RNA–Protein interactions for RNA: ENST00000552532.1

AC089998.4-201, humanhuman

TSL 3 BASIC

Gene AC089998.4, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089998.4-201ENST00000552532 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
AC089998.4-201ENST00000552532 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
AC089998.4-201ENST00000552532 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
AC089998.4-201ENST00000552532 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
AC089998.4-201ENST00000552532 GABBR2O75899 941 aa15.95■□□□□ 0.14
AC089998.4-201ENST00000552532 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
AC089998.4-201ENST00000552532 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
AC089998.4-201ENST00000552532 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
AC089998.4-201ENST00000552532 SPDYE2BA6NHP3 402 aa15.9■□□□□ 0.14
AC089998.4-201ENST00000552532 SPDYE6P0CI01 402 aa15.9■□□□□ 0.14
AC089998.4-201ENST00000552532 SPDYE2Q495Y8 402 aa15.9■□□□□ 0.14
AC089998.4-201ENST00000552532 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
AC089998.4-201ENST00000552532 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
AC089998.4-201ENST00000552532 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
AC089998.4-201ENST00000552532 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
AC089998.4-201ENST00000552532 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
AC089998.4-201ENST00000552532 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
AC089998.4-201ENST00000552532 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
AC089998.4-201ENST00000552532 FBLN2P98095 1184 aa15.77■□□□□ 0.12
AC089998.4-201ENST00000552532 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
AC089998.4-201ENST00000552532 ATXN8OSP0DMR3 200 aa15.73■□□□□ 0.11
AC089998.4-201ENST00000552532 SOGA1O94964 1423 aa15.73■□□□□ 0.11
AC089998.4-201ENST00000552532 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
AC089998.4-201ENST00000552532 CYB5RLQ6IPT4 315 aa15.7■□□□□ 0.1
AC089998.4-201ENST00000552532 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
AC089998.4-201ENST00000552532 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
AC089998.4-201ENST00000552532 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
AC089998.4-201ENST00000552532 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
AC089998.4-201ENST00000552532 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
AC089998.4-201ENST00000552532 EIF4G3O43432 1585 aaKnown RBP15.65■□□□□ 0.1
AC089998.4-201ENST00000552532 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
AC089998.4-201ENST00000552532 RIMBP3CA6NJZ7 1639 aa15.63■□□□□ 0.09
AC089998.4-201ENST00000552532 RIMBP3BA6NNM3 1639 aa15.63■□□□□ 0.09
AC089998.4-201ENST00000552532 RIMBP3Q9UFD9 1639 aa15.63■□□□□ 0.09
AC089998.4-201ENST00000552532 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
AC089998.4-201ENST00000552532 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
AC089998.4-201ENST00000552532 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
AC089998.4-201ENST00000552532 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
AC089998.4-201ENST00000552532 CUX1P39880 1505 aa15.55■□□□□ 0.08
AC089998.4-201ENST00000552532 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
AC089998.4-201ENST00000552532 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
AC089998.4-201ENST00000552532 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
AC089998.4-201ENST00000552532 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
AC089998.4-201ENST00000552532 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
AC089998.4-201ENST00000552532 CHD1O14646 1710 aa15.51■□□□□ 0.07
AC089998.4-201ENST00000552532 GAPVD1Q14C86 1478 aa15.49■□□□□ 0.07
AC089998.4-201ENST00000552532 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
AC089998.4-201ENST00000552532 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
AC089998.4-201ENST00000552532 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
AC089998.4-201ENST00000552532 ZBTB22O15209 634 aa15.46■□□□□ 0.07
AC089998.4-201ENST00000552532 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
AC089998.4-201ENST00000552532 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
AC089998.4-201ENST00000552532 ABCA10Q8WWZ4 1543 aa15.44■□□□□ 0.06
AC089998.4-201ENST00000552532 CLCN6P51797 869 aa15.44■□□□□ 0.06
AC089998.4-201ENST00000552532 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
AC089998.4-201ENST00000552532 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
AC089998.4-201ENST00000552532 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
AC089998.4-201ENST00000552532 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
AC089998.4-201ENST00000552532 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
AC089998.4-201ENST00000552532 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
AC089998.4-201ENST00000552532 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
AC089998.4-201ENST00000552532 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
AC089998.4-201ENST00000552532 POTEMA6NI47 508 aa15.3■□□□□ 0.04
AC089998.4-201ENST00000552532 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
AC089998.4-201ENST00000552532 DCBLD2Q96PD2 775 aa15.28■□□□□ 0.04
AC089998.4-201ENST00000552532 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
AC089998.4-201ENST00000552532 NUP160Q12769 1436 aa15.26■□□□□ 0.03
AC089998.4-201ENST00000552532 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
AC089998.4-201ENST00000552532 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
AC089998.4-201ENST00000552532 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
AC089998.4-201ENST00000552532 POTEGQ6S5H5 508 aa15.23■□□□□ 0.03
AC089998.4-201ENST00000552532 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
AC089998.4-201ENST00000552532 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
AC089998.4-201ENST00000552532 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
AC089998.4-201ENST00000552532 CEP170Q5SW79 1584 aa15.18■□□□□ 0.02
AC089998.4-201ENST00000552532 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
AC089998.4-201ENST00000552532 IGF1RP08069 1367 aa15.15■□□□□ 0.02
AC089998.4-201ENST00000552532 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
AC089998.4-201ENST00000552532 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
AC089998.4-201ENST00000552532 ZNF579Q8NAF0 562 aaKnown RBP15.1■□□□□ 0.01
AC089998.4-201ENST00000552532 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
AC089998.4-201ENST00000552532 POTEB2H3BUK9 544 aa15.08■□□□□ 0
AC089998.4-201ENST00000552532 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
AC089998.4-201ENST00000552532 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
AC089998.4-201ENST00000552532 FAM69CQ0P6D2 419 aa15.06■□□□□ 0
AC089998.4-201ENST00000552532 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
AC089998.4-201ENST00000552532 PTPRGP23470 1445 aa14.99□□□□□ -0.01
AC089998.4-201ENST00000552532 CARMIL2Q6F5E8 1435 aa14.98□□□□□ -0.01
AC089998.4-201ENST00000552532 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
AC089998.4-201ENST00000552532 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
AC089998.4-201ENST00000552532 CUL7Q14999 1698 aa14.97□□□□□ -0.01
AC089998.4-201ENST00000552532 ABCC10Q5T3U5 1492 aa14.95□□□□□ -0.02
AC089998.4-201ENST00000552532 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
AC089998.4-201ENST00000552532 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
AC089998.4-201ENST00000552532 TNIKQ9UKE5 1360 aa14.94□□□□□ -0.02
AC089998.4-201ENST00000552532 MAPKBP1O60336 1514 aa14.91□□□□□ -0.02
AC089998.4-201ENST00000552532 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
AC089998.4-201ENST00000552532 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
AC089998.4-201ENST00000552532 ADCY10Q96PN6 1610 aa14.85□□□□□ -0.03
AC089998.4-201ENST00000552532 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms