RNA–Protein interactions for RNA: ENST00000557460.5

SRSF5-219, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 5

Gene SRSF5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-219ENST00000557460 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
SRSF5-219ENST00000557460 NESP48681 1621 aa14.72□□□□□ -0.05
SRSF5-219ENST00000557460 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
SRSF5-219ENST00000557460 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
SRSF5-219ENST00000557460 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
SRSF5-219ENST00000557460 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
SRSF5-219ENST00000557460 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
SRSF5-219ENST00000557460 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
SRSF5-219ENST00000557460 TOP2BQ02880 1626 aa14.64□□□□□ -0.07
SRSF5-219ENST00000557460 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
SRSF5-219ENST00000557460 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SRSF5-219ENST00000557460 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
SRSF5-219ENST00000557460 BIVM-ERCC5R4GMW8 1640 aa14.62□□□□□ -0.07
SRSF5-219ENST00000557460 CUX1P39880 1505 aa14.61□□□□□ -0.07
SRSF5-219ENST00000557460 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
SRSF5-219ENST00000557460 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
SRSF5-219ENST00000557460 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
SRSF5-219ENST00000557460 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
SRSF5-219ENST00000557460 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.08
SRSF5-219ENST00000557460 PRR29P0C7W0 189 aa14.52□□□□□ -0.09
SRSF5-219ENST00000557460 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
SRSF5-219ENST00000557460 EEA1Q15075 1411 aa14.5□□□□□ -0.09
SRSF5-219ENST00000557460 FGD5Q6ZNL6 1462 aa14.47□□□□□ -0.09
SRSF5-219ENST00000557460 VASPP50552 380 aaPredicted RBP14.47□□□□□ -0.09
SRSF5-219ENST00000557460 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
SRSF5-219ENST00000557460 WDR62O43379 1518 aa14.46□□□□□ -0.1
SRSF5-219ENST00000557460 SOGA1O94964 1423 aa14.45□□□□□ -0.1
SRSF5-219ENST00000557460 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
SRSF5-219ENST00000557460 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
SRSF5-219ENST00000557460 THOC2Q8NI27 1593 aaKnown RBP14.4□□□□□ -0.1
SRSF5-219ENST00000557460 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
SRSF5-219ENST00000557460 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
SRSF5-219ENST00000557460 PIP4P2Q8N4L2 257 aa14.39□□□□□ -0.11
SRSF5-219ENST00000557460 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
SRSF5-219ENST00000557460 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
SRSF5-219ENST00000557460 MIER1Q8N108 512 aa14.35□□□□□ -0.11
SRSF5-219ENST00000557460 CUX2O14529 1486 aa14.35□□□□□ -0.11
SRSF5-219ENST00000557460 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
SRSF5-219ENST00000557460 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
SRSF5-219ENST00000557460 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
SRSF5-219ENST00000557460 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
SRSF5-219ENST00000557460 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
SRSF5-219ENST00000557460 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
SRSF5-219ENST00000557460 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
SRSF5-219ENST00000557460 CHADLQ6NUI6 762 aa14.31□□□□□ -0.12
SRSF5-219ENST00000557460 MNX1P50219 401 aaPredicted RBP14.3□□□□□ -0.12
SRSF5-219ENST00000557460 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
SRSF5-219ENST00000557460 IGF1RP08069 1367 aa14.29□□□□□ -0.12
SRSF5-219ENST00000557460 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
SRSF5-219ENST00000557460 KIF21BO75037 1637 aa14.26□□□□□ -0.13
SRSF5-219ENST00000557460 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
SRSF5-219ENST00000557460 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
SRSF5-219ENST00000557460 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
SRSF5-219ENST00000557460 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
SRSF5-219ENST00000557460 TDRD9Q8NDG6 1382 aaKnown RBP14.23□□□□□ -0.13
SRSF5-219ENST00000557460 ERICH3Q5RHP9 1530 aa14.23□□□□□ -0.13
SRSF5-219ENST00000557460 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
SRSF5-219ENST00000557460 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
SRSF5-219ENST00000557460 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
SRSF5-219ENST00000557460 CARMIL1Q5VZK9 1371 aa14.19□□□□□ -0.14
SRSF5-219ENST00000557460 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
SRSF5-219ENST00000557460 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
SRSF5-219ENST00000557460 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
SRSF5-219ENST00000557460 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.143e-8■■■■□ 24.7
SRSF5-219ENST00000557460 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
SRSF5-219ENST00000557460 CUL7Q14999 1698 aa14.17□□□□□ -0.14
SRSF5-219ENST00000557460 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
SRSF5-219ENST00000557460 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
SRSF5-219ENST00000557460 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
SRSF5-219ENST00000557460 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
SRSF5-219ENST00000557460 POTEHQ6S545 545 aa14.1□□□□□ -0.15
SRSF5-219ENST00000557460 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
SRSF5-219ENST00000557460 MAGI1Q96QZ7 1491 aaPredicted RBP14.09□□□□□ -0.15
SRSF5-219ENST00000557460 UBTFP17480 764 aaKnown RBP14.08□□□□□ -0.16
SRSF5-219ENST00000557460 NUBP1P53384 320 aa14.08□□□□□ -0.16
SRSF5-219ENST00000557460 SPOCK2Q92563 424 aa14.08□□□□□ -0.16
SRSF5-219ENST00000557460 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
SRSF5-219ENST00000557460 CEP162Q5TB80 1403 aa14.04□□□□□ -0.16
SRSF5-219ENST00000557460 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
SRSF5-219ENST00000557460 SYNJ2O15056 1496 aa14.02□□□□□ -0.16
SRSF5-219ENST00000557460 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
SRSF5-219ENST00000557460 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
SRSF5-219ENST00000557460 CLIP1P30622 1438 aa13.98□□□□□ -0.17
SRSF5-219ENST00000557460 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
SRSF5-219ENST00000557460 NUP160Q12769 1436 aa13.93□□□□□ -0.18
SRSF5-219ENST00000557460 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
SRSF5-219ENST00000557460 KIAA0586Q9BVV6 1533 aa13.93□□□□□ -0.18
SRSF5-219ENST00000557460 CTTNBP2Q8WZ74 1663 aa13.92□□□□□ -0.18
SRSF5-219ENST00000557460 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
SRSF5-219ENST00000557460 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
SRSF5-219ENST00000557460 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
SRSF5-219ENST00000557460 EFCAB5A4FU69 1503 aa13.9□□□□□ -0.19
SRSF5-219ENST00000557460 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
SRSF5-219ENST00000557460 GSE1Q14687 1217 aa13.87□□□□□ -0.19
SRSF5-219ENST00000557460 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
SRSF5-219ENST00000557460 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
SRSF5-219ENST00000557460 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
SRSF5-219ENST00000557460 VPS8Q8N3P4 1428 aa13.86□□□□□ -0.19
SRSF5-219ENST00000557460 CEP170Q5SW79 1584 aa13.86□□□□□ -0.19
SRSF5-219ENST00000557460 SAMD9Q5K651 1589 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms