RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 ITGAEP38570 1179 aa11.71□□□□□ -0.54
SAMD4A-211ENST00000557013 FKBP8Q14318 412 aa11.69□□□□□ -0.54
SAMD4A-211ENST00000557013 TOPBP1Q92547 1522 aa11.68□□□□□ -0.54
SAMD4A-211ENST00000557013 NEFLP07196 543 aa11.67□□□□□ -0.54
SAMD4A-211ENST00000557013 NBR1Q14596 966 aa11.67□□□□□ -0.54
SAMD4A-211ENST00000557013 CLIP1P30622 1438 aa11.67□□□□□ -0.54
SAMD4A-211ENST00000557013 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
SAMD4A-211ENST00000557013 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
SAMD4A-211ENST00000557013 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
SAMD4A-211ENST00000557013 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
SAMD4A-211ENST00000557013 UBE2Q2Q8WVN8 375 aa11.62□□□□□ -0.55
SAMD4A-211ENST00000557013 VPS8Q8N3P4 1428 aa11.6□□□□□ -0.55
SAMD4A-211ENST00000557013 RAD54L2Q9Y4B4 1467 aa11.6□□□□□ -0.55
SAMD4A-211ENST00000557013 MSH5O43196 834 aa11.6□□□□□ -0.55
SAMD4A-211ENST00000557013 POLA1P09884 1462 aaPredicted RBP11.6□□□□□ -0.55
SAMD4A-211ENST00000557013 CUX1P39880 1505 aa11.59□□□□□ -0.55
SAMD4A-211ENST00000557013 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
SAMD4A-211ENST00000557013 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
SAMD4A-211ENST00000557013 FGD5Q6ZNL6 1462 aa11.58□□□□□ -0.56
SAMD4A-211ENST00000557013 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.56
SAMD4A-211ENST00000557013 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
SAMD4A-211ENST00000557013 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
SAMD4A-211ENST00000557013 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
SAMD4A-211ENST00000557013 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
SAMD4A-211ENST00000557013 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
SAMD4A-211ENST00000557013 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
SAMD4A-211ENST00000557013 RAPGEF2Q9Y4G8 1499 aa11.53□□□□□ -0.56
SAMD4A-211ENST00000557013 IL27Q8NEV9 243 aa11.52□□□□□ -0.56
SAMD4A-211ENST00000557013 TARBP1Q13395 1621 aaKnown RBP11.52□□□□□ -0.57
SAMD4A-211ENST00000557013 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.57
SAMD4A-211ENST00000557013 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
SAMD4A-211ENST00000557013 KIF21BO75037 1637 aa11.5□□□□□ -0.57
SAMD4A-211ENST00000557013 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
SAMD4A-211ENST00000557013 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
SAMD4A-211ENST00000557013 CDK11AQ9UQ88 783 aaPredicted RBP11.48□□□□□ -0.57
SAMD4A-211ENST00000557013 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
SAMD4A-211ENST00000557013 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
SAMD4A-211ENST00000557013 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
SAMD4A-211ENST00000557013 TOP2BQ02880 1626 aa11.44□□□□□ -0.58
SAMD4A-211ENST00000557013 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
SAMD4A-211ENST00000557013 CHMP7Q8WUX9 453 aaPredicted RBP11.42□□□□□ -0.58
SAMD4A-211ENST00000557013 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
SAMD4A-211ENST00000557013 GAPVD1Q14C86 1478 aa11.42□□□□□ -0.58
SAMD4A-211ENST00000557013 CHD1O14646 1710 aa11.41□□□□□ -0.58
SAMD4A-211ENST00000557013 WDR97A6NE52 1622 aa11.4□□□□□ -0.58
SAMD4A-211ENST00000557013 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.59
SAMD4A-211ENST00000557013 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
SAMD4A-211ENST00000557013 AEBP2Q6ZN18 517 aaPredicted RBP11.39□□□□□ -0.59
SAMD4A-211ENST00000557013 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
SAMD4A-211ENST00000557013 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
SAMD4A-211ENST00000557013 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
SAMD4A-211ENST00000557013 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
SAMD4A-211ENST00000557013 CCNB3Q8WWL7 1395 aa11.36□□□□□ -0.59
SAMD4A-211ENST00000557013 TRIM52Q96A61 297 aa11.36□□□□□ -0.59
SAMD4A-211ENST00000557013 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
SAMD4A-211ENST00000557013 ARAP1Q96P48 1450 aa11.35□□□□□ -0.59
SAMD4A-211ENST00000557013 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
SAMD4A-211ENST00000557013 MAGI1Q96QZ7 1491 aaPredicted RBP11.34□□□□□ -0.59
SAMD4A-211ENST00000557013 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
SAMD4A-211ENST00000557013 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
SAMD4A-211ENST00000557013 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
SAMD4A-211ENST00000557013 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
SAMD4A-211ENST00000557013 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
SAMD4A-211ENST00000557013 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
SAMD4A-211ENST00000557013 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
SAMD4A-211ENST00000557013 FAM50AQ14320 339 aaKnown RBP11.31□□□□□ -0.6
SAMD4A-211ENST00000557013 GLIPR1L2Q4G1C9 344 aa11.31□□□□□ -0.6
SAMD4A-211ENST00000557013 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
SAMD4A-211ENST00000557013 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
SAMD4A-211ENST00000557013 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
SAMD4A-211ENST00000557013 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
SAMD4A-211ENST00000557013 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
SAMD4A-211ENST00000557013 RIMBP3CA6NJZ7 1639 aa11.28□□□□□ -0.6
SAMD4A-211ENST00000557013 RIMBP3BA6NNM3 1639 aa11.28□□□□□ -0.6
SAMD4A-211ENST00000557013 RIMBP3Q9UFD9 1639 aa11.28□□□□□ -0.6
SAMD4A-211ENST00000557013 ADAMTS12P58397 1594 aa11.27□□□□□ -0.6
SAMD4A-211ENST00000557013 ERICH3Q5RHP9 1530 aa11.27□□□□□ -0.61
SAMD4A-211ENST00000557013 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
SAMD4A-211ENST00000557013 ANP32CO43423 234 aa11.27□□□□□ -0.61
SAMD4A-211ENST00000557013 KIF27Q86VH2 1401 aa11.27□□□□□ -0.61
SAMD4A-211ENST00000557013 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
SAMD4A-211ENST00000557013 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
SAMD4A-211ENST00000557013 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
SAMD4A-211ENST00000557013 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
SAMD4A-211ENST00000557013 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
SAMD4A-211ENST00000557013 ARHGAP35Q9NRY4 1499 aa11.22□□□□□ -0.61
SAMD4A-211ENST00000557013 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
SAMD4A-211ENST00000557013 PPP1R15AO75807 674 aaPredicted RBP11.22□□□□□ -0.61
SAMD4A-211ENST00000557013 IGF1RP08069 1367 aa11.22□□□□□ -0.61
SAMD4A-211ENST00000557013 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
SAMD4A-211ENST00000557013 CEP170Q5SW79 1584 aa11.21□□□□□ -0.61
SAMD4A-211ENST00000557013 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
SAMD4A-211ENST00000557013 MAPKBP1O60336 1514 aa11.21□□□□□ -0.62
SAMD4A-211ENST00000557013 ANP32AP39687 249 aaKnown RBP11.21□□□□□ -0.62
SAMD4A-211ENST00000557013 ZMYND15Q9H091 742 aa11.19□□□□□ -0.62
SAMD4A-211ENST00000557013 LAS1LQ9Y4W2 734 aaKnown RBP11.19□□□□□ -0.62
SAMD4A-211ENST00000557013 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
SAMD4A-211ENST00000557013 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
SAMD4A-211ENST00000557013 NEFMP07197 916 aa11.18□□□□□ -0.62
SAMD4A-211ENST00000557013 BRPF3Q9ULD4 1205 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms