RNA–Protein interactions for RNA: ENST00000555408.5

CDK2-208, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 2,598 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-208ENST00000555408 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
CDK2-208ENST00000555408 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
CDK2-208ENST00000555408 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
CDK2-208ENST00000555408 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
CDK2-208ENST00000555408 CFTRP13569 1480 aa18.78■□□□□ 0.6
CDK2-208ENST00000555408 TRIM52Q96A61 297 aa18.77■□□□□ 0.59
CDK2-208ENST00000555408 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
CDK2-208ENST00000555408 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
CDK2-208ENST00000555408 LRRC9Q6ZRR7 1453 aa18.73■□□□□ 0.59
CDK2-208ENST00000555408 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
CDK2-208ENST00000555408 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
CDK2-208ENST00000555408 ANP32EQ9BTT0 268 aa18.66■□□□□ 0.58
CDK2-208ENST00000555408 ANP32CO43423 234 aa18.64■□□□□ 0.57
CDK2-208ENST00000555408 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
CDK2-208ENST00000555408 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
CDK2-208ENST00000555408 NEFLP07196 543 aa18.62■□□□□ 0.57
CDK2-208ENST00000555408 MAP3K1Q13233 1512 aa18.6■□□□□ 0.57
CDK2-208ENST00000555408 PCF11O94913 1555 aaKnown RBP18.6■□□□□ 0.57
CDK2-208ENST00000555408 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
CDK2-208ENST00000555408 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
CDK2-208ENST00000555408 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
CDK2-208ENST00000555408 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
CDK2-208ENST00000555408 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
CDK2-208ENST00000555408 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
CDK2-208ENST00000555408 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
CDK2-208ENST00000555408 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
CDK2-208ENST00000555408 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
CDK2-208ENST00000555408 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDK2-208ENST00000555408 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
CDK2-208ENST00000555408 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
CDK2-208ENST00000555408 CCDC18Q5T9S5 1454 aa18.45■□□□□ 0.54
CDK2-208ENST00000555408 FGD6Q6ZV73 1430 aa18.44■□□□□ 0.54
CDK2-208ENST00000555408 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
CDK2-208ENST00000555408 CASKIN1Q8WXD9 1431 aa18.43■□□□□ 0.54
CDK2-208ENST00000555408 FYCO1Q9BQS8 1478 aa18.43■□□□□ 0.54
CDK2-208ENST00000555408 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
CDK2-208ENST00000555408 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
CDK2-208ENST00000555408 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
CDK2-208ENST00000555408 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.531e-19■■■■■ 87.5
CDK2-208ENST00000555408 UACAQ9BZF9 1416 aa18.36■□□□□ 0.53
CDK2-208ENST00000555408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDK2-208ENST00000555408 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
CDK2-208ENST00000555408 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
CDK2-208ENST00000555408 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
CDK2-208ENST00000555408 NAIPQ13075 1403 aa18.34■□□□□ 0.53
CDK2-208ENST00000555408 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
CDK2-208ENST00000555408 MSH5O43196 834 aa18.34■□□□□ 0.53
CDK2-208ENST00000555408 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
CDK2-208ENST00000555408 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
CDK2-208ENST00000555408 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.52
CDK2-208ENST00000555408 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
CDK2-208ENST00000555408 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
CDK2-208ENST00000555408 NESP48681 1621 aa18.32■□□□□ 0.52
CDK2-208ENST00000555408 FOXD1Q16676 465 aa18.32■□□□□ 0.52
CDK2-208ENST00000555408 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
CDK2-208ENST00000555408 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
CDK2-208ENST00000555408 NCOA2Q15596 1464 aa18.3■□□□□ 0.52
CDK2-208ENST00000555408 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
CDK2-208ENST00000555408 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
CDK2-208ENST00000555408 BCL11AQ9H165 835 aa18.28■□□□□ 0.52
CDK2-208ENST00000555408 FAM9BQ8IZU0 186 aa18.28■□□□□ 0.52
CDK2-208ENST00000555408 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
CDK2-208ENST00000555408 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.51
CDK2-208ENST00000555408 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
CDK2-208ENST00000555408 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
CDK2-208ENST00000555408 CTTNBP2Q8WZ74 1663 aa18.25■□□□□ 0.51
CDK2-208ENST00000555408 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
CDK2-208ENST00000555408 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
CDK2-208ENST00000555408 EIF4G2P78344 907 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDK2-208ENST00000555408 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
CDK2-208ENST00000555408 LRRIQ1Q96JM4 1722 aa18.22■□□□□ 0.51
CDK2-208ENST00000555408 L3MBTL2Q969R5 705 aa18.22■□□□□ 0.51
CDK2-208ENST00000555408 CUL7Q14999 1698 aa18.2■□□□□ 0.5
CDK2-208ENST00000555408 MPHOSPH9Q99550 1183 aa18.19■□□□□ 0.5
CDK2-208ENST00000555408 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
CDK2-208ENST00000555408 B4GALNT3Q6L9W6 998 aa18.18■□□□□ 0.5
CDK2-208ENST00000555408 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
CDK2-208ENST00000555408 DENND4BO75064 1496 aaPredicted RBP18.17■□□□□ 0.5
CDK2-208ENST00000555408 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
CDK2-208ENST00000555408 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
CDK2-208ENST00000555408 MAGI3Q5TCQ9 1506 aa18.16■□□□□ 0.5
CDK2-208ENST00000555408 KDM6BO15054 1643 aa18.15■□□□□ 0.5
CDK2-208ENST00000555408 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
CDK2-208ENST00000555408 PRKRIP1Q9H875 184 aaPredicted RBP18.15■□□□□ 0.5
CDK2-208ENST00000555408 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
CDK2-208ENST00000555408 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
CDK2-208ENST00000555408 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
CDK2-208ENST00000555408 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
CDK2-208ENST00000555408 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
CDK2-208ENST00000555408 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
CDK2-208ENST00000555408 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
CDK2-208ENST00000555408 EHBP1L1Q8N3D4 1523 aa18.12■□□□□ 0.49
CDK2-208ENST00000555408 UGGT2Q9NYU1 1516 aa18.11■□□□□ 0.49
CDK2-208ENST00000555408 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
CDK2-208ENST00000555408 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
CDK2-208ENST00000555408 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
CDK2-208ENST00000555408 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
CDK2-208ENST00000555408 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
CDK2-208ENST00000555408 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
CDK2-208ENST00000555408 KIF7Q2M1P5 1343 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms