RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
PCAT29-204ENST00000560655 HRCP23327 699 aa9.62□□□□□ -0.87
PCAT29-204ENST00000560655 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
PCAT29-204ENST00000560655 POTEIP0CG38 1075 aa9.59□□□□□ -0.87
PCAT29-204ENST00000560655 CFTRP13569 1480 aa9.59□□□□□ -0.87
PCAT29-204ENST00000560655 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
PCAT29-204ENST00000560655 ATF5Q9Y2D1 282 aaPredicted RBP9.55□□□□□ -0.88
PCAT29-204ENST00000560655 TOP2BQ02880 1626 aa9.55□□□□□ -0.88
PCAT29-204ENST00000560655 POTEMA6NI47 508 aa9.54□□□□□ -0.88
PCAT29-204ENST00000560655 KCNA4P22459 653 aa9.54□□□□□ -0.88
PCAT29-204ENST00000560655 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
PCAT29-204ENST00000560655 BIVM-ERCC5R4GMW8 1640 aa9.53□□□□□ -0.88
PCAT29-204ENST00000560655 GOLGA3Q08378 1498 aa9.52□□□□□ -0.89
PCAT29-204ENST00000560655 CADPSQ9ULU8 1353 aa9.51□□□□□ -0.89
PCAT29-204ENST00000560655 CEP162Q5TB80 1403 aa9.51□□□□□ -0.89
PCAT29-204ENST00000560655 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
PCAT29-204ENST00000560655 CUX1P39880 1505 aa9.51□□□□□ -0.89
PCAT29-204ENST00000560655 KIF21BO75037 1637 aa9.49□□□□□ -0.89
PCAT29-204ENST00000560655 CEP164Q9UPV0 1460 aa9.49□□□□□ -0.89
PCAT29-204ENST00000560655 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
PCAT29-204ENST00000560655 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
PCAT29-204ENST00000560655 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
PCAT29-204ENST00000560655 DCBLD2Q96PD2 775 aa9.46□□□□□ -0.9
PCAT29-204ENST00000560655 PPARGC1BQ86YN6 1023 aaKnown RBP9.45□□□□□ -0.9
PCAT29-204ENST00000560655 RAPGEF2Q9Y4G8 1499 aa9.45□□□□□ -0.9
PCAT29-204ENST00000560655 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
PCAT29-204ENST00000560655 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
PCAT29-204ENST00000560655 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
PCAT29-204ENST00000560655 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
PCAT29-204ENST00000560655 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
PCAT29-204ENST00000560655 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
PCAT29-204ENST00000560655 PCDH10Q9P2E7 1040 aa9.41□□□□□ -0.9
PCAT29-204ENST00000560655 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
PCAT29-204ENST00000560655 CLIP1P30622 1438 aa9.39□□□□□ -0.91
PCAT29-204ENST00000560655 ERICH3Q5RHP9 1530 aa9.39□□□□□ -0.91
PCAT29-204ENST00000560655 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
PCAT29-204ENST00000560655 FANCD2Q9BXW9 1451 aa9.38□□□□□ -0.91
PCAT29-204ENST00000560655 IGF1RP08069 1367 aa9.37□□□□□ -0.91
PCAT29-204ENST00000560655 CLCN6P51797 869 aa9.37□□□□□ -0.91
PCAT29-204ENST00000560655 NESP48681 1621 aa9.36□□□□□ -0.91
PCAT29-204ENST00000560655 FGD5Q6ZNL6 1462 aa9.35□□□□□ -0.91
PCAT29-204ENST00000560655 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.91
PCAT29-204ENST00000560655 ZEB1P37275 1124 aaPredicted RBP9.34□□□□□ -0.91
PCAT29-204ENST00000560655 CUX2O14529 1486 aa9.34□□□□□ -0.91
PCAT29-204ENST00000560655 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
PCAT29-204ENST00000560655 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
PCAT29-204ENST00000560655 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
PCAT29-204ENST00000560655 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
PCAT29-204ENST00000560655 ARAP1Q96P48 1450 aa9.29□□□□□ -0.92
PCAT29-204ENST00000560655 CARMIL1Q5VZK9 1371 aa9.29□□□□□ -0.92
PCAT29-204ENST00000560655 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
PCAT29-204ENST00000560655 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
PCAT29-204ENST00000560655 ABCA10Q8WWZ4 1543 aa9.28□□□□□ -0.92
PCAT29-204ENST00000560655 FBLN2P98095 1184 aa9.28□□□□□ -0.92
PCAT29-204ENST00000560655 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
PCAT29-204ENST00000560655 URB2Q14146 1524 aaKnown RBP9.27□□□□□ -0.93
PCAT29-204ENST00000560655 POTEB2H3BUK9 544 aa9.27□□□□□ -0.93
PCAT29-204ENST00000560655 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.93
PCAT29-204ENST00000560655 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
PCAT29-204ENST00000560655 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
PCAT29-204ENST00000560655 ARHGAP35Q9NRY4 1499 aa9.25□□□□□ -0.93
PCAT29-204ENST00000560655 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
PCAT29-204ENST00000560655 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
PCAT29-204ENST00000560655 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
PCAT29-204ENST00000560655 TDRD9Q8NDG6 1382 aaKnown RBP9.18□□□□□ -0.94
PCAT29-204ENST00000560655 CCER1Q8TC90 406 aaPredicted RBP9.18□□□□□ -0.94
PCAT29-204ENST00000560655 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
PCAT29-204ENST00000560655 KIF21AQ7Z4S6 1674 aa9.17□□□□□ -0.94
PCAT29-204ENST00000560655 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
PCAT29-204ENST00000560655 ABCA5Q8WWZ7 1642 aa9.16□□□□□ -0.94
PCAT29-204ENST00000560655 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.94
PCAT29-204ENST00000560655 ZRANB1Q9UGI0 708 aa9.15□□□□□ -0.94
PCAT29-204ENST00000560655 CUL7Q14999 1698 aa9.15□□□□□ -0.94
PCAT29-204ENST00000560655 MAP3K1Q13233 1512 aa9.15□□□□□ -0.95
PCAT29-204ENST00000560655 TARBP1Q13395 1621 aaKnown RBP9.14□□□□□ -0.95
PCAT29-204ENST00000560655 FOXD4L1Q9NU39 408 aa9.14□□□□□ -0.95
PCAT29-204ENST00000560655 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
PCAT29-204ENST00000560655 MRC2Q9UBG0 1479 aa9.13□□□□□ -0.95
PCAT29-204ENST00000560655 RRBP1Q9P2E9 1410 aaKnown RBP9.13□□□□□ -0.95
PCAT29-204ENST00000560655 GALR2O43603 387 aaPredicted RBP9.12□□□□□ -0.95
PCAT29-204ENST00000560655 P3H3Q8IVL6 736 aa9.1□□□□□ -0.95
PCAT29-204ENST00000560655 FHAD1B1AJZ9 1412 aa9.1□□□□□ -0.95
PCAT29-204ENST00000560655 EFCAB5A4FU69 1503 aa9.09□□□□□ -0.95
PCAT29-204ENST00000560655 TIAM1Q13009 1591 aa9.08□□□□□ -0.96
PCAT29-204ENST00000560655 FHOD3Q2V2M9 1422 aa9.08□□□□□ -0.96
PCAT29-204ENST00000560655 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
PCAT29-204ENST00000560655 CASKIN1Q8WXD9 1431 aa9.07□□□□□ -0.96
PCAT29-204ENST00000560655 LRRC9Q6ZRR7 1453 aa9.07□□□□□ -0.96
PCAT29-204ENST00000560655 WDR62O43379 1518 aa9.06□□□□□ -0.96
PCAT29-204ENST00000560655 CCNB3Q8WWL7 1395 aa9.06□□□□□ -0.96
PCAT29-204ENST00000560655 CTTNBP2Q8WZ74 1663 aa9.06□□□□□ -0.96
PCAT29-204ENST00000560655 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
PCAT29-204ENST00000560655 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
PCAT29-204ENST00000560655 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
PCAT29-204ENST00000560655 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
PCAT29-204ENST00000560655 GRIN2BQ13224 1484 aa9.04□□□□□ -0.96
PCAT29-204ENST00000560655 MKRN4PQ13434 485 aaPredicted RBP9.04□□□□□ -0.96
PCAT29-204ENST00000560655 FYCO1Q9BQS8 1478 aa9.03□□□□□ -0.96
PCAT29-204ENST00000560655 PHLDB1Q86UU1 1377 aa9.03□□□□□ -0.96
PCAT29-204ENST00000560655 MAMSTRQ6ZN01 415 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms