RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
HOXB3-213ENST00000552000 WDR62O43379 1518 aa10.62□□□□□ -0.71
HOXB3-213ENST00000552000 ZBTB22O15209 634 aa10.61□□□□□ -0.71
HOXB3-213ENST00000552000 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
HOXB3-213ENST00000552000 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
HOXB3-213ENST00000552000 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
HOXB3-213ENST00000552000 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
HOXB3-213ENST00000552000 FANCD2Q9BXW9 1451 aa10.52□□□□□ -0.73
HOXB3-213ENST00000552000 LHX8Q68G74 356 aa10.51□□□□□ -0.73
HOXB3-213ENST00000552000 RIMBP3CA6NJZ7 1639 aa10.49□□□□□ -0.73
HOXB3-213ENST00000552000 RIMBP3BA6NNM3 1639 aa10.49□□□□□ -0.73
HOXB3-213ENST00000552000 RIMBP3Q9UFD9 1639 aa10.49□□□□□ -0.73
HOXB3-213ENST00000552000 GABBR2O75899 941 aa10.49□□□□□ -0.73
HOXB3-213ENST00000552000 WIZO95785 1651 aa10.49□□□□□ -0.73
HOXB3-213ENST00000552000 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
HOXB3-213ENST00000552000 URB2Q14146 1524 aaKnown RBP10.46□□□□□ -0.74
HOXB3-213ENST00000552000 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
HOXB3-213ENST00000552000 CFTRP13569 1480 aa10.43□□□□□ -0.74
HOXB3-213ENST00000552000 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
HOXB3-213ENST00000552000 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
HOXB3-213ENST00000552000 PRR29P0C7W0 189 aa10.4□□□□□ -0.74
HOXB3-213ENST00000552000 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
HOXB3-213ENST00000552000 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
HOXB3-213ENST00000552000 IFT140Q96RY7 1462 aa10.35□□□□□ -0.75
HOXB3-213ENST00000552000 TOP2AP11388 1531 aaKnown RBP10.32□□□□□ -0.76
HOXB3-213ENST00000552000 ARAP1Q96P48 1450 aa10.31□□□□□ -0.76
HOXB3-213ENST00000552000 PRDM2Q13029 1718 aa10.31□□□□□ -0.76
HOXB3-213ENST00000552000 RSF1Q96T23 1441 aaPredicted RBP10.3□□□□□ -0.76
HOXB3-213ENST00000552000 EIF4G3O43432 1585 aaKnown RBP10.29□□□□□ -0.76
HOXB3-213ENST00000552000 CHD1O14646 1710 aa10.29□□□□□ -0.76
HOXB3-213ENST00000552000 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
HOXB3-213ENST00000552000 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
HOXB3-213ENST00000552000 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
HOXB3-213ENST00000552000 AQRO60306 1485 aaKnown RBP eCLIP10.26□□□□□ -0.773e-8■■■■□ 19.6
HOXB3-213ENST00000552000 PLSCR2Q9NRY7 297 aa10.25□□□□□ -0.77
HOXB3-213ENST00000552000 FARP1Q9Y4F1 1045 aaPredicted RBP10.22□□□□□ -0.77
HOXB3-213ENST00000552000 CCDC88BA6NC98 1476 aa10.22□□□□□ -0.77
HOXB3-213ENST00000552000 ABCC8Q09428 1581 aa10.22□□□□□ -0.77
HOXB3-213ENST00000552000 CLCN6P51797 869 aa10.21□□□□□ -0.77
HOXB3-213ENST00000552000 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
HOXB3-213ENST00000552000 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
HOXB3-213ENST00000552000 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
HOXB3-213ENST00000552000 POLA1P09884 1462 aaPredicted RBP10.16□□□□□ -0.78
HOXB3-213ENST00000552000 TDRD9Q8NDG6 1382 aaKnown RBP10.15□□□□□ -0.78
HOXB3-213ENST00000552000 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
HOXB3-213ENST00000552000 CLASP1Q7Z460 1538 aa10.13□□□□□ -0.79
HOXB3-213ENST00000552000 SNAPC4Q5SXM2 1469 aa10.13□□□□□ -0.79
HOXB3-213ENST00000552000 CHMP7Q8WUX9 453 aaPredicted RBP10.13□□□□□ -0.79
HOXB3-213ENST00000552000 SOGA1O94964 1423 aa10.11□□□□□ -0.79
HOXB3-213ENST00000552000 SYNJ1O43426 1573 aa10.1□□□□□ -0.79
HOXB3-213ENST00000552000 ZRANB1Q9UGI0 708 aa10.08□□□□□ -0.8
HOXB3-213ENST00000552000 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
HOXB3-213ENST00000552000 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
HOXB3-213ENST00000552000 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
HOXB3-213ENST00000552000 FGD5Q6ZNL6 1462 aa10.06□□□□□ -0.8
HOXB3-213ENST00000552000 GRIN2BQ13224 1484 aa10.05□□□□□ -0.8
HOXB3-213ENST00000552000 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
HOXB3-213ENST00000552000 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
HOXB3-213ENST00000552000 STAG3Q9UJ98 1225 aa10.04□□□□□ -0.8
HOXB3-213ENST00000552000 CUX1P39880 1505 aa10.01□□□□□ -0.81
HOXB3-213ENST00000552000 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
HOXB3-213ENST00000552000 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
HOXB3-213ENST00000552000 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
HOXB3-213ENST00000552000 ERCC6L2Q5T890 1561 aa9.98□□□□□ -0.81
HOXB3-213ENST00000552000 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
HOXB3-213ENST00000552000 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
HOXB3-213ENST00000552000 KIF13AQ9H1H9 1805 aa9.95□□□□□ -0.82
HOXB3-213ENST00000552000 POTEB2H3BUK9 544 aa9.94□□□□□ -0.82
HOXB3-213ENST00000552000 CEP170Q5SW79 1584 aa9.93□□□□□ -0.82
HOXB3-213ENST00000552000 GRIN2AQ12879 1464 aa9.92□□□□□ -0.82
HOXB3-213ENST00000552000 POTEMA6NI47 508 aa9.92□□□□□ -0.82
HOXB3-213ENST00000552000 ABCA5Q8WWZ7 1642 aa9.92□□□□□ -0.82
HOXB3-213ENST00000552000 ABCA10Q8WWZ4 1543 aa9.91□□□□□ -0.82
HOXB3-213ENST00000552000 NUP160Q12769 1436 aa9.9□□□□□ -0.83
HOXB3-213ENST00000552000 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
HOXB3-213ENST00000552000 POTEGQ6S5H5 508 aa9.88□□□□□ -0.83
HOXB3-213ENST00000552000 ILDR1Q86SU0 546 aaPredicted RBP9.88□□□□□ -0.83
HOXB3-213ENST00000552000 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
HOXB3-213ENST00000552000 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
HOXB3-213ENST00000552000 SHROOM2Q13796 1616 aa9.87□□□□□ -0.83
HOXB3-213ENST00000552000 FAM69CQ0P6D2 419 aa9.87□□□□□ -0.83
HOXB3-213ENST00000552000 SPDYE4A6NLX3 237 aa9.86□□□□□ -0.83
HOXB3-213ENST00000552000 KDM4FA0A1W2PPD8 638 aa9.85□□□□□ -0.83
HOXB3-213ENST00000552000 FHAD1B1AJZ9 1412 aa9.84□□□□□ -0.83
HOXB3-213ENST00000552000 PRG4Q92954 1404 aaPredicted RBP9.84□□□□□ -0.83
HOXB3-213ENST00000552000 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
HOXB3-213ENST00000552000 ABCC10Q5T3U5 1492 aa9.83□□□□□ -0.84
HOXB3-213ENST00000552000 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
HOXB3-213ENST00000552000 JPH4Q96JJ6 628 aa9.82□□□□□ -0.84
HOXB3-213ENST00000552000 TSPOAP1O95153 1857 aa9.82□□□□□ -0.84
HOXB3-213ENST00000552000 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
HOXB3-213ENST00000552000 DIP2BQ9P265 1576 aa9.8□□□□□ -0.84
HOXB3-213ENST00000552000 KDM6BO15054 1643 aa9.79□□□□□ -0.84
HOXB3-213ENST00000552000 MAPKBP1O60336 1514 aa9.78□□□□□ -0.84
HOXB3-213ENST00000552000 ERICH3Q5RHP9 1530 aa9.77□□□□□ -0.84
HOXB3-213ENST00000552000 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
HOXB3-213ENST00000552000 ADCY10Q96PN6 1610 aa9.76□□□□□ -0.85
HOXB3-213ENST00000552000 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
HOXB3-213ENST00000552000 TOP2BQ02880 1626 aa9.74□□□□□ -0.85
HOXB3-213ENST00000552000 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms