RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
LRP1-212ENST00000556830 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
LRP1-212ENST00000556830 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
LRP1-212ENST00000556830 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
LRP1-212ENST00000556830 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
LRP1-212ENST00000556830 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
LRP1-212ENST00000556830 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
LRP1-212ENST00000556830 NEFLP07196 543 aa18.17■□□□□ 0.5
LRP1-212ENST00000556830 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
LRP1-212ENST00000556830 IGF1RP08069 1367 aa18.16■□□□□ 0.5
LRP1-212ENST00000556830 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
LRP1-212ENST00000556830 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
LRP1-212ENST00000556830 FKBP8Q14318 412 aa18.12■□□□□ 0.49
LRP1-212ENST00000556830 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
LRP1-212ENST00000556830 ARAP1Q96P48 1450 aa18.1■□□□□ 0.49
LRP1-212ENST00000556830 FANCIQ9NVI1 1328 aa18.1■□□□□ 0.49
LRP1-212ENST00000556830 CUL7Q14999 1698 aa18.1■□□□□ 0.49
LRP1-212ENST00000556830 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
LRP1-212ENST00000556830 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
LRP1-212ENST00000556830 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
LRP1-212ENST00000556830 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
LRP1-212ENST00000556830 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
LRP1-212ENST00000556830 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
LRP1-212ENST00000556830 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
LRP1-212ENST00000556830 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
LRP1-212ENST00000556830 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
LRP1-212ENST00000556830 BCANQ96GW7 911 aa18■□□□□ 0.47
LRP1-212ENST00000556830 WDR62O43379 1518 aa18■□□□□ 0.47
LRP1-212ENST00000556830 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
LRP1-212ENST00000556830 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
LRP1-212ENST00000556830 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
LRP1-212ENST00000556830 MAPKBP1O60336 1514 aa17.96■□□□□ 0.46
LRP1-212ENST00000556830 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
LRP1-212ENST00000556830 KCNH8Q96L42 1107 aa17.94■□□□□ 0.46
LRP1-212ENST00000556830 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
LRP1-212ENST00000556830 MSH5O43196 834 aa17.91■□□□□ 0.46
LRP1-212ENST00000556830 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
LRP1-212ENST00000556830 MAP3K1Q13233 1512 aa17.91■□□□□ 0.46
LRP1-212ENST00000556830 CDK11AQ9UQ88 783 aaPredicted RBP17.89■□□□□ 0.45
LRP1-212ENST00000556830 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
LRP1-212ENST00000556830 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
LRP1-212ENST00000556830 ANP32CO43423 234 aa17.87■□□□□ 0.45
LRP1-212ENST00000556830 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.453e-8■■■■■ 35.8
LRP1-212ENST00000556830 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
LRP1-212ENST00000556830 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
LRP1-212ENST00000556830 IFT140Q96RY7 1462 aa17.85■□□□□ 0.45
LRP1-212ENST00000556830 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
LRP1-212ENST00000556830 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
LRP1-212ENST00000556830 DDX10Q13206 875 aaKnown RBP17.84■□□□□ 0.45
LRP1-212ENST00000556830 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.45
LRP1-212ENST00000556830 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
LRP1-212ENST00000556830 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
LRP1-212ENST00000556830 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
LRP1-212ENST00000556830 CFAP43Q8NDM7 1665 aa17.78■□□□□ 0.44
LRP1-212ENST00000556830 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
LRP1-212ENST00000556830 TIAM1Q13009 1591 aa17.77■□□□□ 0.44
LRP1-212ENST00000556830 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
LRP1-212ENST00000556830 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
LRP1-212ENST00000556830 ITGAEP38570 1179 aa17.75■□□□□ 0.43
LRP1-212ENST00000556830 PRKCSHP14314 528 aaPredicted RBP17.73■□□□□ 0.43
LRP1-212ENST00000556830 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
LRP1-212ENST00000556830 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
LRP1-212ENST00000556830 LRRIQ1Q96JM4 1722 aa17.71■□□□□ 0.43
LRP1-212ENST00000556830 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
LRP1-212ENST00000556830 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
LRP1-212ENST00000556830 DEKP35659 375 aaKnown RBP17.69■□□□□ 0.42
LRP1-212ENST00000556830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.69■□□□□ 0.42
LRP1-212ENST00000556830 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
LRP1-212ENST00000556830 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
LRP1-212ENST00000556830 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
LRP1-212ENST00000556830 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
LRP1-212ENST00000556830 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
LRP1-212ENST00000556830 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
LRP1-212ENST00000556830 FMN1Q68DA7 1419 aa17.6■□□□□ 0.41
LRP1-212ENST00000556830 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
LRP1-212ENST00000556830 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.41
LRP1-212ENST00000556830 CEP170Q5SW79 1584 aa17.58■□□□□ 0.4
LRP1-212ENST00000556830 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
LRP1-212ENST00000556830 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
LRP1-212ENST00000556830 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
LRP1-212ENST00000556830 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
LRP1-212ENST00000556830 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
LRP1-212ENST00000556830 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
LRP1-212ENST00000556830 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
LRP1-212ENST00000556830 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
LRP1-212ENST00000556830 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
LRP1-212ENST00000556830 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
LRP1-212ENST00000556830 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
LRP1-212ENST00000556830 CHD1O14646 1710 aa17.47■□□□□ 0.39
LRP1-212ENST00000556830 UACAQ9BZF9 1416 aa17.47■□□□□ 0.39
LRP1-212ENST00000556830 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.39
LRP1-212ENST00000556830 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
LRP1-212ENST00000556830 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
LRP1-212ENST00000556830 NUP160Q12769 1436 aa17.44■□□□□ 0.38
LRP1-212ENST00000556830 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
LRP1-212ENST00000556830 FAM50AQ14320 339 aaKnown RBP17.44■□□□□ 0.38
LRP1-212ENST00000556830 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
LRP1-212ENST00000556830 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
LRP1-212ENST00000556830 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
LRP1-212ENST00000556830 FBLN2P98095 1184 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms