RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 FANCD2Q9BXW9 1451 aa11.3□□□□□ -0.6
SV2B-206ENST00000557410 BCANQ96GW7 911 aa11.27□□□□□ -0.61
SV2B-206ENST00000557410 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
SV2B-206ENST00000557410 CNGB1Q14028 1251 aaPredicted RBP11.25□□□□□ -0.61
SV2B-206ENST00000557410 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
SV2B-206ENST00000557410 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
SV2B-206ENST00000557410 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
SV2B-206ENST00000557410 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
SV2B-206ENST00000557410 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
SV2B-206ENST00000557410 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
SV2B-206ENST00000557410 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
SV2B-206ENST00000557410 NESP48681 1621 aa11.22□□□□□ -0.61
SV2B-206ENST00000557410 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
SV2B-206ENST00000557410 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
SV2B-206ENST00000557410 TOPBP1Q92547 1522 aa11.21□□□□□ -0.61
SV2B-206ENST00000557410 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.62
SV2B-206ENST00000557410 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
SV2B-206ENST00000557410 FHOD3Q2V2M9 1422 aa11.2□□□□□ -0.62
SV2B-206ENST00000557410 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
SV2B-206ENST00000557410 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
SV2B-206ENST00000557410 SETD5Q9C0A6 1442 aa11.18□□□□□ -0.62
SV2B-206ENST00000557410 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
SV2B-206ENST00000557410 CUL7Q14999 1698 aa11.15□□□□□ -0.62
SV2B-206ENST00000557410 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
SV2B-206ENST00000557410 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
SV2B-206ENST00000557410 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
SV2B-206ENST00000557410 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
SV2B-206ENST00000557410 CASKIN1Q8WXD9 1431 aa11.13□□□□□ -0.63
SV2B-206ENST00000557410 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
SV2B-206ENST00000557410 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
SV2B-206ENST00000557410 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
SV2B-206ENST00000557410 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
SV2B-206ENST00000557410 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
SV2B-206ENST00000557410 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
SV2B-206ENST00000557410 SIN3AQ96ST3 1273 aa11.11□□□□□ -0.63
SV2B-206ENST00000557410 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
SV2B-206ENST00000557410 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
SV2B-206ENST00000557410 AQRO60306 1485 aaKnown RBP eCLIP11.1□□□□□ -0.63
SV2B-206ENST00000557410 MTUS2Q5JR59 1369 aa11.09□□□□□ -0.63
SV2B-206ENST00000557410 GAPVD1Q14C86 1478 aa11.08□□□□□ -0.64
SV2B-206ENST00000557410 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
SV2B-206ENST00000557410 ANP32CO43423 234 aa11.06□□□□□ -0.64
SV2B-206ENST00000557410 FGD6Q6ZV73 1430 aa11.05□□□□□ -0.64
SV2B-206ENST00000557410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.05□□□□□ -0.64
SV2B-206ENST00000557410 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
SV2B-206ENST00000557410 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
SV2B-206ENST00000557410 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
SV2B-206ENST00000557410 DDX10Q13206 875 aaKnown RBP11.03□□□□□ -0.64
SV2B-206ENST00000557410 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
SV2B-206ENST00000557410 TRIM52Q96A61 297 aa11.02□□□□□ -0.65
SV2B-206ENST00000557410 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
SV2B-206ENST00000557410 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
SV2B-206ENST00000557410 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
SV2B-206ENST00000557410 FKBP8Q14318 412 aa11□□□□□ -0.65
SV2B-206ENST00000557410 NCOA2Q15596 1464 aa11□□□□□ -0.65
SV2B-206ENST00000557410 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
SV2B-206ENST00000557410 HIRIP3Q9BW71 556 aaPredicted RBP11□□□□□ -0.65
SV2B-206ENST00000557410 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
SV2B-206ENST00000557410 TONSLQ96HA7 1378 aa10.99□□□□□ -0.65
SV2B-206ENST00000557410 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
SV2B-206ENST00000557410 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
SV2B-206ENST00000557410 MYOM3Q5VTT5 1437 aa10.99□□□□□ -0.65
SV2B-206ENST00000557410 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
SV2B-206ENST00000557410 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
SV2B-206ENST00000557410 SUPT6HQ7KZ85 1726 aaKnown RBP10.98□□□□□ -0.65
SV2B-206ENST00000557410 LRRIQ1Q96JM4 1722 aa10.97□□□□□ -0.65
SV2B-206ENST00000557410 PTPRKQ15262 1439 aa10.97□□□□□ -0.65
SV2B-206ENST00000557410 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
SV2B-206ENST00000557410 EHBP1L1Q8N3D4 1523 aa10.96□□□□□ -0.65
SV2B-206ENST00000557410 THOC2Q8NI27 1593 aaKnown RBP10.96□□□□□ -0.65
SV2B-206ENST00000557410 UACAQ9BZF9 1416 aa10.95□□□□□ -0.66
SV2B-206ENST00000557410 TARBP1Q13395 1621 aaKnown RBP10.95□□□□□ -0.66
SV2B-206ENST00000557410 PTPN23Q9H3S7 1636 aa10.95□□□□□ -0.66
SV2B-206ENST00000557410 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
SV2B-206ENST00000557410 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
SV2B-206ENST00000557410 SUPT16HQ9Y5B9 1047 aaKnown RBP10.95□□□□□ -0.66
SV2B-206ENST00000557410 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
SV2B-206ENST00000557410 NAIPQ13075 1403 aa10.93□□□□□ -0.66
SV2B-206ENST00000557410 PBRM1Q86U86 1689 aa10.93□□□□□ -0.66
SV2B-206ENST00000557410 IQGAP2Q13576 1575 aa10.92□□□□□ -0.66
SV2B-206ENST00000557410 ZNF326Q5BKZ1 582 aaKnown RBP10.92□□□□□ -0.66
SV2B-206ENST00000557410 UGGT2Q9NYU1 1516 aa10.92□□□□□ -0.66
SV2B-206ENST00000557410 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
SV2B-206ENST00000557410 MAGI3Q5TCQ9 1506 aa10.9□□□□□ -0.66
SV2B-206ENST00000557410 MRC2Q9UBG0 1479 aa10.89□□□□□ -0.67
SV2B-206ENST00000557410 EPRSP07814 1512 aaKnown RBP10.89□□□□□ -0.67
SV2B-206ENST00000557410 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
SV2B-206ENST00000557410 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
SV2B-206ENST00000557410 ARHGEF11O15085 1522 aa10.87□□□□□ -0.67
SV2B-206ENST00000557410 HNRNPUQ00839 825 aaKnown RBP eCLIP10.87□□□□□ -0.67
SV2B-206ENST00000557410 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
SV2B-206ENST00000557410 CCER2I3L3R5 266 aa10.86□□□□□ -0.67
SV2B-206ENST00000557410 TCOF1Q13428 1488 aaKnown RBP10.86□□□□□ -0.67
SV2B-206ENST00000557410 WDR62O43379 1518 aa10.84□□□□□ -0.67
SV2B-206ENST00000557410 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
SV2B-206ENST00000557410 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
SV2B-206ENST00000557410 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
SV2B-206ENST00000557410 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
SV2B-206ENST00000557410 MPHOSPH9Q99550 1183 aa10.83□□□□□ -0.68
SV2B-206ENST00000557410 FOXD1Q16676 465 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms