RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 RIMBP3Q9UFD9 1639 aa7.34□□□□□ -1.23
HMG20A-204ENST00000558288 POLA1P09884 1462 aaPredicted RBP7.33□□□□□ -1.24
HMG20A-204ENST00000558288 SNAPC4Q5SXM2 1469 aa7.32□□□□□ -1.24
HMG20A-204ENST00000558288 APLP2Q06481 763 aa7.32□□□□□ -1.24
HMG20A-204ENST00000558288 FGD5Q6ZNL6 1462 aa7.32□□□□□ -1.24
HMG20A-204ENST00000558288 TNIKQ9UKE5 1360 aa7.32□□□□□ -1.24
HMG20A-204ENST00000558288 EIF4G3O43432 1585 aaKnown RBP7.31□□□□□ -1.24
HMG20A-204ENST00000558288 RANGAP1P46060 587 aaPredicted RBP7.31□□□□□ -1.24
HMG20A-204ENST00000558288 DNMBPQ6XZF7 1577 aa7.3□□□□□ -1.24
HMG20A-204ENST00000558288 ARAP1Q96P48 1450 aa7.27□□□□□ -1.25
HMG20A-204ENST00000558288 FAM69CQ0P6D2 419 aa7.27□□□□□ -1.25
HMG20A-204ENST00000558288 FKBP8Q14318 412 aa7.27□□□□□ -1.25
HMG20A-204ENST00000558288 GAPVD1Q14C86 1478 aa7.27□□□□□ -1.25
HMG20A-204ENST00000558288 GRIN2BQ13224 1484 aa7.26□□□□□ -1.25
HMG20A-204ENST00000558288 CHD1O14646 1710 aa7.25□□□□□ -1.25
HMG20A-204ENST00000558288 ARID3CA6NKF2 412 aa7.25□□□□□ -1.25
HMG20A-204ENST00000558288 NEFLP07196 543 aa7.25□□□□□ -1.25
HMG20A-204ENST00000558288 JPH4Q96JJ6 628 aa7.24□□□□□ -1.25
HMG20A-204ENST00000558288 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
HMG20A-204ENST00000558288 GOLGA3Q08378 1498 aa7.24□□□□□ -1.25
HMG20A-204ENST00000558288 KCNH8Q96L42 1107 aa7.24□□□□□ -1.25
HMG20A-204ENST00000558288 SYNJ1O43426 1573 aa7.23□□□□□ -1.25
HMG20A-204ENST00000558288 PLPPR3Q6T4P5 718 aa7.23□□□□□ -1.25
HMG20A-204ENST00000558288 RBM19Q9Y4C8 960 aaKnown RBP7.23□□□□□ -1.25
HMG20A-204ENST00000558288 ITGAEP38570 1179 aa7.22□□□□□ -1.25
HMG20A-204ENST00000558288 ERICH6Q7L0X2 663 aa7.22□□□□□ -1.25
HMG20A-204ENST00000558288 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
HMG20A-204ENST00000558288 CUX1P39880 1505 aa7.22□□□□□ -1.25
HMG20A-204ENST00000558288 EEA1Q15075 1411 aa7.21□□□□□ -1.25
HMG20A-204ENST00000558288 CLIP1P30622 1438 aa7.21□□□□□ -1.26
HMG20A-204ENST00000558288 MAGI1Q96QZ7 1491 aaPredicted RBP7.2□□□□□ -1.26
HMG20A-204ENST00000558288 TARBP1Q13395 1621 aaKnown RBP7.19□□□□□ -1.26
HMG20A-204ENST00000558288 DHX57Q6P158 1386 aaKnown RBP7.19□□□□□ -1.26
HMG20A-204ENST00000558288 PRG4Q92954 1404 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-204ENST00000558288 PRDM2Q13029 1718 aa7.18□□□□□ -1.26
HMG20A-204ENST00000558288 ATP1B4Q9UN42 357 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-204ENST00000558288 VPS8Q8N3P4 1428 aa7.17□□□□□ -1.26
HMG20A-204ENST00000558288 P3H3Q8IVL6 736 aa7.17□□□□□ -1.26
HMG20A-204ENST00000558288 DDX10Q13206 875 aaKnown RBP7.16□□□□□ -1.26
HMG20A-204ENST00000558288 TRIM52Q96A61 297 aa7.16□□□□□ -1.26
HMG20A-204ENST00000558288 GRIN2AQ12879 1464 aa7.15□□□□□ -1.26
HMG20A-204ENST00000558288 FHAD1B1AJZ9 1412 aa7.14□□□□□ -1.27
HMG20A-204ENST00000558288 MSH5O43196 834 aa7.13□□□□□ -1.27
HMG20A-204ENST00000558288 ERCC6L2Q5T890 1561 aa7.13□□□□□ -1.27
HMG20A-204ENST00000558288 MYT1LQ9UL68 1186 aa7.12□□□□□ -1.27
HMG20A-204ENST00000558288 ABCA10Q8WWZ4 1543 aa7.12□□□□□ -1.27
HMG20A-204ENST00000558288 CDK11AQ9UQ88 783 aaPredicted RBP7.11□□□□□ -1.27
HMG20A-204ENST00000558288 HIRIP3Q9BW71 556 aaPredicted RBP7.11□□□□□ -1.27
HMG20A-204ENST00000558288 PTPRGP23470 1445 aa7.11□□□□□ -1.27
HMG20A-204ENST00000558288 IRX6P78412 446 aaPredicted RBP7.1□□□□□ -1.27
HMG20A-204ENST00000558288 ARID4BQ4LE39 1312 aaPredicted RBP7.1□□□□□ -1.27
HMG20A-204ENST00000558288 ANP32CO43423 234 aa7.1□□□□□ -1.27
HMG20A-204ENST00000558288 KANK4Q5T7N3 995 aaPredicted RBP7.1□□□□□ -1.27
HMG20A-204ENST00000558288 KIF27Q86VH2 1401 aa7.1□□□□□ -1.27
HMG20A-204ENST00000558288 CLASP1Q7Z460 1538 aa7.09□□□□□ -1.27
HMG20A-204ENST00000558288 RAPGEF2Q9Y4G8 1499 aa7.09□□□□□ -1.27
HMG20A-204ENST00000558288 PBRM1Q86U86 1689 aa7.09□□□□□ -1.28
HMG20A-204ENST00000558288 CEP170Q5SW79 1584 aa7.08□□□□□ -1.28
HMG20A-204ENST00000558288 CARMIL1Q5VZK9 1371 aa7.08□□□□□ -1.28
HMG20A-204ENST00000558288 KIF21BO75037 1637 aa7.08□□□□□ -1.28
HMG20A-204ENST00000558288 PRKCSHP14314 528 aaPredicted RBP7.08□□□□□ -1.28
HMG20A-204ENST00000558288 CARMIL2Q6F5E8 1435 aa7.07□□□□□ -1.28
HMG20A-204ENST00000558288 DEKP35659 375 aaKnown RBP7.06□□□□□ -1.28
HMG20A-204ENST00000558288 FANCIQ9NVI1 1328 aa7.06□□□□□ -1.28
HMG20A-204ENST00000558288 SIN3AQ96ST3 1273 aa7.05□□□□□ -1.28
HMG20A-204ENST00000558288 SENP3Q9H4L4 574 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-204ENST00000558288 HNRNPUQ00839 825 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMG20A-204ENST00000558288 TSPOAP1O95153 1857 aa7.04□□□□□ -1.28
HMG20A-204ENST00000558288 NUP160Q12769 1436 aa7.04□□□□□ -1.28
HMG20A-204ENST00000558288 ADAMTS12P58397 1594 aa7.04□□□□□ -1.28
HMG20A-204ENST00000558288 CCNB3Q8WWL7 1395 aa7.04□□□□□ -1.28
HMG20A-204ENST00000558288 NBR1Q14596 966 aa7.04□□□□□ -1.28
HMG20A-204ENST00000558288 IGF1RP08069 1367 aa7.04□□□□□ -1.28
HMG20A-204ENST00000558288 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
HMG20A-204ENST00000558288 CCER2I3L3R5 266 aa7.03□□□□□ -1.28
HMG20A-204ENST00000558288 MLECQ14165 292 aa7.03□□□□□ -1.28
HMG20A-204ENST00000558288 ABCA5Q8WWZ7 1642 aa7.03□□□□□ -1.28
HMG20A-204ENST00000558288 PPP1R15AO75807 674 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-204ENST00000558288 TOP2BQ02880 1626 aa7.02□□□□□ -1.29
HMG20A-204ENST00000558288 FAM50AQ14320 339 aaKnown RBP7.02□□□□□ -1.29
HMG20A-204ENST00000558288 WDR97A6NE52 1622 aa7.01□□□□□ -1.29
HMG20A-204ENST00000558288 RRBP1Q9P2E9 1410 aaKnown RBP7.01□□□□□ -1.29
HMG20A-204ENST00000558288 ERICH3Q5RHP9 1530 aa7.01□□□□□ -1.29
HMG20A-204ENST00000558288 KDM4FA0A1W2PPD8 638 aa7.01□□□□□ -1.29
HMG20A-204ENST00000558288 ILDR1Q86SU0 546 aaPredicted RBP7□□□□□ -1.29
HMG20A-204ENST00000558288 KIAA0586Q9BVV6 1533 aa6.99□□□□□ -1.29
HMG20A-204ENST00000558288 KDM6BO15054 1643 aa6.99□□□□□ -1.29
HMG20A-204ENST00000558288 MAPKBP1O60336 1514 aa6.98□□□□□ -1.29
HMG20A-204ENST00000558288 ASXL2Q76L83 1435 aa6.98□□□□□ -1.29
HMG20A-204ENST00000558288 ABCC10Q5T3U5 1492 aa6.98□□□□□ -1.29
HMG20A-204ENST00000558288 B4GALNT3Q6L9W6 998 aa6.98□□□□□ -1.29
HMG20A-204ENST00000558288 NOP58Q9Y2X3 529 aaKnown RBP6.98□□□□□ -1.29
HMG20A-204ENST00000558288 SETD5Q9C0A6 1442 aa6.97□□□□□ -1.29
HMG20A-204ENST00000558288 ANO8Q9HCE9 1232 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-204ENST00000558288 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
HMG20A-204ENST00000558288 RTL5Q5HYW3 569 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-204ENST00000558288 UACAQ9BZF9 1416 aa6.96□□□□□ -1.3
HMG20A-204ENST00000558288 RAPGEF3O95398 923 aa6.95□□□□□ -1.3
HMG20A-204ENST00000558288 TONSLQ96HA7 1378 aa6.95□□□□□ -1.3
HMG20A-204ENST00000558288 BIVM-ERCC5R4GMW8 1640 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms