RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 CUX1P39880 1505 aa11.27□□□□□ -0.61
TGFB3-202ENST00000554980 AQRO60306 1485 aaKnown RBP eCLIP11.27□□□□□ -0.61
TGFB3-202ENST00000554980 TARBP1Q13395 1621 aaKnown RBP11.26□□□□□ -0.61
TGFB3-202ENST00000554980 ABCC8Q09428 1581 aa11.26□□□□□ -0.61
TGFB3-202ENST00000554980 EIF4G3O43432 1585 aaKnown RBP11.23□□□□□ -0.61
TGFB3-202ENST00000554980 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
TGFB3-202ENST00000554980 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
TGFB3-202ENST00000554980 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
TGFB3-202ENST00000554980 SOGA1O94964 1423 aa11.22□□□□□ -0.61
TGFB3-202ENST00000554980 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
TGFB3-202ENST00000554980 SLC4A1APQ9BWU0 796 aaKnown RBP11.21□□□□□ -0.62
TGFB3-202ENST00000554980 NEFLP07196 543 aa11.2□□□□□ -0.62
TGFB3-202ENST00000554980 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
TGFB3-202ENST00000554980 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
TGFB3-202ENST00000554980 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
TGFB3-202ENST00000554980 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
TGFB3-202ENST00000554980 FBLN2P98095 1184 aa11.15□□□□□ -0.62
TGFB3-202ENST00000554980 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
TGFB3-202ENST00000554980 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
TGFB3-202ENST00000554980 SYNJ1O43426 1573 aa11.14□□□□□ -0.63
TGFB3-202ENST00000554980 BRD2P25440 801 aaKnown RBP11.14□□□□□ -0.63
TGFB3-202ENST00000554980 CHD1O14646 1710 aa11.13□□□□□ -0.63
TGFB3-202ENST00000554980 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
TGFB3-202ENST00000554980 WDR97A6NE52 1622 aa11.12□□□□□ -0.63
TGFB3-202ENST00000554980 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
TGFB3-202ENST00000554980 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
TGFB3-202ENST00000554980 CDK11AQ9UQ88 783 aaPredicted RBP11.11□□□□□ -0.63
TGFB3-202ENST00000554980 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
TGFB3-202ENST00000554980 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
TGFB3-202ENST00000554980 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
TGFB3-202ENST00000554980 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
TGFB3-202ENST00000554980 GAPVD1Q14C86 1478 aa11.08□□□□□ -0.64
TGFB3-202ENST00000554980 GRIN2BQ13224 1484 aa11.07□□□□□ -0.64
TGFB3-202ENST00000554980 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
TGFB3-202ENST00000554980 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
TGFB3-202ENST00000554980 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
TGFB3-202ENST00000554980 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
TGFB3-202ENST00000554980 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-202ENST00000554980 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-202ENST00000554980 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
TGFB3-202ENST00000554980 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
TGFB3-202ENST00000554980 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
TGFB3-202ENST00000554980 MAGI1Q96QZ7 1491 aaPredicted RBP11.03□□□□□ -0.64
TGFB3-202ENST00000554980 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
TGFB3-202ENST00000554980 PPP6R1Q9UPN7 881 aa11.02□□□□□ -0.65
TGFB3-202ENST00000554980 FGD1P98174 961 aa11.01□□□□□ -0.65
TGFB3-202ENST00000554980 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
TGFB3-202ENST00000554980 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
TGFB3-202ENST00000554980 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
TGFB3-202ENST00000554980 IGSF3O75054 1194 aa10.99□□□□□ -0.65
TGFB3-202ENST00000554980 CLASP1Q7Z460 1538 aa10.98□□□□□ -0.65
TGFB3-202ENST00000554980 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
TGFB3-202ENST00000554980 ARAP1Q96P48 1450 aa10.96□□□□□ -0.65
TGFB3-202ENST00000554980 ADAMTS12P58397 1594 aa10.95□□□□□ -0.66
TGFB3-202ENST00000554980 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
TGFB3-202ENST00000554980 CEP170Q5SW79 1584 aa10.94□□□□□ -0.66
TGFB3-202ENST00000554980 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
TGFB3-202ENST00000554980 ERCC6L2Q5T890 1561 aa10.93□□□□□ -0.66
TGFB3-202ENST00000554980 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
TGFB3-202ENST00000554980 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
TGFB3-202ENST00000554980 IGF1RP08069 1367 aa10.91□□□□□ -0.66
TGFB3-202ENST00000554980 NUP160Q12769 1436 aa10.9□□□□□ -0.66
TGFB3-202ENST00000554980 RUSC2Q8N2Y8 1516 aa10.88□□□□□ -0.67
TGFB3-202ENST00000554980 ZBTB22O15209 634 aa10.87□□□□□ -0.67
TGFB3-202ENST00000554980 KIF27Q86VH2 1401 aa10.86□□□□□ -0.67
TGFB3-202ENST00000554980 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
TGFB3-202ENST00000554980 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
TGFB3-202ENST00000554980 SHROOM2Q13796 1616 aa10.82□□□□□ -0.68
TGFB3-202ENST00000554980 RSPH4AQ5TD94 716 aa10.82□□□□□ -0.68
TGFB3-202ENST00000554980 CARMIL1Q5VZK9 1371 aa10.81□□□□□ -0.68
TGFB3-202ENST00000554980 PRG4Q92954 1404 aaPredicted RBP10.81□□□□□ -0.68
TGFB3-202ENST00000554980 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
TGFB3-202ENST00000554980 BCCIPQ9P287 314 aaKnown RBP eCLIP10.8□□□□□ -0.68
TGFB3-202ENST00000554980 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
TGFB3-202ENST00000554980 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
TGFB3-202ENST00000554980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.78□□□□□ -0.68
TGFB3-202ENST00000554980 CUL7Q14999 1698 aa10.77□□□□□ -0.68
TGFB3-202ENST00000554980 PUS7Q96PZ0 661 aaKnown RBP10.76□□□□□ -0.69
TGFB3-202ENST00000554980 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
TGFB3-202ENST00000554980 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
TGFB3-202ENST00000554980 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
TGFB3-202ENST00000554980 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
TGFB3-202ENST00000554980 AAMPQ13685 434 aa10.71□□□□□ -0.69
TGFB3-202ENST00000554980 FKBP8Q14318 412 aa10.71□□□□□ -0.69
TGFB3-202ENST00000554980 RAPGEF2Q9Y4G8 1499 aa10.71□□□□□ -0.7
TGFB3-202ENST00000554980 ZNF326Q5BKZ1 582 aaKnown RBP10.71□□□□□ -0.7
TGFB3-202ENST00000554980 POLR3GLQ9BT43 218 aa10.71□□□□□ -0.7
TGFB3-202ENST00000554980 RSPH6AQ9H0K4 717 aa10.71□□□□□ -0.7
TGFB3-202ENST00000554980 ZEB1P37275 1124 aaPredicted RBP10.68□□□□□ -0.7
TGFB3-202ENST00000554980 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
TGFB3-202ENST00000554980 IQGAP2Q13576 1575 aa10.67□□□□□ -0.7
TGFB3-202ENST00000554980 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
TGFB3-202ENST00000554980 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
TGFB3-202ENST00000554980 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
TGFB3-202ENST00000554980 IRX6P78412 446 aaPredicted RBP10.64□□□□□ -0.71
TGFB3-202ENST00000554980 PTPRGP23470 1445 aa10.64□□□□□ -0.71
TGFB3-202ENST00000554980 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
TGFB3-202ENST00000554980 UGGT2Q9NYU1 1516 aa10.61□□□□□ -0.71
TGFB3-202ENST00000554980 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
TGFB3-202ENST00000554980 KIF13AQ9H1H9 1805 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms