RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-208ENST00000558602 NESP48681 1621 aa7.95□□□□□ -1.14
IDH3A-208ENST00000558602 BIVM-ERCC5R4GMW8 1640 aa7.95□□□□□ -1.14
IDH3A-208ENST00000558602 CUX1P39880 1505 aa7.95□□□□□ -1.14
IDH3A-208ENST00000558602 CSRNP3Q8WYN3 585 aa7.92□□□□□ -1.14
IDH3A-208ENST00000558602 ERCC6Q03468 1493 aa7.91□□□□□ -1.14
IDH3A-208ENST00000558602 EEA1Q15075 1411 aa7.9□□□□□ -1.15
IDH3A-208ENST00000558602 FANCD2Q9BXW9 1451 aa7.9□□□□□ -1.15
IDH3A-208ENST00000558602 LAMC3Q9Y6N6 1575 aa7.87□□□□□ -1.15
IDH3A-208ENST00000558602 ILDR1Q86SU0 546 aaPredicted RBP7.86□□□□□ -1.15
IDH3A-208ENST00000558602 FGD5Q6ZNL6 1462 aa7.84□□□□□ -1.15
IDH3A-208ENST00000558602 KIF21AQ7Z4S6 1674 aa7.83□□□□□ -1.16
IDH3A-208ENST00000558602 KIF21BO75037 1637 aa7.83□□□□□ -1.16
IDH3A-208ENST00000558602 GOLGA3Q08378 1498 aa7.83□□□□□ -1.16
IDH3A-208ENST00000558602 TOPBP1Q92547 1522 aa7.82□□□□□ -1.16
IDH3A-208ENST00000558602 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
IDH3A-208ENST00000558602 TNIKQ9UKE5 1360 aa7.82□□□□□ -1.16
IDH3A-208ENST00000558602 CEP164Q9UPV0 1460 aa7.82□□□□□ -1.16
IDH3A-208ENST00000558602 DNMBPQ6XZF7 1577 aa7.82□□□□□ -1.16
IDH3A-208ENST00000558602 RAPGEF2Q9Y4G8 1499 aa7.82□□□□□ -1.16
IDH3A-208ENST00000558602 PRKAR2AP13861 404 aaKnown RBP7.82□□□□□ -1.16
IDH3A-208ENST00000558602 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
IDH3A-208ENST00000558602 URB2Q14146 1524 aaKnown RBP7.81□□□□□ -1.16
IDH3A-208ENST00000558602 PDS5BQ9NTI5 1447 aa7.8□□□□□ -1.16
IDH3A-208ENST00000558602 CLCN6P51797 869 aa7.8□□□□□ -1.16
IDH3A-208ENST00000558602 CEP162Q5TB80 1403 aa7.8□□□□□ -1.16
IDH3A-208ENST00000558602 KIF27Q86VH2 1401 aa7.8□□□□□ -1.16
IDH3A-208ENST00000558602 POLA1P09884 1462 aaPredicted RBP7.8□□□□□ -1.16
IDH3A-208ENST00000558602 RAD54L2Q9Y4B4 1467 aa7.8□□□□□ -1.16
IDH3A-208ENST00000558602 DCBLD2Q96PD2 775 aa7.79□□□□□ -1.16
IDH3A-208ENST00000558602 PRXQ9BXM0 1461 aa7.79□□□□□ -1.16
IDH3A-208ENST00000558602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-208ENST00000558602 HNRNPUL2Q1KMD3 747 aaKnown RBP7.78□□□□□ -1.16
IDH3A-208ENST00000558602 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-208ENST00000558602 PCGF6Q9BYE7 350 aa7.78□□□□□ -1.16
IDH3A-208ENST00000558602 IGF1RP08069 1367 aa7.77□□□□□ -1.17
IDH3A-208ENST00000558602 CDAN1Q8IWY9 1227 aa7.75□□□□□ -1.17
IDH3A-208ENST00000558602 ERICH3Q5RHP9 1530 aa7.75□□□□□ -1.17
IDH3A-208ENST00000558602 ABCA10Q8WWZ4 1543 aa7.75□□□□□ -1.17
IDH3A-208ENST00000558602 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
IDH3A-208ENST00000558602 WDR97A6NE52 1622 aa7.74□□□□□ -1.17
IDH3A-208ENST00000558602 MMRN1Q13201 1228 aa7.73□□□□□ -1.17
IDH3A-208ENST00000558602 POTEB2H3BUK9 544 aa7.72□□□□□ -1.17
IDH3A-208ENST00000558602 RANGAP1P46060 587 aaPredicted RBP7.72□□□□□ -1.17
IDH3A-208ENST00000558602 POLA2Q14181 598 aa7.72□□□□□ -1.17
IDH3A-208ENST00000558602 CLIP1P30622 1438 aa7.72□□□□□ -1.17
IDH3A-208ENST00000558602 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.17
IDH3A-208ENST00000558602 TARBP1Q13395 1621 aaKnown RBP7.71□□□□□ -1.18
IDH3A-208ENST00000558602 CARMIL1Q5VZK9 1371 aa7.71□□□□□ -1.18
IDH3A-208ENST00000558602 TDRD9Q8NDG6 1382 aaKnown RBP7.71□□□□□ -1.18
IDH3A-208ENST00000558602 MRC2Q9UBG0 1479 aa7.71□□□□□ -1.18
IDH3A-208ENST00000558602 FAM163AQ96GL9 167 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-208ENST00000558602 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
IDH3A-208ENST00000558602 THOC2Q8NI27 1593 aaKnown RBP7.69□□□□□ -1.18
IDH3A-208ENST00000558602 OSCARQ8IYS5 282 aa7.68□□□□□ -1.18
IDH3A-208ENST00000558602 WDR62O43379 1518 aa7.68□□□□□ -1.18
IDH3A-208ENST00000558602 GAPVD1Q14C86 1478 aa7.67□□□□□ -1.18
IDH3A-208ENST00000558602 AQRO60306 1485 aaKnown RBP eCLIP7.66□□□□□ -1.182e-6■■■■■ 26.9
IDH3A-208ENST00000558602 ARAP1Q96P48 1450 aa7.66□□□□□ -1.18
IDH3A-208ENST00000558602 CUL7Q14999 1698 aa7.66□□□□□ -1.18
IDH3A-208ENST00000558602 TTBK1Q5TCY1 1321 aaPredicted RBP7.65□□□□□ -1.18
IDH3A-208ENST00000558602 SLC4A1APQ9BWU0 796 aaKnown RBP7.65□□□□□ -1.18
IDH3A-208ENST00000558602 VPS8Q8N3P4 1428 aa7.65□□□□□ -1.18
IDH3A-208ENST00000558602 ARHGAP35Q9NRY4 1499 aa7.64□□□□□ -1.19
IDH3A-208ENST00000558602 ZNF608Q9ULD9 1512 aaPredicted RBP7.64□□□□□ -1.19
IDH3A-208ENST00000558602 RIMBP3CA6NJZ7 1639 aa7.64□□□□□ -1.19
IDH3A-208ENST00000558602 RIMBP3BA6NNM3 1639 aa7.64□□□□□ -1.19
IDH3A-208ENST00000558602 RIMBP3Q9UFD9 1639 aa7.64□□□□□ -1.19
IDH3A-208ENST00000558602 PBRM1Q86U86 1689 aa7.63□□□□□ -1.19
IDH3A-208ENST00000558602 SAMD1Q6SPF0 538 aaPredicted RBP7.63□□□□□ -1.19
IDH3A-208ENST00000558602 IFT140Q96RY7 1462 aa7.62□□□□□ -1.19
IDH3A-208ENST00000558602 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
IDH3A-208ENST00000558602 NCBP3Q53F19 620 aaKnown RBP7.6□□□□□ -1.19
IDH3A-208ENST00000558602 P3H3Q8IVL6 736 aa7.59□□□□□ -1.19
IDH3A-208ENST00000558602 SPNS2Q8IVW8 549 aa7.59□□□□□ -1.19
IDH3A-208ENST00000558602 EIF4G3O43432 1585 aaKnown RBP7.58□□□□□ -1.2
IDH3A-208ENST00000558602 ADAMTS12P58397 1594 aa7.58□□□□□ -1.2
IDH3A-208ENST00000558602 GRIN2BQ13224 1484 aa7.58□□□□□ -1.2
IDH3A-208ENST00000558602 HRCP23327 699 aa7.58□□□□□ -1.2
IDH3A-208ENST00000558602 ZBTB12Q9Y330 459 aaPredicted RBP7.58□□□□□ -1.2
IDH3A-208ENST00000558602 FHAD1B1AJZ9 1412 aa7.57□□□□□ -1.2
IDH3A-208ENST00000558602 AMER1Q5JTC6 1135 aaPredicted RBP7.57□□□□□ -1.2
IDH3A-208ENST00000558602 KANK4Q5T7N3 995 aaPredicted RBP7.56□□□□□ -1.2
IDH3A-208ENST00000558602 MAMSTRQ6ZN01 415 aa7.56□□□□□ -1.2
IDH3A-208ENST00000558602 SNAPC4Q5SXM2 1469 aa7.55□□□□□ -1.2
IDH3A-208ENST00000558602 FHOD3Q2V2M9 1422 aa7.55□□□□□ -1.2
IDH3A-208ENST00000558602 ARHGEF11O15085 1522 aa7.55□□□□□ -1.2
IDH3A-208ENST00000558602 EFCAB5A4FU69 1503 aa7.53□□□□□ -1.2
IDH3A-208ENST00000558602 SAMD9Q5K651 1589 aa7.53□□□□□ -1.2
IDH3A-208ENST00000558602 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.2
IDH3A-208ENST00000558602 GRIN2AQ12879 1464 aa7.51□□□□□ -1.21
IDH3A-208ENST00000558602 IQGAP2Q13576 1575 aa7.51□□□□□ -1.21
IDH3A-208ENST00000558602 MAGI1Q96QZ7 1491 aaPredicted RBP7.5□□□□□ -1.21
IDH3A-208ENST00000558602 TIAM1Q13009 1591 aa7.5□□□□□ -1.21
IDH3A-208ENST00000558602 LRRIQ1Q96JM4 1722 aa7.49□□□□□ -1.21
IDH3A-208ENST00000558602 CD44P16070 742 aaKnown RBP7.49□□□□□ -1.21
IDH3A-208ENST00000558602 CEP170Q5SW79 1584 aa7.49□□□□□ -1.21
IDH3A-208ENST00000558602 SYNJ2O15056 1496 aa7.48□□□□□ -1.21
IDH3A-208ENST00000558602 ATP1B4Q9UN42 357 aaPredicted RBP7.48□□□□□ -1.21
IDH3A-208ENST00000558602 CASKIN1Q8WXD9 1431 aa7.48□□□□□ -1.21
IDH3A-208ENST00000558602 MAP3K1Q13233 1512 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms