RNA–Protein interactions for RNA: ENST00000560423.5

PRC1-217, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-217ENST00000560423 FBLN2P98095 1184 aa11.82□□□□□ -0.52
PRC1-217ENST00000560423 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
PRC1-217ENST00000560423 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
PRC1-217ENST00000560423 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
PRC1-217ENST00000560423 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
PRC1-217ENST00000560423 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
PRC1-217ENST00000560423 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRC1-217ENST00000560423 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
PRC1-217ENST00000560423 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
PRC1-217ENST00000560423 SP7Q8TDD2 431 aaPredicted RBP11.77□□□□□ -0.53
PRC1-217ENST00000560423 TOPBP1Q92547 1522 aa11.75□□□□□ -0.53
PRC1-217ENST00000560423 HAX1O00165 279 aa11.72□□□□□ -0.53
PRC1-217ENST00000560423 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.545e-9■■■■□ 24.2
PRC1-217ENST00000560423 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
PRC1-217ENST00000560423 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
PRC1-217ENST00000560423 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
PRC1-217ENST00000560423 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
PRC1-217ENST00000560423 POLA1P09884 1462 aaPredicted RBP11.64□□□□□ -0.55
PRC1-217ENST00000560423 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
PRC1-217ENST00000560423 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
PRC1-217ENST00000560423 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
PRC1-217ENST00000560423 SOGA1O94964 1423 aa11.62□□□□□ -0.55
PRC1-217ENST00000560423 CUX1P39880 1505 aa11.61□□□□□ -0.55
PRC1-217ENST00000560423 TARBP1Q13395 1621 aaKnown RBP11.61□□□□□ -0.55
PRC1-217ENST00000560423 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
PRC1-217ENST00000560423 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
PRC1-217ENST00000560423 EVX2Q03828 476 aa11.6□□□□□ -0.55
PRC1-217ENST00000560423 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
PRC1-217ENST00000560423 FGD5Q6ZNL6 1462 aa11.58□□□□□ -0.56
PRC1-217ENST00000560423 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
PRC1-217ENST00000560423 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
PRC1-217ENST00000560423 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
PRC1-217ENST00000560423 CYB5RLQ6IPT4 315 aa11.54□□□□□ -0.56
PRC1-217ENST00000560423 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
PRC1-217ENST00000560423 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
PRC1-217ENST00000560423 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
PRC1-217ENST00000560423 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
PRC1-217ENST00000560423 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
PRC1-217ENST00000560423 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
PRC1-217ENST00000560423 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
PRC1-217ENST00000560423 CHD1O14646 1710 aa11.45□□□□□ -0.58
PRC1-217ENST00000560423 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
PRC1-217ENST00000560423 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
PRC1-217ENST00000560423 ARAP1Q96P48 1450 aa11.44□□□□□ -0.58
PRC1-217ENST00000560423 SYNJ1O43426 1573 aa11.42□□□□□ -0.58
PRC1-217ENST00000560423 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
PRC1-217ENST00000560423 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
PRC1-217ENST00000560423 ABCA10Q8WWZ4 1543 aa11.41□□□□□ -0.58
PRC1-217ENST00000560423 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
PRC1-217ENST00000560423 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
PRC1-217ENST00000560423 CLASP1Q7Z460 1538 aa11.38□□□□□ -0.59
PRC1-217ENST00000560423 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
PRC1-217ENST00000560423 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
PRC1-217ENST00000560423 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
PRC1-217ENST00000560423 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
PRC1-217ENST00000560423 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
PRC1-217ENST00000560423 ERCC6L2Q5T890 1561 aa11.34□□□□□ -0.59
PRC1-217ENST00000560423 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
PRC1-217ENST00000560423 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
PRC1-217ENST00000560423 GRIN2AQ12879 1464 aa11.3□□□□□ -0.6
PRC1-217ENST00000560423 GABBR2O75899 941 aa11.29□□□□□ -0.6
PRC1-217ENST00000560423 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
PRC1-217ENST00000560423 NUP160Q12769 1436 aa11.28□□□□□ -0.6
PRC1-217ENST00000560423 IGF1RP08069 1367 aa11.28□□□□□ -0.6
PRC1-217ENST00000560423 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
PRC1-217ENST00000560423 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
PRC1-217ENST00000560423 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
PRC1-217ENST00000560423 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
PRC1-217ENST00000560423 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.61
PRC1-217ENST00000560423 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
PRC1-217ENST00000560423 PRG4Q92954 1404 aaPredicted RBP11.2□□□□□ -0.62
PRC1-217ENST00000560423 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
PRC1-217ENST00000560423 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
PRC1-217ENST00000560423 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
PRC1-217ENST00000560423 KIF27Q86VH2 1401 aa11.15□□□□□ -0.62
PRC1-217ENST00000560423 SHROOM2Q13796 1616 aa11.14□□□□□ -0.63
PRC1-217ENST00000560423 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
PRC1-217ENST00000560423 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
PRC1-217ENST00000560423 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
PRC1-217ENST00000560423 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
PRC1-217ENST00000560423 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
PRC1-217ENST00000560423 LHX8Q68G74 356 aa11.06□□□□□ -0.64
PRC1-217ENST00000560423 FAM69CQ0P6D2 419 aa11.05□□□□□ -0.64
PRC1-217ENST00000560423 PTPRGP23470 1445 aa11.03□□□□□ -0.64
PRC1-217ENST00000560423 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
PRC1-217ENST00000560423 ADCY10Q96PN6 1610 aa11.02□□□□□ -0.65
PRC1-217ENST00000560423 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
PRC1-217ENST00000560423 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
PRC1-217ENST00000560423 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
PRC1-217ENST00000560423 DISP1Q96F81 1524 aa10.99□□□□□ -0.65
PRC1-217ENST00000560423 CUL7Q14999 1698 aa10.99□□□□□ -0.65
PRC1-217ENST00000560423 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
PRC1-217ENST00000560423 CLCN6P51797 869 aa10.97□□□□□ -0.65
PRC1-217ENST00000560423 P3H3Q8IVL6 736 aa10.97□□□□□ -0.65
PRC1-217ENST00000560423 FAM9AQ8IZU1 332 aaPredicted RBP10.97□□□□□ -0.65
PRC1-217ENST00000560423 ABCC10Q5T3U5 1492 aa10.97□□□□□ -0.65
PRC1-217ENST00000560423 DCBLD2Q96PD2 775 aa10.95□□□□□ -0.66
PRC1-217ENST00000560423 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
PRC1-217ENST00000560423 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
PRC1-217ENST00000560423 KIF13AQ9H1H9 1805 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms