RNA–Protein interactions for RNA: ENST00000551436.1

KRT4-203, Transcript of keratin 4, humanhuman

TSL 2

Gene KRT4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-203ENST00000551436 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
KRT4-203ENST00000551436 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
KRT4-203ENST00000551436 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
KRT4-203ENST00000551436 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
KRT4-203ENST00000551436 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
KRT4-203ENST00000551436 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
KRT4-203ENST00000551436 CUX1P39880 1505 aa15.78■□□□□ 0.12
KRT4-203ENST00000551436 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
KRT4-203ENST00000551436 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
KRT4-203ENST00000551436 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
KRT4-203ENST00000551436 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
KRT4-203ENST00000551436 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
KRT4-203ENST00000551436 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
KRT4-203ENST00000551436 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
KRT4-203ENST00000551436 WDR62O43379 1518 aa15.73■□□□□ 0.11
KRT4-203ENST00000551436 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
KRT4-203ENST00000551436 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
KRT4-203ENST00000551436 FBLN2P98095 1184 aa15.72■□□□□ 0.11
KRT4-203ENST00000551436 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
KRT4-203ENST00000551436 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
KRT4-203ENST00000551436 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
KRT4-203ENST00000551436 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
KRT4-203ENST00000551436 SPDYE1Q8NFV5 336 aaPredicted RBP15.66■□□□□ 0.1
KRT4-203ENST00000551436 SOGA1O94964 1423 aa15.66■□□□□ 0.1
KRT4-203ENST00000551436 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
KRT4-203ENST00000551436 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
KRT4-203ENST00000551436 CUX2O14529 1486 aa15.6■□□□□ 0.09
KRT4-203ENST00000551436 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
KRT4-203ENST00000551436 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
KRT4-203ENST00000551436 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
KRT4-203ENST00000551436 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
KRT4-203ENST00000551436 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
KRT4-203ENST00000551436 GABBR2O75899 941 aa15.55■□□□□ 0.08
KRT4-203ENST00000551436 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
KRT4-203ENST00000551436 EEA1Q15075 1411 aa15.52■□□□□ 0.08
KRT4-203ENST00000551436 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
KRT4-203ENST00000551436 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
KRT4-203ENST00000551436 FAM9AQ8IZU1 332 aaPredicted RBP15.5■□□□□ 0.07
KRT4-203ENST00000551436 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
KRT4-203ENST00000551436 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
KRT4-203ENST00000551436 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.07
KRT4-203ENST00000551436 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
KRT4-203ENST00000551436 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.06
KRT4-203ENST00000551436 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
KRT4-203ENST00000551436 LHX8Q68G74 356 aa15.43■□□□□ 0.06
KRT4-203ENST00000551436 IGF1RP08069 1367 aa15.42■□□□□ 0.06
KRT4-203ENST00000551436 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
KRT4-203ENST00000551436 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
KRT4-203ENST00000551436 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
KRT4-203ENST00000551436 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
KRT4-203ENST00000551436 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
KRT4-203ENST00000551436 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
KRT4-203ENST00000551436 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
KRT4-203ENST00000551436 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
KRT4-203ENST00000551436 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
KRT4-203ENST00000551436 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
KRT4-203ENST00000551436 CUL7Q14999 1698 aa15.3■□□□□ 0.04
KRT4-203ENST00000551436 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
KRT4-203ENST00000551436 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
KRT4-203ENST00000551436 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
KRT4-203ENST00000551436 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
KRT4-203ENST00000551436 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
KRT4-203ENST00000551436 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
KRT4-203ENST00000551436 KIF21BO75037 1637 aa15.25■□□□□ 0.03
KRT4-203ENST00000551436 ADAMTS12P58397 1594 aa15.25■□□□□ 0.03
KRT4-203ENST00000551436 GOLGA3Q08378 1498 aa15.25■□□□□ 0.03
KRT4-203ENST00000551436 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
KRT4-203ENST00000551436 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
KRT4-203ENST00000551436 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
KRT4-203ENST00000551436 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
KRT4-203ENST00000551436 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
KRT4-203ENST00000551436 TNIKQ9UKE5 1360 aa15.14■□□□□ 0.01
KRT4-203ENST00000551436 NUP160Q12769 1436 aa15.1■□□□□ 0.01
KRT4-203ENST00000551436 CHD1O14646 1710 aa15.09■□□□□ 0.01
KRT4-203ENST00000551436 KIAA0586Q9BVV6 1533 aa15.08■□□□□ 0.01
KRT4-203ENST00000551436 CEP170Q5SW79 1584 aa15.06■□□□□ 0
KRT4-203ENST00000551436 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
KRT4-203ENST00000551436 JPH4Q96JJ6 628 aa15.03■□□□□ -0
KRT4-203ENST00000551436 IQGAP2Q13576 1575 aa15.02■□□□□ -0
KRT4-203ENST00000551436 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
KRT4-203ENST00000551436 CEP162Q5TB80 1403 aa15□□□□□ -0.01
KRT4-203ENST00000551436 CLCN6P51797 869 aa15□□□□□ -0.01
KRT4-203ENST00000551436 CLIP1P30622 1438 aa15□□□□□ -0.01
KRT4-203ENST00000551436 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
KRT4-203ENST00000551436 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
KRT4-203ENST00000551436 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
KRT4-203ENST00000551436 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.02
KRT4-203ENST00000551436 ZNF579Q8NAF0 562 aaKnown RBP14.95□□□□□ -0.02
KRT4-203ENST00000551436 EFCAB5A4FU69 1503 aa14.94□□□□□ -0.02
KRT4-203ENST00000551436 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
KRT4-203ENST00000551436 P3H3Q8IVL6 736 aa14.93□□□□□ -0.02
KRT4-203ENST00000551436 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
KRT4-203ENST00000551436 ARHGAP35Q9NRY4 1499 aa14.9□□□□□ -0.02
KRT4-203ENST00000551436 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
KRT4-203ENST00000551436 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
KRT4-203ENST00000551436 DISP1Q96F81 1524 aa14.88□□□□□ -0.03
KRT4-203ENST00000551436 SAMD9Q5K651 1589 aa14.88□□□□□ -0.03
KRT4-203ENST00000551436 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
KRT4-203ENST00000551436 KIAA0556O60303 1618 aa14.86□□□□□ -0.03
KRT4-203ENST00000551436 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms