RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 MYT1Q01538 1121 aa17.62■□□□□ 0.41
SLC38A1-206ENST00000549049 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
SLC38A1-206ENST00000549049 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
SLC38A1-206ENST00000549049 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
SLC38A1-206ENST00000549049 ARID3CA6NKF2 412 aa17.59■□□□□ 0.41
SLC38A1-206ENST00000549049 CFTRP13569 1480 aa17.56■□□□□ 0.4
SLC38A1-206ENST00000549049 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
SLC38A1-206ENST00000549049 ANP32CO43423 234 aa17.54■□□□□ 0.4
SLC38A1-206ENST00000549049 NEFLP07196 543 aa17.53■□□□□ 0.4
SLC38A1-206ENST00000549049 CHIC2Q9UKJ5 165 aa17.52■□□□□ 0.4
SLC38A1-206ENST00000549049 WDR97A6NE52 1622 aa17.52■□□□□ 0.39
SLC38A1-206ENST00000549049 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
SLC38A1-206ENST00000549049 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
SLC38A1-206ENST00000549049 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
SLC38A1-206ENST00000549049 IRX6P78412 446 aaPredicted RBP17.5■□□□□ 0.39
SLC38A1-206ENST00000549049 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
SLC38A1-206ENST00000549049 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
SLC38A1-206ENST00000549049 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
SLC38A1-206ENST00000549049 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
SLC38A1-206ENST00000549049 TONSLQ96HA7 1378 aa17.47■□□□□ 0.39
SLC38A1-206ENST00000549049 RRP7BPQ9NSQ0 103 aa17.46■□□□□ 0.39
SLC38A1-206ENST00000549049 TIAM1Q13009 1591 aa17.45■□□□□ 0.38
SLC38A1-206ENST00000549049 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
SLC38A1-206ENST00000549049 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
SLC38A1-206ENST00000549049 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
SLC38A1-206ENST00000549049 HNRNPUQ00839 825 aaKnown RBP eCLIP17.4■□□□□ 0.38
SLC38A1-206ENST00000549049 FOXD1Q16676 465 aa17.37■□□□□ 0.37
SLC38A1-206ENST00000549049 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
SLC38A1-206ENST00000549049 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
SLC38A1-206ENST00000549049 PCF11O94913 1555 aaKnown RBP17.34■□□□□ 0.37
SLC38A1-206ENST00000549049 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
SLC38A1-206ENST00000549049 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
SLC38A1-206ENST00000549049 NESP48681 1621 aa17.32■□□□□ 0.36
SLC38A1-206ENST00000549049 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
SLC38A1-206ENST00000549049 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
SLC38A1-206ENST00000549049 PTPRKQ15262 1439 aa17.28■□□□□ 0.36
SLC38A1-206ENST00000549049 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
SLC38A1-206ENST00000549049 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
SLC38A1-206ENST00000549049 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
SLC38A1-206ENST00000549049 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.35
SLC38A1-206ENST00000549049 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
SLC38A1-206ENST00000549049 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
SLC38A1-206ENST00000549049 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
SLC38A1-206ENST00000549049 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
SLC38A1-206ENST00000549049 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
SLC38A1-206ENST00000549049 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
SLC38A1-206ENST00000549049 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
SLC38A1-206ENST00000549049 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.35
SLC38A1-206ENST00000549049 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.354e-7■■■■□ 24.2
SLC38A1-206ENST00000549049 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
SLC38A1-206ENST00000549049 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
SLC38A1-206ENST00000549049 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
SLC38A1-206ENST00000549049 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
SLC38A1-206ENST00000549049 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 15
SLC38A1-206ENST00000549049 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
SLC38A1-206ENST00000549049 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
SLC38A1-206ENST00000549049 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
SLC38A1-206ENST00000549049 NCOA2Q15596 1464 aa17.14■□□□□ 0.34
SLC38A1-206ENST00000549049 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
SLC38A1-206ENST00000549049 NAIPQ13075 1403 aa17.14■□□□□ 0.33
SLC38A1-206ENST00000549049 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
SLC38A1-206ENST00000549049 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
SLC38A1-206ENST00000549049 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
SLC38A1-206ENST00000549049 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
SLC38A1-206ENST00000549049 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
SLC38A1-206ENST00000549049 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
SLC38A1-206ENST00000549049 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
SLC38A1-206ENST00000549049 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
SLC38A1-206ENST00000549049 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
SLC38A1-206ENST00000549049 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
SLC38A1-206ENST00000549049 CFAP43Q8NDM7 1665 aa17.09■□□□□ 0.33
SLC38A1-206ENST00000549049 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
SLC38A1-206ENST00000549049 MSH5O43196 834 aa17.07■□□□□ 0.32
SLC38A1-206ENST00000549049 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
SLC38A1-206ENST00000549049 DNMBPQ6XZF7 1577 aa17.05■□□□□ 0.32
SLC38A1-206ENST00000549049 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
SLC38A1-206ENST00000549049 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
SLC38A1-206ENST00000549049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.04■□□□□ 0.32
SLC38A1-206ENST00000549049 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
SLC38A1-206ENST00000549049 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
SLC38A1-206ENST00000549049 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.31
SLC38A1-206ENST00000549049 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
SLC38A1-206ENST00000549049 FBLN2P98095 1184 aa17■□□□□ 0.31
SLC38A1-206ENST00000549049 PRDM2Q13029 1718 aa16.98■□□□□ 0.31
SLC38A1-206ENST00000549049 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
SLC38A1-206ENST00000549049 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
SLC38A1-206ENST00000549049 MAGI3Q5TCQ9 1506 aa16.96■□□□□ 0.3
SLC38A1-206ENST00000549049 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
SLC38A1-206ENST00000549049 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
SLC38A1-206ENST00000549049 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
SLC38A1-206ENST00000549049 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
SLC38A1-206ENST00000549049 CCDC7Q96M83 1385 aa16.94■□□□□ 0.3
SLC38A1-206ENST00000549049 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
SLC38A1-206ENST00000549049 KDM6BO15054 1643 aa16.93■□□□□ 0.3
SLC38A1-206ENST00000549049 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
SLC38A1-206ENST00000549049 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
SLC38A1-206ENST00000549049 CNTLNQ9NXG0 1405 aa16.91■□□□□ 0.3
SLC38A1-206ENST00000549049 CUL7Q14999 1698 aa16.9■□□□□ 0.3
SLC38A1-206ENST00000549049 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
SLC38A1-206ENST00000549049 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms