RNA–Protein interactions for RNA: ENST00000549443.5

CNOT2-217, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 4

Gene CNOT2, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-217ENST00000549443 CUX2O14529 1486 aa12.71□□□□□ -0.38
CNOT2-217ENST00000549443 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
CNOT2-217ENST00000549443 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
CNOT2-217ENST00000549443 RAD54L2Q9Y4B4 1467 aa12.66□□□□□ -0.38
CNOT2-217ENST00000549443 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
CNOT2-217ENST00000549443 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
CNOT2-217ENST00000549443 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CNOT2-217ENST00000549443 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
CNOT2-217ENST00000549443 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
CNOT2-217ENST00000549443 SOGA1O94964 1423 aa12.62□□□□□ -0.39
CNOT2-217ENST00000549443 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
CNOT2-217ENST00000549443 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
CNOT2-217ENST00000549443 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
CNOT2-217ENST00000549443 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
CNOT2-217ENST00000549443 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.4
CNOT2-217ENST00000549443 BIVM-ERCC5R4GMW8 1640 aa12.56□□□□□ -0.4
CNOT2-217ENST00000549443 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
CNOT2-217ENST00000549443 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
CNOT2-217ENST00000549443 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
CNOT2-217ENST00000549443 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
CNOT2-217ENST00000549443 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
CNOT2-217ENST00000549443 IFT140Q96RY7 1462 aa12.54□□□□□ -0.4
CNOT2-217ENST00000549443 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
CNOT2-217ENST00000549443 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
CNOT2-217ENST00000549443 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
CNOT2-217ENST00000549443 IGF1RP08069 1367 aa12.45□□□□□ -0.42
CNOT2-217ENST00000549443 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
CNOT2-217ENST00000549443 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
CNOT2-217ENST00000549443 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
CNOT2-217ENST00000549443 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
CNOT2-217ENST00000549443 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
CNOT2-217ENST00000549443 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
CNOT2-217ENST00000549443 PROM2Q8N271 834 aa12.38□□□□□ -0.43
CNOT2-217ENST00000549443 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
CNOT2-217ENST00000549443 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
CNOT2-217ENST00000549443 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
CNOT2-217ENST00000549443 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
CNOT2-217ENST00000549443 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-217ENST00000549443 CARMIL1Q5VZK9 1371 aa12.3□□□□□ -0.44
CNOT2-217ENST00000549443 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
CNOT2-217ENST00000549443 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
CNOT2-217ENST00000549443 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
CNOT2-217ENST00000549443 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
CNOT2-217ENST00000549443 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.44
CNOT2-217ENST00000549443 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
CNOT2-217ENST00000549443 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
CNOT2-217ENST00000549443 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
CNOT2-217ENST00000549443 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
CNOT2-217ENST00000549443 LOC105371045A0A1W2PR82 267 aa12.23□□□□□ -0.45
CNOT2-217ENST00000549443 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
CNOT2-217ENST00000549443 CHD1O14646 1710 aa12.23□□□□□ -0.45
CNOT2-217ENST00000549443 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
CNOT2-217ENST00000549443 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.46
CNOT2-217ENST00000549443 NUP160Q12769 1436 aa12.2□□□□□ -0.46
CNOT2-217ENST00000549443 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
CNOT2-217ENST00000549443 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
CNOT2-217ENST00000549443 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-217ENST00000549443 EEA1Q15075 1411 aa12.18□□□□□ -0.46
CNOT2-217ENST00000549443 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
CNOT2-217ENST00000549443 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
CNOT2-217ENST00000549443 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CNOT2-217ENST00000549443 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
CNOT2-217ENST00000549443 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
CNOT2-217ENST00000549443 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
CNOT2-217ENST00000549443 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
CNOT2-217ENST00000549443 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
CNOT2-217ENST00000549443 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
CNOT2-217ENST00000549443 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
CNOT2-217ENST00000549443 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
CNOT2-217ENST00000549443 KIF21BO75037 1637 aa12.06□□□□□ -0.48
CNOT2-217ENST00000549443 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
CNOT2-217ENST00000549443 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
CNOT2-217ENST00000549443 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
CNOT2-217ENST00000549443 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
CNOT2-217ENST00000549443 SHROOM2Q13796 1616 aa12.03□□□□□ -0.48
CNOT2-217ENST00000549443 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
CNOT2-217ENST00000549443 ARHGEF11O15085 1522 aa12.02□□□□□ -0.48
CNOT2-217ENST00000549443 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
CNOT2-217ENST00000549443 RIMBP3CA6NJZ7 1639 aa12.01□□□□□ -0.49
CNOT2-217ENST00000549443 RIMBP3BA6NNM3 1639 aa12.01□□□□□ -0.49
CNOT2-217ENST00000549443 RIMBP3Q9UFD9 1639 aa12.01□□□□□ -0.49
CNOT2-217ENST00000549443 MIER1Q8N108 512 aa12.01□□□□□ -0.49
CNOT2-217ENST00000549443 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
CNOT2-217ENST00000549443 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
CNOT2-217ENST00000549443 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
CNOT2-217ENST00000549443 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
CNOT2-217ENST00000549443 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
CNOT2-217ENST00000549443 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
CNOT2-217ENST00000549443 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
CNOT2-217ENST00000549443 ARHGAP35Q9NRY4 1499 aa11.94□□□□□ -0.5
CNOT2-217ENST00000549443 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
CNOT2-217ENST00000549443 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-217ENST00000549443 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
CNOT2-217ENST00000549443 PTPRGP23470 1445 aa11.93□□□□□ -0.5
CNOT2-217ENST00000549443 FHOD3Q2V2M9 1422 aa11.92□□□□□ -0.5
CNOT2-217ENST00000549443 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
CNOT2-217ENST00000549443 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
CNOT2-217ENST00000549443 CARMIL2Q6F5E8 1435 aa11.89□□□□□ -0.51
CNOT2-217ENST00000549443 CLIP1P30622 1438 aa11.87□□□□□ -0.51
CNOT2-217ENST00000549443 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms