RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
TGFB3-202ENST00000554980 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
TGFB3-202ENST00000554980 CCDC180Q9P1Z9 1646 aa13.76□□□□□ -0.21
TGFB3-202ENST00000554980 ABCC9O60706 1549 aa13.75□□□□□ -0.21
TGFB3-202ENST00000554980 MYT1Q01538 1121 aa13.6□□□□□ -0.23
TGFB3-202ENST00000554980 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-202ENST00000554980 TTBK1Q5TCY1 1321 aaPredicted RBP13.49□□□□□ -0.25
TGFB3-202ENST00000554980 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.27
TGFB3-202ENST00000554980 APLP2Q06481 763 aa13.25□□□□□ -0.29
TGFB3-202ENST00000554980 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
TGFB3-202ENST00000554980 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
TGFB3-202ENST00000554980 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
TGFB3-202ENST00000554980 RB1CC1Q8TDY2 1594 aa13.04□□□□□ -0.32
TGFB3-202ENST00000554980 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.32
TGFB3-202ENST00000554980 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
TGFB3-202ENST00000554980 NACADO15069 1562 aa12.99□□□□□ -0.33
TGFB3-202ENST00000554980 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
TGFB3-202ENST00000554980 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
TGFB3-202ENST00000554980 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
TGFB3-202ENST00000554980 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
TGFB3-202ENST00000554980 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
TGFB3-202ENST00000554980 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.35
TGFB3-202ENST00000554980 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.35
TGFB3-202ENST00000554980 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
TGFB3-202ENST00000554980 DCAF1Q9Y4B6 1507 aa12.76□□□□□ -0.37
TGFB3-202ENST00000554980 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
TGFB3-202ENST00000554980 ARXQ96QS3 562 aa12.58□□□□□ -0.4
TGFB3-202ENST00000554980 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
TGFB3-202ENST00000554980 CHIC1Q5VXU3 224 aa12.47□□□□□ -0.41
TGFB3-202ENST00000554980 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
TGFB3-202ENST00000554980 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
TGFB3-202ENST00000554980 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
TGFB3-202ENST00000554980 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
TGFB3-202ENST00000554980 CC2D2AQ9P2K1 1620 aa12.39□□□□□ -0.43
TGFB3-202ENST00000554980 CECR2Q9BXF3 1484 aa12.32□□□□□ -0.44
TGFB3-202ENST00000554980 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
TGFB3-202ENST00000554980 KCNA4P22459 653 aa12.23□□□□□ -0.45
TGFB3-202ENST00000554980 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
TGFB3-202ENST00000554980 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-202ENST00000554980 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
TGFB3-202ENST00000554980 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
TGFB3-202ENST00000554980 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
TGFB3-202ENST00000554980 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
TGFB3-202ENST00000554980 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
TGFB3-202ENST00000554980 BCL11AQ9H165 835 aa12.03□□□□□ -0.48
TGFB3-202ENST00000554980 NCAPD3P42695 1498 aa12.03□□□□□ -0.48
TGFB3-202ENST00000554980 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
TGFB3-202ENST00000554980 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
TGFB3-202ENST00000554980 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
TGFB3-202ENST00000554980 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
TGFB3-202ENST00000554980 SMARCA2P51531 1590 aa11.96□□□□□ -0.5
TGFB3-202ENST00000554980 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
TGFB3-202ENST00000554980 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
TGFB3-202ENST00000554980 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
TGFB3-202ENST00000554980 NESP48681 1621 aa11.89□□□□□ -0.51
TGFB3-202ENST00000554980 WIZO95785 1651 aa11.89□□□□□ -0.51
TGFB3-202ENST00000554980 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
TGFB3-202ENST00000554980 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
TGFB3-202ENST00000554980 BCANQ96GW7 911 aa11.81□□□□□ -0.52
TGFB3-202ENST00000554980 FAM9AQ8IZU1 332 aaPredicted RBP11.79□□□□□ -0.52
TGFB3-202ENST00000554980 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
TGFB3-202ENST00000554980 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
TGFB3-202ENST00000554980 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.54
TGFB3-202ENST00000554980 LAMC3Q9Y6N6 1575 aa11.7□□□□□ -0.54
TGFB3-202ENST00000554980 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
TGFB3-202ENST00000554980 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
TGFB3-202ENST00000554980 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
TGFB3-202ENST00000554980 CUX2O14529 1486 aa11.65□□□□□ -0.54
TGFB3-202ENST00000554980 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
TGFB3-202ENST00000554980 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
TGFB3-202ENST00000554980 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
TGFB3-202ENST00000554980 CFTRP13569 1480 aa11.6□□□□□ -0.55
TGFB3-202ENST00000554980 C14orf37Q86TY3 774 aa11.58□□□□□ -0.56
TGFB3-202ENST00000554980 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
TGFB3-202ENST00000554980 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
TGFB3-202ENST00000554980 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
TGFB3-202ENST00000554980 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
TGFB3-202ENST00000554980 DNAJC5Q9H3Z4 198 aa11.53□□□□□ -0.56
TGFB3-202ENST00000554980 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
TGFB3-202ENST00000554980 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
TGFB3-202ENST00000554980 WDR62O43379 1518 aa11.51□□□□□ -0.57
TGFB3-202ENST00000554980 PDIA4P13667 645 aaKnown RBP11.51□□□□□ -0.57
TGFB3-202ENST00000554980 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
TGFB3-202ENST00000554980 UBE2Q2Q8WVN8 375 aa11.49□□□□□ -0.57
TGFB3-202ENST00000554980 TMEM132AQ24JP5 1023 aa11.46□□□□□ -0.58
TGFB3-202ENST00000554980 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
TGFB3-202ENST00000554980 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
TGFB3-202ENST00000554980 AEBP2Q6ZN18 517 aaPredicted RBP11.4□□□□□ -0.58
TGFB3-202ENST00000554980 TRIM26Q12899 539 aaPredicted RBP11.4□□□□□ -0.58
TGFB3-202ENST00000554980 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-202ENST00000554980 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
TGFB3-202ENST00000554980 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
TGFB3-202ENST00000554980 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
TGFB3-202ENST00000554980 HRCP23327 699 aa11.33□□□□□ -0.6
TGFB3-202ENST00000554980 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
TGFB3-202ENST00000554980 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
TGFB3-202ENST00000554980 PDE4CQ08493 712 aa11.3□□□□□ -0.6
TGFB3-202ENST00000554980 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
TGFB3-202ENST00000554980 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
TGFB3-202ENST00000554980 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms