RNA–Protein interactions for RNA: ENST00000551436.1

KRT4-203, Transcript of keratin 4, humanhuman

TSL 2

Gene KRT4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-203ENST00000551436 AEBP2Q6ZN18 517 aaPredicted RBP29.95■■■□□ 2.39
KRT4-203ENST00000551436 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
KRT4-203ENST00000551436 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
KRT4-203ENST00000551436 PHF23Q9BUL5 403 aaPredicted RBP25.16■■□□□ 1.62
KRT4-203ENST00000551436 FOXD1Q16676 465 aa23.92■■□□□ 1.42
KRT4-203ENST00000551436 POTEDQ86YR6 584 aa22.91■■□□□ 1.26
KRT4-203ENST00000551436 MSH5O43196 834 aa22.49■■□□□ 1.19
KRT4-203ENST00000551436 PIAS4Q8N2W9 510 aaPredicted RBP22.18■■□□□ 1.14
KRT4-203ENST00000551436 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
KRT4-203ENST00000551436 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
KRT4-203ENST00000551436 ADRA2BP18089 450 aa21.89■■□□□ 1.09
KRT4-203ENST00000551436 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
KRT4-203ENST00000551436 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
KRT4-203ENST00000551436 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
KRT4-203ENST00000551436 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
KRT4-203ENST00000551436 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
KRT4-203ENST00000551436 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
KRT4-203ENST00000551436 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
KRT4-203ENST00000551436 HOXD11P31277 338 aaPredicted RBP19.24■□□□□ 0.67
KRT4-203ENST00000551436 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
KRT4-203ENST00000551436 RNF39Q9H2S5 420 aa19.2■□□□□ 0.66
KRT4-203ENST00000551436 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
KRT4-203ENST00000551436 RNF216Q9NWF9 866 aaPredicted RBP18.94■□□□□ 0.62
KRT4-203ENST00000551436 C1QBPQ07021 282 aaKnown RBP18.84■□□□□ 0.61
KRT4-203ENST00000551436 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
KRT4-203ENST00000551436 ABCC9O60706 1549 aa18.49■□□□□ 0.55
KRT4-203ENST00000551436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
KRT4-203ENST00000551436 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
KRT4-203ENST00000551436 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
KRT4-203ENST00000551436 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
KRT4-203ENST00000551436 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
KRT4-203ENST00000551436 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
KRT4-203ENST00000551436 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
KRT4-203ENST00000551436 NACADO15069 1562 aa18.04■□□□□ 0.48
KRT4-203ENST00000551436 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
KRT4-203ENST00000551436 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
KRT4-203ENST00000551436 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
KRT4-203ENST00000551436 POTEHQ6S545 545 aa17.82■□□□□ 0.44
KRT4-203ENST00000551436 DSG3P32926 999 aa17.81■□□□□ 0.44
KRT4-203ENST00000551436 CAPN15O75808 1086 aa17.77■□□□□ 0.44
KRT4-203ENST00000551436 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
KRT4-203ENST00000551436 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
KRT4-203ENST00000551436 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
KRT4-203ENST00000551436 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
KRT4-203ENST00000551436 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
KRT4-203ENST00000551436 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
KRT4-203ENST00000551436 ABCB7O75027 752 aa17.36■□□□□ 0.37
KRT4-203ENST00000551436 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
KRT4-203ENST00000551436 KCNA4P22459 653 aa17.33■□□□□ 0.36
KRT4-203ENST00000551436 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
KRT4-203ENST00000551436 APLP2Q06481 763 aa17.21■□□□□ 0.35
KRT4-203ENST00000551436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
KRT4-203ENST00000551436 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
KRT4-203ENST00000551436 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
KRT4-203ENST00000551436 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
KRT4-203ENST00000551436 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
KRT4-203ENST00000551436 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
KRT4-203ENST00000551436 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
KRT4-203ENST00000551436 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
KRT4-203ENST00000551436 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
KRT4-203ENST00000551436 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
KRT4-203ENST00000551436 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
KRT4-203ENST00000551436 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
KRT4-203ENST00000551436 POLA2Q14181 598 aa16.79■□□□□ 0.28
KRT4-203ENST00000551436 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
KRT4-203ENST00000551436 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
KRT4-203ENST00000551436 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
KRT4-203ENST00000551436 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
KRT4-203ENST00000551436 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
KRT4-203ENST00000551436 WIZO95785 1651 aa16.66■□□□□ 0.26
KRT4-203ENST00000551436 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
KRT4-203ENST00000551436 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
KRT4-203ENST00000551436 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
KRT4-203ENST00000551436 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
KRT4-203ENST00000551436 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
KRT4-203ENST00000551436 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
KRT4-203ENST00000551436 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
KRT4-203ENST00000551436 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
KRT4-203ENST00000551436 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
KRT4-203ENST00000551436 PIP4P2Q8N4L2 257 aa16.34■□□□□ 0.21
KRT4-203ENST00000551436 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
KRT4-203ENST00000551436 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
KRT4-203ENST00000551436 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
KRT4-203ENST00000551436 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
KRT4-203ENST00000551436 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
KRT4-203ENST00000551436 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
KRT4-203ENST00000551436 CFTRP13569 1480 aa16.17■□□□□ 0.18
KRT4-203ENST00000551436 HAX1O00165 279 aa16.15■□□□□ 0.18
KRT4-203ENST00000551436 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
KRT4-203ENST00000551436 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
KRT4-203ENST00000551436 NESP48681 1621 aa16.09■□□□□ 0.17
KRT4-203ENST00000551436 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
KRT4-203ENST00000551436 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
KRT4-203ENST00000551436 EVX2Q03828 476 aa16■□□□□ 0.15
KRT4-203ENST00000551436 ZBTB22O15209 634 aa15.97■□□□□ 0.15
KRT4-203ENST00000551436 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
KRT4-203ENST00000551436 ERCC6Q03468 1493 aa15.96■□□□□ 0.14
KRT4-203ENST00000551436 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
KRT4-203ENST00000551436 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
KRT4-203ENST00000551436 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms