RNA–Protein interactions for RNA: ENST00000556989.1

NUMB-224, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-224ENST00000556989 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
NUMB-224ENST00000556989 SPDYE2Q495Y8 402 aa10.42□□□□□ -0.74
NUMB-224ENST00000556989 CUX1P39880 1505 aa10.4□□□□□ -0.74
NUMB-224ENST00000556989 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.74
NUMB-224ENST00000556989 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
NUMB-224ENST00000556989 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
NUMB-224ENST00000556989 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
NUMB-224ENST00000556989 TRIM41Q8WV44 630 aa10.34□□□□□ -0.75
NUMB-224ENST00000556989 PDS5BQ9NTI5 1447 aa10.33□□□□□ -0.76
NUMB-224ENST00000556989 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
NUMB-224ENST00000556989 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
NUMB-224ENST00000556989 URB2Q14146 1524 aaKnown RBP10.31□□□□□ -0.76
NUMB-224ENST00000556989 TOPBP1Q92547 1522 aa10.31□□□□□ -0.76
NUMB-224ENST00000556989 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
NUMB-224ENST00000556989 FGD5Q6ZNL6 1462 aa10.28□□□□□ -0.76
NUMB-224ENST00000556989 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.76
NUMB-224ENST00000556989 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
NUMB-224ENST00000556989 WDR62O43379 1518 aa10.27□□□□□ -0.77
NUMB-224ENST00000556989 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
NUMB-224ENST00000556989 POLA1P09884 1462 aaPredicted RBP10.25□□□□□ -0.77
NUMB-224ENST00000556989 SOGA1O94964 1423 aa10.24□□□□□ -0.77
NUMB-224ENST00000556989 RUSC2Q8N2Y8 1516 aa10.23□□□□□ -0.77
NUMB-224ENST00000556989 EEA1Q15075 1411 aa10.23□□□□□ -0.77
NUMB-224ENST00000556989 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
NUMB-224ENST00000556989 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
NUMB-224ENST00000556989 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
NUMB-224ENST00000556989 TARBP1Q13395 1621 aaKnown RBP10.21□□□□□ -0.77
NUMB-224ENST00000556989 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.78
NUMB-224ENST00000556989 ABCA5Q8WWZ7 1642 aa10.2□□□□□ -0.78
NUMB-224ENST00000556989 KIF21BO75037 1637 aa10.2□□□□□ -0.78
NUMB-224ENST00000556989 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
NUMB-224ENST00000556989 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
NUMB-224ENST00000556989 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
NUMB-224ENST00000556989 CUX2O14529 1486 aa10.16□□□□□ -0.78
NUMB-224ENST00000556989 KIF27Q86VH2 1401 aa10.15□□□□□ -0.78
NUMB-224ENST00000556989 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
NUMB-224ENST00000556989 CUL7Q14999 1698 aa10.13□□□□□ -0.79
NUMB-224ENST00000556989 ERICH3Q5RHP9 1530 aa10.12□□□□□ -0.79
NUMB-224ENST00000556989 EIF4G3O43432 1585 aaKnown RBP10.12□□□□□ -0.79
NUMB-224ENST00000556989 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
NUMB-224ENST00000556989 GOLGA3Q08378 1498 aa10.1□□□□□ -0.79
NUMB-224ENST00000556989 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
NUMB-224ENST00000556989 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
NUMB-224ENST00000556989 RAPGEF2Q9Y4G8 1499 aa10.08□□□□□ -0.8
NUMB-224ENST00000556989 HAX1O00165 279 aa10.08□□□□□ -0.8
NUMB-224ENST00000556989 LOC105371045A0A1W2PR82 267 aa10.06□□□□□ -0.8
NUMB-224ENST00000556989 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
NUMB-224ENST00000556989 ADAMTS12P58397 1594 aa10.06□□□□□ -0.8
NUMB-224ENST00000556989 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
NUMB-224ENST00000556989 CTTNBP2Q8WZ74 1663 aa10.05□□□□□ -0.8
NUMB-224ENST00000556989 PRR29P0C7W0 189 aa10.05□□□□□ -0.8
NUMB-224ENST00000556989 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
NUMB-224ENST00000556989 IGF1RP08069 1367 aa10.03□□□□□ -0.8
NUMB-224ENST00000556989 TDRD9Q8NDG6 1382 aaKnown RBP10.03□□□□□ -0.8
NUMB-224ENST00000556989 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.8
NUMB-224ENST00000556989 AQRO60306 1485 aaKnown RBP eCLIP10□□□□□ -0.812e-8■■■■■ 27.9
NUMB-224ENST00000556989 GRIN2BQ13224 1484 aa10□□□□□ -0.81
NUMB-224ENST00000556989 TNIKQ9UKE5 1360 aa10□□□□□ -0.81
NUMB-224ENST00000556989 CHADLQ6NUI6 762 aa10□□□□□ -0.81
NUMB-224ENST00000556989 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
NUMB-224ENST00000556989 CEP162Q5TB80 1403 aa9.98□□□□□ -0.81
NUMB-224ENST00000556989 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
NUMB-224ENST00000556989 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.81
NUMB-224ENST00000556989 FHAD1B1AJZ9 1412 aa9.95□□□□□ -0.82
NUMB-224ENST00000556989 CHD1O14646 1710 aa9.95□□□□□ -0.82
NUMB-224ENST00000556989 EVX2Q03828 476 aa9.92□□□□□ -0.82
NUMB-224ENST00000556989 STAG3Q9UJ98 1225 aa9.91□□□□□ -0.82
NUMB-224ENST00000556989 GRIN2AQ12879 1464 aa9.91□□□□□ -0.82
NUMB-224ENST00000556989 SYNJ2O15056 1496 aa9.9□□□□□ -0.82
NUMB-224ENST00000556989 UBTFP17480 764 aaKnown RBP9.9□□□□□ -0.82
NUMB-224ENST00000556989 CEP170Q5SW79 1584 aa9.9□□□□□ -0.83
NUMB-224ENST00000556989 CLIP1P30622 1438 aa9.89□□□□□ -0.83
NUMB-224ENST00000556989 IQGAP2Q13576 1575 aa9.89□□□□□ -0.83
NUMB-224ENST00000556989 SAMD9Q5K651 1589 aa9.89□□□□□ -0.83
NUMB-224ENST00000556989 ARAP1Q96P48 1450 aa9.88□□□□□ -0.83
NUMB-224ENST00000556989 EFCAB5A4FU69 1503 aa9.88□□□□□ -0.83
NUMB-224ENST00000556989 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
NUMB-224ENST00000556989 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
NUMB-224ENST00000556989 FARP1Q9Y4F1 1045 aaPredicted RBP9.85□□□□□ -0.83
NUMB-224ENST00000556989 NUP160Q12769 1436 aa9.84□□□□□ -0.83
NUMB-224ENST00000556989 VPS8Q8N3P4 1428 aa9.83□□□□□ -0.84
NUMB-224ENST00000556989 UGGT2Q9NYU1 1516 aa9.82□□□□□ -0.84
NUMB-224ENST00000556989 KIAA0586Q9BVV6 1533 aa9.81□□□□□ -0.84
NUMB-224ENST00000556989 KIAA0556O60303 1618 aa9.81□□□□□ -0.84
NUMB-224ENST00000556989 PCF11O94913 1555 aaKnown RBP9.81□□□□□ -0.84
NUMB-224ENST00000556989 SHROOM2Q13796 1616 aa9.8□□□□□ -0.84
NUMB-224ENST00000556989 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
NUMB-224ENST00000556989 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
NUMB-224ENST00000556989 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
NUMB-224ENST00000556989 CLASP1Q7Z460 1538 aa9.78□□□□□ -0.84
NUMB-224ENST00000556989 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
NUMB-224ENST00000556989 FKBP8Q14318 412 aa9.77□□□□□ -0.85
NUMB-224ENST00000556989 FHOD3Q2V2M9 1422 aa9.77□□□□□ -0.85
NUMB-224ENST00000556989 DISP1Q96F81 1524 aa9.77□□□□□ -0.85
NUMB-224ENST00000556989 PROM2Q8N271 834 aa9.76□□□□□ -0.85
NUMB-224ENST00000556989 RANGAP1P46060 587 aaPredicted RBP9.75□□□□□ -0.85
NUMB-224ENST00000556989 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
NUMB-224ENST00000556989 FYCO1Q9BQS8 1478 aa9.73□□□□□ -0.85
NUMB-224ENST00000556989 TIAM1Q13009 1591 aa9.72□□□□□ -0.85
NUMB-224ENST00000556989 GABBR2O75899 941 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms