RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
PSMC1-204ENST00000554624 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
PSMC1-204ENST00000554624 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
PSMC1-204ENST00000554624 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
PSMC1-204ENST00000554624 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
PSMC1-204ENST00000554624 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
PSMC1-204ENST00000554624 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
PSMC1-204ENST00000554624 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
PSMC1-204ENST00000554624 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
PSMC1-204ENST00000554624 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
PSMC1-204ENST00000554624 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
PSMC1-204ENST00000554624 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
PSMC1-204ENST00000554624 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
PSMC1-204ENST00000554624 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
PSMC1-204ENST00000554624 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
PSMC1-204ENST00000554624 CUX1P39880 1505 aa17.86■□□□□ 0.45
PSMC1-204ENST00000554624 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
PSMC1-204ENST00000554624 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.45
PSMC1-204ENST00000554624 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
PSMC1-204ENST00000554624 POLA2Q14181 598 aa17.83■□□□□ 0.44
PSMC1-204ENST00000554624 CHD1O14646 1710 aa17.81■□□□□ 0.44
PSMC1-204ENST00000554624 DSG3P32926 999 aa17.8■□□□□ 0.44
PSMC1-204ENST00000554624 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
PSMC1-204ENST00000554624 SYNJ2O15056 1496 aa17.78■□□□□ 0.44
PSMC1-204ENST00000554624 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
PSMC1-204ENST00000554624 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
PSMC1-204ENST00000554624 ABCB7O75027 752 aa17.74■□□□□ 0.43
PSMC1-204ENST00000554624 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
PSMC1-204ENST00000554624 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
PSMC1-204ENST00000554624 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
PSMC1-204ENST00000554624 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
PSMC1-204ENST00000554624 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
PSMC1-204ENST00000554624 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
PSMC1-204ENST00000554624 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
PSMC1-204ENST00000554624 PBRM1Q86U86 1689 aa17.56■□□□□ 0.4
PSMC1-204ENST00000554624 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
PSMC1-204ENST00000554624 NUP160Q12769 1436 aa17.54■□□□□ 0.4
PSMC1-204ENST00000554624 MKRN4PQ13434 485 aaPredicted RBP17.53■□□□□ 0.4
PSMC1-204ENST00000554624 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
PSMC1-204ENST00000554624 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
PSMC1-204ENST00000554624 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
PSMC1-204ENST00000554624 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
PSMC1-204ENST00000554624 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
PSMC1-204ENST00000554624 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
PSMC1-204ENST00000554624 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
PSMC1-204ENST00000554624 FKBP8Q14318 412 aa17.4■□□□□ 0.38
PSMC1-204ENST00000554624 NPM1P06748 294 aaKnown RBP eCLIP17.39■□□□□ 0.37
PSMC1-204ENST00000554624 IGF1RP08069 1367 aa17.37■□□□□ 0.37
PSMC1-204ENST00000554624 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
PSMC1-204ENST00000554624 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
PSMC1-204ENST00000554624 KIAA0586Q9BVV6 1533 aa17.28■□□□□ 0.36
PSMC1-204ENST00000554624 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
PSMC1-204ENST00000554624 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
PSMC1-204ENST00000554624 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
PSMC1-204ENST00000554624 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.34
PSMC1-204ENST00000554624 PTPRGP23470 1445 aa17.19■□□□□ 0.34
PSMC1-204ENST00000554624 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
PSMC1-204ENST00000554624 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
PSMC1-204ENST00000554624 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
PSMC1-204ENST00000554624 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
PSMC1-204ENST00000554624 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
PSMC1-204ENST00000554624 CUL7Q14999 1698 aa17.16■□□□□ 0.34
PSMC1-204ENST00000554624 MAPKBP1O60336 1514 aa17.15■□□□□ 0.34
PSMC1-204ENST00000554624 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
PSMC1-204ENST00000554624 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
PSMC1-204ENST00000554624 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
PSMC1-204ENST00000554624 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
PSMC1-204ENST00000554624 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
PSMC1-204ENST00000554624 PROM2Q8N271 834 aa17.06■□□□□ 0.32
PSMC1-204ENST00000554624 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
PSMC1-204ENST00000554624 SSUH2Q9Y2M2 353 aa17.04■□□□□ 0.32
PSMC1-204ENST00000554624 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
PSMC1-204ENST00000554624 DIP2BQ9P265 1576 aa17.02■□□□□ 0.32
PSMC1-204ENST00000554624 ABCC2Q92887 1545 aa17.02■□□□□ 0.32
PSMC1-204ENST00000554624 PLB1Q6P1J6 1458 aa17.01■□□□□ 0.31
PSMC1-204ENST00000554624 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
PSMC1-204ENST00000554624 IQGAP2Q13576 1575 aa17.01■□□□□ 0.31
PSMC1-204ENST00000554624 UHRF1BP1LA0JNW5 1464 aa17■□□□□ 0.31
PSMC1-204ENST00000554624 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
PSMC1-204ENST00000554624 DISP1Q96F81 1524 aa16.96■□□□□ 0.31
PSMC1-204ENST00000554624 FAM9AQ8IZU1 332 aaPredicted RBP16.95■□□□□ 0.3
PSMC1-204ENST00000554624 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
PSMC1-204ENST00000554624 KDM4FA0A1W2PPD8 638 aa16.93■□□□□ 0.3
PSMC1-204ENST00000554624 KDM6BO15054 1643 aa16.92■□□□□ 0.3
PSMC1-204ENST00000554624 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
PSMC1-204ENST00000554624 GLI2P10070 1586 aa16.9■□□□□ 0.3
PSMC1-204ENST00000554624 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
PSMC1-204ENST00000554624 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
PSMC1-204ENST00000554624 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
PSMC1-204ENST00000554624 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
PSMC1-204ENST00000554624 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
PSMC1-204ENST00000554624 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
PSMC1-204ENST00000554624 PRXQ9BXM0 1461 aa16.82■□□□□ 0.28
PSMC1-204ENST00000554624 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
PSMC1-204ENST00000554624 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
PSMC1-204ENST00000554624 WDR7Q9Y4E6 1490 aa16.79■□□□□ 0.28
PSMC1-204ENST00000554624 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
PSMC1-204ENST00000554624 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
PSMC1-204ENST00000554624 ZCCHC11Q5TAX3 1644 aaKnown RBP16.75■□□□□ 0.27
PSMC1-204ENST00000554624 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms