RNA–Protein interactions for RNA: ENST00000556989.1

NUMB-224, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-224ENST00000556989 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
NUMB-224ENST00000556989 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
NUMB-224ENST00000556989 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
NUMB-224ENST00000556989 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
NUMB-224ENST00000556989 FOXD1Q16676 465 aa15.06■□□□□ 0
NUMB-224ENST00000556989 PLPPR3Q6T4P5 718 aa14.55□□□□□ -0.08
NUMB-224ENST00000556989 NISCHQ9Y2I1 1504 aa14.37□□□□□ -0.11
NUMB-224ENST00000556989 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
NUMB-224ENST00000556989 ADRA2BP18089 450 aa14.14□□□□□ -0.15
NUMB-224ENST00000556989 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
NUMB-224ENST00000556989 MSH5O43196 834 aa14.07□□□□□ -0.16
NUMB-224ENST00000556989 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
NUMB-224ENST00000556989 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.34
NUMB-224ENST00000556989 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
NUMB-224ENST00000556989 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
NUMB-224ENST00000556989 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
NUMB-224ENST00000556989 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
NUMB-224ENST00000556989 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
NUMB-224ENST00000556989 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
NUMB-224ENST00000556989 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
NUMB-224ENST00000556989 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
NUMB-224ENST00000556989 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
NUMB-224ENST00000556989 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
NUMB-224ENST00000556989 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
NUMB-224ENST00000556989 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
NUMB-224ENST00000556989 KCNA4P22459 653 aa12.01□□□□□ -0.49
NUMB-224ENST00000556989 RNF39Q9H2S5 420 aa12□□□□□ -0.49
NUMB-224ENST00000556989 DCAF1Q9Y4B6 1507 aa11.93□□□□□ -0.5
NUMB-224ENST00000556989 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
NUMB-224ENST00000556989 ABCC9O60706 1549 aa11.92□□□□□ -0.5
NUMB-224ENST00000556989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.514e-8■□□□□ 8.6
NUMB-224ENST00000556989 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
NUMB-224ENST00000556989 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
NUMB-224ENST00000556989 NACADO15069 1562 aa11.75□□□□□ -0.53
NUMB-224ENST00000556989 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
NUMB-224ENST00000556989 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
NUMB-224ENST00000556989 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
NUMB-224ENST00000556989 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
NUMB-224ENST00000556989 SCRIBQ14160 1630 aa11.59□□□□□ -0.55
NUMB-224ENST00000556989 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
NUMB-224ENST00000556989 SHROOM4Q9ULL8 1493 aa11.54□□□□□ -0.56
NUMB-224ENST00000556989 CAPN15O75808 1086 aa11.42□□□□□ -0.58
NUMB-224ENST00000556989 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
NUMB-224ENST00000556989 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
NUMB-224ENST00000556989 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
NUMB-224ENST00000556989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
NUMB-224ENST00000556989 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
NUMB-224ENST00000556989 APLP2Q06481 763 aa11.32□□□□□ -0.6
NUMB-224ENST00000556989 DSG3P32926 999 aa11.27□□□□□ -0.6
NUMB-224ENST00000556989 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
NUMB-224ENST00000556989 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
NUMB-224ENST00000556989 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
NUMB-224ENST00000556989 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
NUMB-224ENST00000556989 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
NUMB-224ENST00000556989 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
NUMB-224ENST00000556989 ABCB7O75027 752 aa11.16□□□□□ -0.62
NUMB-224ENST00000556989 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
NUMB-224ENST00000556989 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
NUMB-224ENST00000556989 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
NUMB-224ENST00000556989 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
NUMB-224ENST00000556989 MROH2BQ7Z745 1585 aa11.1□□□□□ -0.63
NUMB-224ENST00000556989 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
NUMB-224ENST00000556989 WIZO95785 1651 aa11.05□□□□□ -0.64
NUMB-224ENST00000556989 ZBTB22O15209 634 aa11.02□□□□□ -0.64
NUMB-224ENST00000556989 PEG3Q9GZU2 1588 aa11.01□□□□□ -0.65
NUMB-224ENST00000556989 EIF4G1Q04637 1599 aaKnown RBP11□□□□□ -0.65
NUMB-224ENST00000556989 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
NUMB-224ENST00000556989 POLA2Q14181 598 aa10.96□□□□□ -0.65
NUMB-224ENST00000556989 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
NUMB-224ENST00000556989 TOP2AP11388 1531 aaKnown RBP10.93□□□□□ -0.66
NUMB-224ENST00000556989 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
NUMB-224ENST00000556989 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
NUMB-224ENST00000556989 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
NUMB-224ENST00000556989 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
NUMB-224ENST00000556989 CC2D2AQ9P2K1 1620 aa10.86□□□□□ -0.67
NUMB-224ENST00000556989 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
NUMB-224ENST00000556989 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
NUMB-224ENST00000556989 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
NUMB-224ENST00000556989 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
NUMB-224ENST00000556989 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
NUMB-224ENST00000556989 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
NUMB-224ENST00000556989 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
NUMB-224ENST00000556989 POTEHQ6S545 545 aa10.64□□□□□ -0.71
NUMB-224ENST00000556989 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
NUMB-224ENST00000556989 FBLN2P98095 1184 aa10.55□□□□□ -0.72
NUMB-224ENST00000556989 AKT1S1Q96B36 256 aa10.55□□□□□ -0.72
NUMB-224ENST00000556989 CFTRP13569 1480 aa10.55□□□□□ -0.72
NUMB-224ENST00000556989 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
NUMB-224ENST00000556989 LAMC3Q9Y6N6 1575 aa10.51□□□□□ -0.73
NUMB-224ENST00000556989 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
NUMB-224ENST00000556989 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
NUMB-224ENST00000556989 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
NUMB-224ENST00000556989 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
NUMB-224ENST00000556989 NESP48681 1621 aa10.46□□□□□ -0.73
NUMB-224ENST00000556989 KIF21AQ7Z4S6 1674 aa10.46□□□□□ -0.73
NUMB-224ENST00000556989 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
NUMB-224ENST00000556989 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
NUMB-224ENST00000556989 TOP2BQ02880 1626 aa10.44□□□□□ -0.74
NUMB-224ENST00000556989 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
NUMB-224ENST00000556989 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms