RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
VAC14-203ENST00000561879 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
VAC14-203ENST00000561879 GAPVD1Q14C86 1478 aa17.01■□□□□ 0.31
VAC14-203ENST00000561879 KIF21BO75037 1637 aa16.99■□□□□ 0.31
VAC14-203ENST00000561879 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
VAC14-203ENST00000561879 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
VAC14-203ENST00000561879 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
VAC14-203ENST00000561879 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
VAC14-203ENST00000561879 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
VAC14-203ENST00000561879 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.3
VAC14-203ENST00000561879 TNIKQ9UKE5 1360 aa16.94■□□□□ 0.3
VAC14-203ENST00000561879 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
VAC14-203ENST00000561879 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
VAC14-203ENST00000561879 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
VAC14-203ENST00000561879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
VAC14-203ENST00000561879 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
VAC14-203ENST00000561879 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
VAC14-203ENST00000561879 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
VAC14-203ENST00000561879 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
VAC14-203ENST00000561879 CUL7Q14999 1698 aa16.89■□□□□ 0.29
VAC14-203ENST00000561879 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
VAC14-203ENST00000561879 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
VAC14-203ENST00000561879 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
VAC14-203ENST00000561879 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
VAC14-203ENST00000561879 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
VAC14-203ENST00000561879 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
VAC14-203ENST00000561879 FKBP8Q14318 412 aa16.77■□□□□ 0.28
VAC14-203ENST00000561879 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
VAC14-203ENST00000561879 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
VAC14-203ENST00000561879 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
VAC14-203ENST00000561879 CLIP1P30622 1438 aa16.7■□□□□ 0.26
VAC14-203ENST00000561879 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
VAC14-203ENST00000561879 FBLN2P98095 1184 aa16.63■□□□□ 0.25
VAC14-203ENST00000561879 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
VAC14-203ENST00000561879 NUP160Q12769 1436 aa16.62■□□□□ 0.25
VAC14-203ENST00000561879 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
VAC14-203ENST00000561879 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
VAC14-203ENST00000561879 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
VAC14-203ENST00000561879 APLP2Q06481 763 aa16.57■□□□□ 0.24
VAC14-203ENST00000561879 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
VAC14-203ENST00000561879 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
VAC14-203ENST00000561879 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
VAC14-203ENST00000561879 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
VAC14-203ENST00000561879 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
VAC14-203ENST00000561879 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
VAC14-203ENST00000561879 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
VAC14-203ENST00000561879 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
VAC14-203ENST00000561879 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
VAC14-203ENST00000561879 CHD1O14646 1710 aa16.48■□□□□ 0.23
VAC14-203ENST00000561879 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
VAC14-203ENST00000561879 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
VAC14-203ENST00000561879 CARMIL2Q6F5E8 1435 aa16.44■□□□□ 0.22
VAC14-203ENST00000561879 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
VAC14-203ENST00000561879 DISP1Q96F81 1524 aa16.43■□□□□ 0.22
VAC14-203ENST00000561879 FHOD3Q2V2M9 1422 aa16.43■□□□□ 0.22
VAC14-203ENST00000561879 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
VAC14-203ENST00000561879 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
VAC14-203ENST00000561879 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
VAC14-203ENST00000561879 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
VAC14-203ENST00000561879 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
VAC14-203ENST00000561879 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
VAC14-203ENST00000561879 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
VAC14-203ENST00000561879 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
VAC14-203ENST00000561879 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
VAC14-203ENST00000561879 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
VAC14-203ENST00000561879 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
VAC14-203ENST00000561879 PTPRGP23470 1445 aa16.28■□□□□ 0.2
VAC14-203ENST00000561879 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
VAC14-203ENST00000561879 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
VAC14-203ENST00000561879 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
VAC14-203ENST00000561879 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
VAC14-203ENST00000561879 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
VAC14-203ENST00000561879 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
VAC14-203ENST00000561879 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
VAC14-203ENST00000561879 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
VAC14-203ENST00000561879 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
VAC14-203ENST00000561879 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
VAC14-203ENST00000561879 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
VAC14-203ENST00000561879 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
VAC14-203ENST00000561879 ABCA8O94911 1581 aa16.19■□□□□ 0.18
VAC14-203ENST00000561879 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
VAC14-203ENST00000561879 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
VAC14-203ENST00000561879 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
VAC14-203ENST00000561879 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
VAC14-203ENST00000561879 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
VAC14-203ENST00000561879 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
VAC14-203ENST00000561879 NUP153P49790 1475 aaKnown RBP16.18■□□□□ 0.18
VAC14-203ENST00000561879 CAPN15O75808 1086 aa16.18■□□□□ 0.18
VAC14-203ENST00000561879 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
VAC14-203ENST00000561879 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
VAC14-203ENST00000561879 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
VAC14-203ENST00000561879 POLA2Q14181 598 aa16.15■□□□□ 0.18
VAC14-203ENST00000561879 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
VAC14-203ENST00000561879 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
VAC14-203ENST00000561879 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
VAC14-203ENST00000561879 ATP10BO94823 1461 aa16.11■□□□□ 0.17
VAC14-203ENST00000561879 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
VAC14-203ENST00000561879 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
VAC14-203ENST00000561879 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
VAC14-203ENST00000561879 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms