RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
PSMC1-204ENST00000554624 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
PSMC1-204ENST00000554624 PHF23Q9BUL5 403 aaPredicted RBP25.96■■□□□ 1.75
PSMC1-204ENST00000554624 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
PSMC1-204ENST00000554624 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
PSMC1-204ENST00000554624 PLPPR3Q6T4P5 718 aa24.14■■□□□ 1.45
PSMC1-204ENST00000554624 FOXD1Q16676 465 aa23.62■■□□□ 1.37
PSMC1-204ENST00000554624 PPP6R1Q9UPN7 881 aa22.82■■□□□ 1.24
PSMC1-204ENST00000554624 ADRA2BP18089 450 aa22.8■■□□□ 1.24
PSMC1-204ENST00000554624 PIAS4Q8N2W9 510 aaPredicted RBP22.33■■□□□ 1.17
PSMC1-204ENST00000554624 ABCC9O60706 1549 aa22.23■■□□□ 1.15
PSMC1-204ENST00000554624 CCDC180Q9P1Z9 1646 aa22.09■■□□□ 1.13
PSMC1-204ENST00000554624 MSH5O43196 834 aa21.82■■□□□ 1.08
PSMC1-204ENST00000554624 PPP4R3CPQ6ZMV5 832 aa21.23■□□□□ 0.99
PSMC1-204ENST00000554624 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
PSMC1-204ENST00000554624 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
PSMC1-204ENST00000554624 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
PSMC1-204ENST00000554624 NACADO15069 1562 aa21.02■□□□□ 0.95
PSMC1-204ENST00000554624 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
PSMC1-204ENST00000554624 KCNA4P22459 653 aa20.88■□□□□ 0.93
PSMC1-204ENST00000554624 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
PSMC1-204ENST00000554624 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
PSMC1-204ENST00000554624 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
PSMC1-204ENST00000554624 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
PSMC1-204ENST00000554624 MAPK8IP2Q13387 824 aaPredicted RBP20.61■□□□□ 0.89
PSMC1-204ENST00000554624 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
PSMC1-204ENST00000554624 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
PSMC1-204ENST00000554624 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
PSMC1-204ENST00000554624 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
PSMC1-204ENST00000554624 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
PSMC1-204ENST00000554624 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
PSMC1-204ENST00000554624 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
PSMC1-204ENST00000554624 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
PSMC1-204ENST00000554624 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
PSMC1-204ENST00000554624 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
PSMC1-204ENST00000554624 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
PSMC1-204ENST00000554624 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
PSMC1-204ENST00000554624 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
PSMC1-204ENST00000554624 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
PSMC1-204ENST00000554624 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
PSMC1-204ENST00000554624 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
PSMC1-204ENST00000554624 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
PSMC1-204ENST00000554624 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
PSMC1-204ENST00000554624 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
PSMC1-204ENST00000554624 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
PSMC1-204ENST00000554624 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
PSMC1-204ENST00000554624 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.68
PSMC1-204ENST00000554624 FOXD4L1Q9NU39 408 aa19.25■□□□□ 0.67
PSMC1-204ENST00000554624 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
PSMC1-204ENST00000554624 CUX2O14529 1486 aa19.22■□□□□ 0.67
PSMC1-204ENST00000554624 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
PSMC1-204ENST00000554624 SLC4A2P04920 1241 aa19.21■□□□□ 0.67
PSMC1-204ENST00000554624 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
PSMC1-204ENST00000554624 ZBTB22O15209 634 aa19.2■□□□□ 0.66
PSMC1-204ENST00000554624 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
PSMC1-204ENST00000554624 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
PSMC1-204ENST00000554624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
PSMC1-204ENST00000554624 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
PSMC1-204ENST00000554624 NESP48681 1621 aa19.05■□□□□ 0.64
PSMC1-204ENST00000554624 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
PSMC1-204ENST00000554624 PDS5BQ9NTI5 1447 aa18.96■□□□□ 0.63
PSMC1-204ENST00000554624 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
PSMC1-204ENST00000554624 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
PSMC1-204ENST00000554624 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
PSMC1-204ENST00000554624 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
PSMC1-204ENST00000554624 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
PSMC1-204ENST00000554624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
PSMC1-204ENST00000554624 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
PSMC1-204ENST00000554624 WIZO95785 1651 aa18.71■□□□□ 0.59
PSMC1-204ENST00000554624 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
PSMC1-204ENST00000554624 RSF1Q96T23 1441 aaPredicted RBP18.68■□□□□ 0.58
PSMC1-204ENST00000554624 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
PSMC1-204ENST00000554624 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
PSMC1-204ENST00000554624 ATXN8OSP0DMR3 200 aa18.65■□□□□ 0.58
PSMC1-204ENST00000554624 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
PSMC1-204ENST00000554624 CFTRP13569 1480 aa18.62■□□□□ 0.57
PSMC1-204ENST00000554624 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
PSMC1-204ENST00000554624 WDR62O43379 1518 aa18.6■□□□□ 0.57
PSMC1-204ENST00000554624 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
PSMC1-204ENST00000554624 APLP2Q06481 763 aa18.53■□□□□ 0.56
PSMC1-204ENST00000554624 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
PSMC1-204ENST00000554624 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
PSMC1-204ENST00000554624 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
PSMC1-204ENST00000554624 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
PSMC1-204ENST00000554624 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
PSMC1-204ENST00000554624 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.54
PSMC1-204ENST00000554624 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
PSMC1-204ENST00000554624 ATF5Q9Y2D1 282 aaPredicted RBP18.28■□□□□ 0.52
PSMC1-204ENST00000554624 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
PSMC1-204ENST00000554624 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
PSMC1-204ENST00000554624 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
PSMC1-204ENST00000554624 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
PSMC1-204ENST00000554624 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
PSMC1-204ENST00000554624 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
PSMC1-204ENST00000554624 CAPN15O75808 1086 aa18.12■□□□□ 0.49
PSMC1-204ENST00000554624 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
PSMC1-204ENST00000554624 AQRO60306 1485 aaKnown RBP eCLIP18.08■□□□□ 0.49
PSMC1-204ENST00000554624 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
PSMC1-204ENST00000554624 FBLN2P98095 1184 aa18.06■□□□□ 0.48
PSMC1-204ENST00000554624 SOGA1O94964 1423 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms