RNA–Protein interactions for RNA: ENST00000555642.1

AL355922.4-201, humanhuman

TSL 3 BASIC

Gene AL355922.4, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355922.4-201ENST00000555642 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
AL355922.4-201ENST00000555642 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
AL355922.4-201ENST00000555642 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
AL355922.4-201ENST00000555642 SOGA1O94964 1423 aa12.65□□□□□ -0.38
AL355922.4-201ENST00000555642 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
AL355922.4-201ENST00000555642 HRCP23327 699 aa12.63□□□□□ -0.39
AL355922.4-201ENST00000555642 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
AL355922.4-201ENST00000555642 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
AL355922.4-201ENST00000555642 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
AL355922.4-201ENST00000555642 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
AL355922.4-201ENST00000555642 NESP48681 1621 aa12.6□□□□□ -0.39
AL355922.4-201ENST00000555642 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
AL355922.4-201ENST00000555642 CUL7Q14999 1698 aa12.6□□□□□ -0.39
AL355922.4-201ENST00000555642 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
AL355922.4-201ENST00000555642 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
AL355922.4-201ENST00000555642 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
AL355922.4-201ENST00000555642 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
AL355922.4-201ENST00000555642 CUX2O14529 1486 aa12.56□□□□□ -0.4
AL355922.4-201ENST00000555642 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
AL355922.4-201ENST00000555642 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
AL355922.4-201ENST00000555642 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
AL355922.4-201ENST00000555642 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
AL355922.4-201ENST00000555642 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
AL355922.4-201ENST00000555642 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
AL355922.4-201ENST00000555642 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
AL355922.4-201ENST00000555642 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
AL355922.4-201ENST00000555642 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.41
AL355922.4-201ENST00000555642 WDR62O43379 1518 aa12.49□□□□□ -0.41
AL355922.4-201ENST00000555642 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
AL355922.4-201ENST00000555642 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
AL355922.4-201ENST00000555642 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
AL355922.4-201ENST00000555642 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
AL355922.4-201ENST00000555642 IFT140Q96RY7 1462 aa12.45□□□□□ -0.42
AL355922.4-201ENST00000555642 CLIP1P30622 1438 aa12.45□□□□□ -0.42
AL355922.4-201ENST00000555642 EVX2Q03828 476 aa12.43□□□□□ -0.42
AL355922.4-201ENST00000555642 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
AL355922.4-201ENST00000555642 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
AL355922.4-201ENST00000555642 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
AL355922.4-201ENST00000555642 GAPVD1Q14C86 1478 aa12.42□□□□□ -0.42
AL355922.4-201ENST00000555642 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
AL355922.4-201ENST00000555642 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
AL355922.4-201ENST00000555642 IGF1RP08069 1367 aa12.4□□□□□ -0.42
AL355922.4-201ENST00000555642 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.43
AL355922.4-201ENST00000555642 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
AL355922.4-201ENST00000555642 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
AL355922.4-201ENST00000555642 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
AL355922.4-201ENST00000555642 ZEB1P37275 1124 aaPredicted RBP12.37□□□□□ -0.43
AL355922.4-201ENST00000555642 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
AL355922.4-201ENST00000555642 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
AL355922.4-201ENST00000555642 FHAD1B1AJZ9 1412 aa12.32□□□□□ -0.44
AL355922.4-201ENST00000555642 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
AL355922.4-201ENST00000555642 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
AL355922.4-201ENST00000555642 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
AL355922.4-201ENST00000555642 TDRD9Q8NDG6 1382 aaKnown RBP12.28□□□□□ -0.44
AL355922.4-201ENST00000555642 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
AL355922.4-201ENST00000555642 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
AL355922.4-201ENST00000555642 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
AL355922.4-201ENST00000555642 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
AL355922.4-201ENST00000555642 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
AL355922.4-201ENST00000555642 IQGAP2Q13576 1575 aa12.23□□□□□ -0.45
AL355922.4-201ENST00000555642 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
AL355922.4-201ENST00000555642 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
AL355922.4-201ENST00000555642 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
AL355922.4-201ENST00000555642 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
AL355922.4-201ENST00000555642 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
AL355922.4-201ENST00000555642 SAMD9Q5K651 1589 aa12.21□□□□□ -0.46
AL355922.4-201ENST00000555642 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.46
AL355922.4-201ENST00000555642 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
AL355922.4-201ENST00000555642 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
AL355922.4-201ENST00000555642 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
AL355922.4-201ENST00000555642 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
AL355922.4-201ENST00000555642 LHX8Q68G74 356 aa12.18□□□□□ -0.46
AL355922.4-201ENST00000555642 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
AL355922.4-201ENST00000555642 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
AL355922.4-201ENST00000555642 GRIN2AQ12879 1464 aa12.16□□□□□ -0.46
AL355922.4-201ENST00000555642 RANGAP1P46060 587 aaPredicted RBP12.16□□□□□ -0.46
AL355922.4-201ENST00000555642 FBLN2P98095 1184 aa12.16□□□□□ -0.46
AL355922.4-201ENST00000555642 GABBR2O75899 941 aa12.15□□□□□ -0.46
AL355922.4-201ENST00000555642 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
AL355922.4-201ENST00000555642 ZNF608Q9ULD9 1512 aaPredicted RBP12.15□□□□□ -0.46
AL355922.4-201ENST00000555642 TIAM1Q13009 1591 aa12.14□□□□□ -0.47
AL355922.4-201ENST00000555642 UGGT2Q9NYU1 1516 aa12.13□□□□□ -0.47
AL355922.4-201ENST00000555642 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
AL355922.4-201ENST00000555642 CCDC18Q5T9S5 1454 aa12.13□□□□□ -0.47
AL355922.4-201ENST00000555642 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
AL355922.4-201ENST00000555642 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
AL355922.4-201ENST00000555642 PCF11O94913 1555 aaKnown RBP12.12□□□□□ -0.47
AL355922.4-201ENST00000555642 CARMIL2Q6F5E8 1435 aa12.1□□□□□ -0.47
AL355922.4-201ENST00000555642 FHOD3Q2V2M9 1422 aa12.07□□□□□ -0.48
AL355922.4-201ENST00000555642 KIAA0556O60303 1618 aa12.07□□□□□ -0.48
AL355922.4-201ENST00000555642 CHD1O14646 1710 aa12.06□□□□□ -0.48
AL355922.4-201ENST00000555642 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
AL355922.4-201ENST00000555642 NUP160Q12769 1436 aa12.04□□□□□ -0.48
AL355922.4-201ENST00000555642 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
AL355922.4-201ENST00000555642 LRRC9Q6ZRR7 1453 aa12.03□□□□□ -0.48
AL355922.4-201ENST00000555642 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
AL355922.4-201ENST00000555642 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
AL355922.4-201ENST00000555642 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
AL355922.4-201ENST00000555642 CEP170Q5SW79 1584 aa12.03□□□□□ -0.48
AL355922.4-201ENST00000555642 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms