RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
SEMA6D-209ENST00000558431 CHIC1Q5VXU3 224 aa28.62■■■□□ 2.17
SEMA6D-209ENST00000558431 SENP3Q9H4L4 574 aaPredicted RBP25.22■■□□□ 1.63
SEMA6D-209ENST00000558431 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
SEMA6D-209ENST00000558431 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
SEMA6D-209ENST00000558431 FOXD1Q16676 465 aa23.42■■□□□ 1.34
SEMA6D-209ENST00000558431 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
SEMA6D-209ENST00000558431 ADRA2BP18089 450 aa22.3■■□□□ 1.16
SEMA6D-209ENST00000558431 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
SEMA6D-209ENST00000558431 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.13
SEMA6D-209ENST00000558431 MSH5O43196 834 aa21.75■■□□□ 1.07
SEMA6D-209ENST00000558431 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
SEMA6D-209ENST00000558431 ABCC9O60706 1549 aa21.29■■□□□ 1
SEMA6D-209ENST00000558431 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
SEMA6D-209ENST00000558431 PPP4R3CPQ6ZMV5 832 aa20.37■□□□□ 0.85
SEMA6D-209ENST00000558431 POTEDQ86YR6 584 aa20.35■□□□□ 0.85
SEMA6D-209ENST00000558431 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
SEMA6D-209ENST00000558431 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
SEMA6D-209ENST00000558431 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
SEMA6D-209ENST00000558431 NACADO15069 1562 aa20.2■□□□□ 0.82
SEMA6D-209ENST00000558431 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
SEMA6D-209ENST00000558431 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
SEMA6D-209ENST00000558431 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
SEMA6D-209ENST00000558431 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
SEMA6D-209ENST00000558431 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
SEMA6D-209ENST00000558431 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
SEMA6D-209ENST00000558431 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
SEMA6D-209ENST00000558431 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
SEMA6D-209ENST00000558431 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
SEMA6D-209ENST00000558431 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
SEMA6D-209ENST00000558431 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
SEMA6D-209ENST00000558431 KCNA4P22459 653 aa19.53■□□□□ 0.72
SEMA6D-209ENST00000558431 RNF216Q9NWF9 866 aaPredicted RBP19.51■□□□□ 0.71
SEMA6D-209ENST00000558431 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
SEMA6D-209ENST00000558431 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
SEMA6D-209ENST00000558431 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
SEMA6D-209ENST00000558431 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
SEMA6D-209ENST00000558431 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
SEMA6D-209ENST00000558431 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
SEMA6D-209ENST00000558431 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
SEMA6D-209ENST00000558431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEMA6D-209ENST00000558431 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
SEMA6D-209ENST00000558431 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
SEMA6D-209ENST00000558431 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
SEMA6D-209ENST00000558431 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
SEMA6D-209ENST00000558431 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
SEMA6D-209ENST00000558431 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
SEMA6D-209ENST00000558431 RNF39Q9H2S5 420 aa18.56■□□□□ 0.56
SEMA6D-209ENST00000558431 HMGXB3Q12766 1538 aa18.51■□□□□ 0.55
SEMA6D-209ENST00000558431 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
SEMA6D-209ENST00000558431 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
SEMA6D-209ENST00000558431 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
SEMA6D-209ENST00000558431 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
SEMA6D-209ENST00000558431 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
SEMA6D-209ENST00000558431 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
SEMA6D-209ENST00000558431 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
SEMA6D-209ENST00000558431 NESP48681 1621 aa18.32■□□□□ 0.52
SEMA6D-209ENST00000558431 WIZO95785 1651 aa18.28■□□□□ 0.52
SEMA6D-209ENST00000558431 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
SEMA6D-209ENST00000558431 CUX2O14529 1486 aa18.24■□□□□ 0.51
SEMA6D-209ENST00000558431 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
SEMA6D-209ENST00000558431 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
SEMA6D-209ENST00000558431 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
SEMA6D-209ENST00000558431 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
SEMA6D-209ENST00000558431 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
SEMA6D-209ENST00000558431 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
SEMA6D-209ENST00000558431 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
SEMA6D-209ENST00000558431 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
SEMA6D-209ENST00000558431 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
SEMA6D-209ENST00000558431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
SEMA6D-209ENST00000558431 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
SEMA6D-209ENST00000558431 MYCNP04198 464 aaPredicted RBP17.98■□□□□ 0.47
SEMA6D-209ENST00000558431 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
SEMA6D-209ENST00000558431 CAPN15O75808 1086 aa17.92■□□□□ 0.46
SEMA6D-209ENST00000558431 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
SEMA6D-209ENST00000558431 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
SEMA6D-209ENST00000558431 ZBTB22O15209 634 aa17.9■□□□□ 0.46
SEMA6D-209ENST00000558431 APLP2Q06481 763 aa17.9■□□□□ 0.46
SEMA6D-209ENST00000558431 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
SEMA6D-209ENST00000558431 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
SEMA6D-209ENST00000558431 CFTRP13569 1480 aa17.88■□□□□ 0.45
SEMA6D-209ENST00000558431 WDR62O43379 1518 aa17.87■□□□□ 0.45
SEMA6D-209ENST00000558431 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
SEMA6D-209ENST00000558431 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
SEMA6D-209ENST00000558431 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
SEMA6D-209ENST00000558431 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
SEMA6D-209ENST00000558431 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
SEMA6D-209ENST00000558431 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
SEMA6D-209ENST00000558431 DSG3P32926 999 aa17.58■□□□□ 0.4
SEMA6D-209ENST00000558431 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
SEMA6D-209ENST00000558431 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
SEMA6D-209ENST00000558431 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
SEMA6D-209ENST00000558431 ABCB7O75027 752 aa17.54■□□□□ 0.4
SEMA6D-209ENST00000558431 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
SEMA6D-209ENST00000558431 IFT140Q96RY7 1462 aa17.52■□□□□ 0.4
SEMA6D-209ENST00000558431 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
SEMA6D-209ENST00000558431 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
SEMA6D-209ENST00000558431 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
SEMA6D-209ENST00000558431 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
SEMA6D-209ENST00000558431 EIF4G3O43432 1585 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms