RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
SEMA6D-209ENST00000558431 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
SEMA6D-209ENST00000558431 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.38
SEMA6D-209ENST00000558431 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
SEMA6D-209ENST00000558431 POLA2Q14181 598 aa17.35■□□□□ 0.37
SEMA6D-209ENST00000558431 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
SEMA6D-209ENST00000558431 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
SEMA6D-209ENST00000558431 SOGA1O94964 1423 aa17.33■□□□□ 0.36
SEMA6D-209ENST00000558431 CUX1P39880 1505 aa17.32■□□□□ 0.36
SEMA6D-209ENST00000558431 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
SEMA6D-209ENST00000558431 CHD1O14646 1710 aa17.32■□□□□ 0.36
SEMA6D-209ENST00000558431 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
SEMA6D-209ENST00000558431 FBLN2P98095 1184 aa17.27■□□□□ 0.36
SEMA6D-209ENST00000558431 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
SEMA6D-209ENST00000558431 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
SEMA6D-209ENST00000558431 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
SEMA6D-209ENST00000558431 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
SEMA6D-209ENST00000558431 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
SEMA6D-209ENST00000558431 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
SEMA6D-209ENST00000558431 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
SEMA6D-209ENST00000558431 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
SEMA6D-209ENST00000558431 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
SEMA6D-209ENST00000558431 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
SEMA6D-209ENST00000558431 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
SEMA6D-209ENST00000558431 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
SEMA6D-209ENST00000558431 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
SEMA6D-209ENST00000558431 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
SEMA6D-209ENST00000558431 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
SEMA6D-209ENST00000558431 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
SEMA6D-209ENST00000558431 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
SEMA6D-209ENST00000558431 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
SEMA6D-209ENST00000558431 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
SEMA6D-209ENST00000558431 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
SEMA6D-209ENST00000558431 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
SEMA6D-209ENST00000558431 ARAP1Q96P48 1450 aa17■□□□□ 0.31
SEMA6D-209ENST00000558431 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
SEMA6D-209ENST00000558431 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
SEMA6D-209ENST00000558431 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
SEMA6D-209ENST00000558431 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
SEMA6D-209ENST00000558431 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
SEMA6D-209ENST00000558431 NUP160Q12769 1436 aa16.84■□□□□ 0.29
SEMA6D-209ENST00000558431 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
SEMA6D-209ENST00000558431 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
SEMA6D-209ENST00000558431 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
SEMA6D-209ENST00000558431 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
SEMA6D-209ENST00000558431 CUL7Q14999 1698 aa16.73■□□□□ 0.27
SEMA6D-209ENST00000558431 IGF1RP08069 1367 aa16.71■□□□□ 0.27
SEMA6D-209ENST00000558431 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
SEMA6D-209ENST00000558431 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
SEMA6D-209ENST00000558431 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
SEMA6D-209ENST00000558431 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
SEMA6D-209ENST00000558431 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
SEMA6D-209ENST00000558431 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
SEMA6D-209ENST00000558431 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
SEMA6D-209ENST00000558431 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 IQGAP2Q13576 1575 aa16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 SPDYE6P0CI01 402 aa16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
SEMA6D-209ENST00000558431 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
SEMA6D-209ENST00000558431 ADCY10Q96PN6 1610 aa16.5■□□□□ 0.23
SEMA6D-209ENST00000558431 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
SEMA6D-209ENST00000558431 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
SEMA6D-209ENST00000558431 PTPRGP23470 1445 aa16.46■□□□□ 0.23
SEMA6D-209ENST00000558431 CTTNBP2Q8WZ74 1663 aa16.43■□□□□ 0.22
SEMA6D-209ENST00000558431 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
SEMA6D-209ENST00000558431 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
SEMA6D-209ENST00000558431 FAM69CQ0P6D2 419 aa16.42■□□□□ 0.22
SEMA6D-209ENST00000558431 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
SEMA6D-209ENST00000558431 TSPOAP1O95153 1857 aa16.39■□□□□ 0.22
SEMA6D-209ENST00000558431 DISP1Q96F81 1524 aa16.39■□□□□ 0.21
SEMA6D-209ENST00000558431 DIP2BQ9P265 1576 aa16.38■□□□□ 0.21
SEMA6D-209ENST00000558431 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
SEMA6D-209ENST00000558431 KIAA0556O60303 1618 aa16.36■□□□□ 0.21
SEMA6D-209ENST00000558431 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
SEMA6D-209ENST00000558431 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
SEMA6D-209ENST00000558431 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
SEMA6D-209ENST00000558431 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
SEMA6D-209ENST00000558431 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
SEMA6D-209ENST00000558431 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
SEMA6D-209ENST00000558431 GOLGA3Q08378 1498 aa16.29■□□□□ 0.2
SEMA6D-209ENST00000558431 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
SEMA6D-209ENST00000558431 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
SEMA6D-209ENST00000558431 PLB1Q6P1J6 1458 aa16.27■□□□□ 0.19
SEMA6D-209ENST00000558431 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
SEMA6D-209ENST00000558431 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
SEMA6D-209ENST00000558431 KDM6BO15054 1643 aa16.24■□□□□ 0.19
SEMA6D-209ENST00000558431 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
SEMA6D-209ENST00000558431 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
SEMA6D-209ENST00000558431 EEA1Q15075 1411 aa16.22■□□□□ 0.19
SEMA6D-209ENST00000558431 GLI2P10070 1586 aa16.21■□□□□ 0.18
SEMA6D-209ENST00000558431 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
SEMA6D-209ENST00000558431 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
SEMA6D-209ENST00000558431 ABCA8O94911 1581 aa16.18■□□□□ 0.18
SEMA6D-209ENST00000558431 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
SEMA6D-209ENST00000558431 EPRSP07814 1512 aaKnown RBP16.18■□□□□ 0.18
SEMA6D-209ENST00000558431 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
SEMA6D-209ENST00000558431 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms