RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
PCAT29-204ENST00000560655 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
PCAT29-204ENST00000560655 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
PCAT29-204ENST00000560655 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
PCAT29-204ENST00000560655 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
PCAT29-204ENST00000560655 FOXD1Q16676 465 aa14.91□□□□□ -0.02
PCAT29-204ENST00000560655 MSH5O43196 834 aa14.27□□□□□ -0.13
PCAT29-204ENST00000560655 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
PCAT29-204ENST00000560655 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
PCAT29-204ENST00000560655 ADRA2BP18089 450 aa13.26□□□□□ -0.29
PCAT29-204ENST00000560655 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
PCAT29-204ENST00000560655 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
PCAT29-204ENST00000560655 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
PCAT29-204ENST00000560655 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
PCAT29-204ENST00000560655 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-204ENST00000560655 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
PCAT29-204ENST00000560655 DCAF8L1A6NGE4 600 aa12.13□□□□□ -0.47
PCAT29-204ENST00000560655 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
PCAT29-204ENST00000560655 C1QBPQ07021 282 aaKnown RBP11.88□□□□□ -0.51
PCAT29-204ENST00000560655 POTEHQ6S545 545 aa11.86□□□□□ -0.51
PCAT29-204ENST00000560655 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
PCAT29-204ENST00000560655 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
PCAT29-204ENST00000560655 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
PCAT29-204ENST00000560655 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
PCAT29-204ENST00000560655 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
PCAT29-204ENST00000560655 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
PCAT29-204ENST00000560655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCAT29-204ENST00000560655 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
PCAT29-204ENST00000560655 DSG3P32926 999 aa11.05□□□□□ -0.64
PCAT29-204ENST00000560655 CAPN15O75808 1086 aa11□□□□□ -0.65
PCAT29-204ENST00000560655 SPINK5Q9NQ38 1064 aaPredicted RBP10.93□□□□□ -0.66
PCAT29-204ENST00000560655 SHROOM4Q9ULL8 1493 aa10.92□□□□□ -0.66
PCAT29-204ENST00000560655 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
PCAT29-204ENST00000560655 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
PCAT29-204ENST00000560655 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
PCAT29-204ENST00000560655 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
PCAT29-204ENST00000560655 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
PCAT29-204ENST00000560655 ABCB7O75027 752 aa10.66□□□□□ -0.7
PCAT29-204ENST00000560655 NCBP3Q53F19 620 aaKnown RBP10.66□□□□□ -0.7
PCAT29-204ENST00000560655 MYO15BQ96JP2 1530 aa10.66□□□□□ -0.7
PCAT29-204ENST00000560655 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
PCAT29-204ENST00000560655 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
PCAT29-204ENST00000560655 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
PCAT29-204ENST00000560655 ABCC9O60706 1549 aa10.55□□□□□ -0.72
PCAT29-204ENST00000560655 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
PCAT29-204ENST00000560655 NACADO15069 1562 aa10.51□□□□□ -0.73
PCAT29-204ENST00000560655 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
PCAT29-204ENST00000560655 APLP2Q06481 763 aa10.46□□□□□ -0.73
PCAT29-204ENST00000560655 SCRIBQ14160 1630 aa10.44□□□□□ -0.74
PCAT29-204ENST00000560655 HAX1O00165 279 aa10.37□□□□□ -0.75
PCAT29-204ENST00000560655 RSF1Q96T23 1441 aaPredicted RBP10.34□□□□□ -0.75
PCAT29-204ENST00000560655 RB1CC1Q8TDY2 1594 aa10.34□□□□□ -0.75
PCAT29-204ENST00000560655 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
PCAT29-204ENST00000560655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
PCAT29-204ENST00000560655 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
PCAT29-204ENST00000560655 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
PCAT29-204ENST00000560655 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
PCAT29-204ENST00000560655 MROH2BQ7Z745 1585 aa10.2□□□□□ -0.78
PCAT29-204ENST00000560655 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
PCAT29-204ENST00000560655 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
PCAT29-204ENST00000560655 POLA2Q14181 598 aa10.15□□□□□ -0.78
PCAT29-204ENST00000560655 SAMD1Q6SPF0 538 aaPredicted RBP10.14□□□□□ -0.79
PCAT29-204ENST00000560655 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
PCAT29-204ENST00000560655 EVX2Q03828 476 aa10.11□□□□□ -0.79
PCAT29-204ENST00000560655 BAZ1AQ9NRL2 1556 aaPredicted RBP10.1□□□□□ -0.79
PCAT29-204ENST00000560655 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
PCAT29-204ENST00000560655 WIZO95785 1651 aa10.09□□□□□ -0.79
PCAT29-204ENST00000560655 LHX8Q68G74 356 aa10.09□□□□□ -0.79
PCAT29-204ENST00000560655 REM2Q8IYK8 340 aaPredicted RBP10.09□□□□□ -0.79
PCAT29-204ENST00000560655 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PCAT29-204ENST00000560655 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
PCAT29-204ENST00000560655 FXR2P51116 673 aaKnown RBP eCLIP10.03□□□□□ -0.8
PCAT29-204ENST00000560655 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
PCAT29-204ENST00000560655 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
PCAT29-204ENST00000560655 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
PCAT29-204ENST00000560655 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
PCAT29-204ENST00000560655 CCDC88BA6NC98 1476 aa9.94□□□□□ -0.82
PCAT29-204ENST00000560655 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
PCAT29-204ENST00000560655 PEG3Q9GZU2 1588 aa9.92□□□□□ -0.82
PCAT29-204ENST00000560655 SMARCA2P51531 1590 aa9.91□□□□□ -0.82
PCAT29-204ENST00000560655 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
PCAT29-204ENST00000560655 GABBR2O75899 941 aa9.85□□□□□ -0.83
PCAT29-204ENST00000560655 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
PCAT29-204ENST00000560655 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
PCAT29-204ENST00000560655 FAM9AQ8IZU1 332 aaPredicted RBP9.81□□□□□ -0.84
PCAT29-204ENST00000560655 BAZ1BQ9UIG0 1483 aaKnown RBP9.78□□□□□ -0.84
PCAT29-204ENST00000560655 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
PCAT29-204ENST00000560655 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
PCAT29-204ENST00000560655 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
PCAT29-204ENST00000560655 PRKAR2AP13861 404 aaKnown RBP9.74□□□□□ -0.85
PCAT29-204ENST00000560655 HMGXB3Q12766 1538 aa9.69□□□□□ -0.86
PCAT29-204ENST00000560655 PCGF6Q9BYE7 350 aa9.69□□□□□ -0.86
PCAT29-204ENST00000560655 SOGA1O94964 1423 aa9.68□□□□□ -0.86
PCAT29-204ENST00000560655 WRNQ14191 1432 aaPredicted RBP eCLIP9.68□□□□□ -0.86
PCAT29-204ENST00000560655 MYCNP04198 464 aaPredicted RBP9.68□□□□□ -0.86
PCAT29-204ENST00000560655 RUSC2Q8N2Y8 1516 aa9.65□□□□□ -0.86
PCAT29-204ENST00000560655 CSRNP3Q8WYN3 585 aa9.64□□□□□ -0.87
PCAT29-204ENST00000560655 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
PCAT29-204ENST00000560655 EEA1Q15075 1411 aa9.64□□□□□ -0.87
PCAT29-204ENST00000560655 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms