 2.48
LINC00565-201ENST00000562710 IQGAP2Q13576 1575 aa30.55■■■□□ 2.48
LINC00565-201ENST00000562710 EPRSP07814 1512 aaKnown RBP30.54■■■□□ 2.48
LINC00565-201ENST00000562710 CHIC2Q9UKJ5 165 aa30.53■■■□□ 2.48
LINC00565-201ENST00000562710 DENND4BO75064 1496 aaPredicted RBP30.52■■■□□ 2.48
LINC00565-201ENST00000562710 NEFLP07196 543 aa30.51■■■□□ 2.48
LINC00565-201ENST00000562710 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.48
LINC00565-201ENST00000562710 MIA2Q96PC5 1412 aa30.49■■■□□ 2.47
LINC00565-201ENST00000562710 KDM6BO15054 1643 aa30.47■■■□□ 2.47
LINC00565-201ENST00000562710 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
LINC00565-201ENST00000562710 CDK13Q14004 1512 aaKnown RBP30.46■■■□□ 2.47
LINC00565-201ENST00000562710 WDR62O43379 1518 aa30.44■■■□□ 2.46
LINC00565-201ENST00000562710 HSPA5P11021 654 aaKnown RBP30.41■■■□□ 2.46
LINC00565-201ENST00000562710 MPHOSPH9Q99550 1183 aa30.39■■■□□ 2.46
LINC00565-201ENST00000562710 WASHC2AQ641Q2 1341 aa30.39■■■□□ 2.46
LINC00565-201ENST00000562710 EIF4G2P78344 907 aaKnown RBP eCLIP30.34■■■□□ 2.45
LINC00565-201ENST00000562710 ARID3CA6NKF2 412 aa30.3■■■□□ 2.44
LINC00565-201ENST00000562710 L3MBTL2Q969R5 705 aa30.29■■■□□ 2.44
LINC00565-201ENST00000562710 MRC2Q9UBG0 1479 aa30.28■■■□□ 2.44
LINC00565-201ENST00000562710 ROCK1Q13464 1354 aa30.28■■■□□ 2.44
LINC00565-201ENST00000562710 HNRNPUQ00839 825 aaKnown RBP eCLIP30.27■■■□□ 2.44
LINC00565-201ENST00000562710 DAPK1P53355 1430 aa30.27■■■□□ 2.44
LINC00565-201ENST00000562710 FOXD1Q16676 465 aa30.25■■■□□ 2.43
LINC00565-201ENST00000562710 DNMT1P26358 1616 aaKnown RBP30.24■■■□□ 2.43
LINC00565-201ENST00000562710 CNTLNQ9NXG0 1405 aa30.24■■■□□ 2.43
LINC00565-201ENST00000562710 ANKRD30BQ9BXX2 1392 aa30.22■■■□□ 2.43
LINC00565-201ENST00000562710 KIAA0556O60303 1618 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms