RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
GPHN-208ENST00000555503 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
GPHN-208ENST00000555503 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
GPHN-208ENST00000555503 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
GPHN-208ENST00000555503 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPHN-208ENST00000555503 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
GPHN-208ENST00000555503 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
GPHN-208ENST00000555503 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
GPHN-208ENST00000555503 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
GPHN-208ENST00000555503 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
GPHN-208ENST00000555503 PROM2Q8N271 834 aa12.75□□□□□ -0.37
GPHN-208ENST00000555503 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
GPHN-208ENST00000555503 FBLN2P98095 1184 aa12.73□□□□□ -0.37
GPHN-208ENST00000555503 CUX1P39880 1505 aa12.72□□□□□ -0.37
GPHN-208ENST00000555503 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
GPHN-208ENST00000555503 ARAP1Q96P48 1450 aa12.71□□□□□ -0.38
GPHN-208ENST00000555503 APLP2Q06481 763 aa12.7□□□□□ -0.38
GPHN-208ENST00000555503 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
GPHN-208ENST00000555503 SOGA1O94964 1423 aa12.7□□□□□ -0.38
GPHN-208ENST00000555503 TDRD9Q8NDG6 1382 aaKnown RBP12.69□□□□□ -0.38
GPHN-208ENST00000555503 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
GPHN-208ENST00000555503 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
GPHN-208ENST00000555503 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
GPHN-208ENST00000555503 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
GPHN-208ENST00000555503 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
GPHN-208ENST00000555503 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
GPHN-208ENST00000555503 MAGI1Q96QZ7 1491 aaPredicted RBP12.62□□□□□ -0.39
GPHN-208ENST00000555503 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
GPHN-208ENST00000555503 GRIN2BQ13224 1484 aa12.6□□□□□ -0.39
GPHN-208ENST00000555503 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
GPHN-208ENST00000555503 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
GPHN-208ENST00000555503 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
GPHN-208ENST00000555503 BCANQ96GW7 911 aa12.57□□□□□ -0.4
GPHN-208ENST00000555503 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
GPHN-208ENST00000555503 BIVM-ERCC5R4GMW8 1640 aa12.56□□□□□ -0.4
GPHN-208ENST00000555503 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
GPHN-208ENST00000555503 PKD2Q13563 968 aa12.54□□□□□ -0.4
GPHN-208ENST00000555503 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
GPHN-208ENST00000555503 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
GPHN-208ENST00000555503 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.4
GPHN-208ENST00000555503 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
GPHN-208ENST00000555503 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
GPHN-208ENST00000555503 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
GPHN-208ENST00000555503 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
GPHN-208ENST00000555503 KIF13AQ9H1H9 1805 aa12.46□□□□□ -0.41
GPHN-208ENST00000555503 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
GPHN-208ENST00000555503 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
GPHN-208ENST00000555503 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
GPHN-208ENST00000555503 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
GPHN-208ENST00000555503 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
GPHN-208ENST00000555503 NUP160Q12769 1436 aa12.38□□□□□ -0.43
GPHN-208ENST00000555503 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
GPHN-208ENST00000555503 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
GPHN-208ENST00000555503 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
GPHN-208ENST00000555503 POLA2Q14181 598 aa12.34□□□□□ -0.43
GPHN-208ENST00000555503 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
GPHN-208ENST00000555503 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
GPHN-208ENST00000555503 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
GPHN-208ENST00000555503 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
GPHN-208ENST00000555503 PRG4Q92954 1404 aaPredicted RBP12.29□□□□□ -0.44
GPHN-208ENST00000555503 CUL7Q14999 1698 aa12.29□□□□□ -0.44
GPHN-208ENST00000555503 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
GPHN-208ENST00000555503 ADCY10Q96PN6 1610 aa12.29□□□□□ -0.44
GPHN-208ENST00000555503 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
GPHN-208ENST00000555503 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
GPHN-208ENST00000555503 DIP2BQ9P265 1576 aa12.23□□□□□ -0.45
GPHN-208ENST00000555503 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
GPHN-208ENST00000555503 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
GPHN-208ENST00000555503 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
GPHN-208ENST00000555503 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
GPHN-208ENST00000555503 TPRNQ4KMQ1 711 aa12.2□□□□□ -0.46
GPHN-208ENST00000555503 MAPKBP1O60336 1514 aa12.19□□□□□ -0.46
GPHN-208ENST00000555503 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
GPHN-208ENST00000555503 KDM6BO15054 1643 aa12.17□□□□□ -0.46
GPHN-208ENST00000555503 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
GPHN-208ENST00000555503 ABCC10Q5T3U5 1492 aa12.16□□□□□ -0.46
GPHN-208ENST00000555503 CAPN15O75808 1086 aa12.16□□□□□ -0.46
GPHN-208ENST00000555503 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
GPHN-208ENST00000555503 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
GPHN-208ENST00000555503 TTBK1Q5TCY1 1321 aaPredicted RBP12.14□□□□□ -0.47
GPHN-208ENST00000555503 IQGAP2Q13576 1575 aa12.14□□□□□ -0.47
GPHN-208ENST00000555503 IGF1RP08069 1367 aa12.14□□□□□ -0.47
GPHN-208ENST00000555503 RGL2O15211 777 aa12.13□□□□□ -0.47
GPHN-208ENST00000555503 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
GPHN-208ENST00000555503 PPRC1Q5VV67 1664 aaKnown RBP12.13□□□□□ -0.47
GPHN-208ENST00000555503 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
GPHN-208ENST00000555503 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
GPHN-208ENST00000555503 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
GPHN-208ENST00000555503 ZCCHC11Q5TAX3 1644 aaKnown RBP12.08□□□□□ -0.48
GPHN-208ENST00000555503 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
GPHN-208ENST00000555503 TSHZ2Q9NRE2 1034 aa12.07□□□□□ -0.48
GPHN-208ENST00000555503 PTPRGP23470 1445 aa12.06□□□□□ -0.48
GPHN-208ENST00000555503 ABCC2Q92887 1545 aa12.06□□□□□ -0.48
GPHN-208ENST00000555503 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
GPHN-208ENST00000555503 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
GPHN-208ENST00000555503 CARMIL2Q6F5E8 1435 aa12.04□□□□□ -0.48
GPHN-208ENST00000555503 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
GPHN-208ENST00000555503 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
GPHN-208ENST00000555503 MAP3K4Q9Y6R4 1608 aa12.03□□□□□ -0.48
GPHN-208ENST00000555503 TNIKQ9UKE5 1360 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms