RNA–Protein interactions for RNA: ENST00000548790.1

PPFIA2-213, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-213ENST00000548790 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
PPFIA2-213ENST00000548790 CFTRP13569 1480 aa12.31□□□□□ -0.44
PPFIA2-213ENST00000548790 RIMBP3CA6NJZ7 1639 aa12.3□□□□□ -0.44
PPFIA2-213ENST00000548790 RIMBP3BA6NNM3 1639 aa12.3□□□□□ -0.44
PPFIA2-213ENST00000548790 RIMBP3Q9UFD9 1639 aa12.3□□□□□ -0.44
PPFIA2-213ENST00000548790 WIZO95785 1651 aa12.3□□□□□ -0.44
PPFIA2-213ENST00000548790 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-213ENST00000548790 ARHGEF11O15085 1522 aa12.27□□□□□ -0.44
PPFIA2-213ENST00000548790 POTEHQ6S545 545 aa12.26□□□□□ -0.45
PPFIA2-213ENST00000548790 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
PPFIA2-213ENST00000548790 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
PPFIA2-213ENST00000548790 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
PPFIA2-213ENST00000548790 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-213ENST00000548790 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
PPFIA2-213ENST00000548790 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
PPFIA2-213ENST00000548790 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
PPFIA2-213ENST00000548790 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
PPFIA2-213ENST00000548790 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
PPFIA2-213ENST00000548790 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
PPFIA2-213ENST00000548790 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
PPFIA2-213ENST00000548790 EIF4G3O43432 1585 aaKnown RBP12.11□□□□□ -0.47
PPFIA2-213ENST00000548790 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
PPFIA2-213ENST00000548790 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
PPFIA2-213ENST00000548790 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
PPFIA2-213ENST00000548790 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
PPFIA2-213ENST00000548790 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
PPFIA2-213ENST00000548790 PROM2Q8N271 834 aa12.04□□□□□ -0.48
PPFIA2-213ENST00000548790 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
PPFIA2-213ENST00000548790 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
PPFIA2-213ENST00000548790 CHD1O14646 1710 aa12.03□□□□□ -0.48
PPFIA2-213ENST00000548790 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
PPFIA2-213ENST00000548790 PRR29P0C7W0 189 aa12□□□□□ -0.49
PPFIA2-213ENST00000548790 TARBP1Q13395 1621 aaKnown RBP11.98□□□□□ -0.49
PPFIA2-213ENST00000548790 POLA1P09884 1462 aaPredicted RBP11.97□□□□□ -0.49
PPFIA2-213ENST00000548790 TDRD9Q8NDG6 1382 aaKnown RBP11.96□□□□□ -0.49
PPFIA2-213ENST00000548790 CHMP7Q8WUX9 453 aaPredicted RBP11.96□□□□□ -0.49
PPFIA2-213ENST00000548790 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
PPFIA2-213ENST00000548790 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
PPFIA2-213ENST00000548790 SOGA1O94964 1423 aa11.94□□□□□ -0.5
PPFIA2-213ENST00000548790 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
PPFIA2-213ENST00000548790 CLASP1Q7Z460 1538 aa11.93□□□□□ -0.5
PPFIA2-213ENST00000548790 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
PPFIA2-213ENST00000548790 MAGI1Q96QZ7 1491 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-213ENST00000548790 FKBP8Q14318 412 aa11.88□□□□□ -0.51
PPFIA2-213ENST00000548790 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
PPFIA2-213ENST00000548790 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
PPFIA2-213ENST00000548790 FGD5Q6ZNL6 1462 aa11.87□□□□□ -0.51
PPFIA2-213ENST00000548790 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
PPFIA2-213ENST00000548790 SYNJ2O15056 1496 aa11.86□□□□□ -0.51
PPFIA2-213ENST00000548790 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
PPFIA2-213ENST00000548790 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
PPFIA2-213ENST00000548790 CUX1P39880 1505 aa11.77□□□□□ -0.52
PPFIA2-213ENST00000548790 HAX1O00165 279 aa11.76□□□□□ -0.53
PPFIA2-213ENST00000548790 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
PPFIA2-213ENST00000548790 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.53
PPFIA2-213ENST00000548790 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
PPFIA2-213ENST00000548790 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
PPFIA2-213ENST00000548790 PBRM1Q86U86 1689 aa11.71□□□□□ -0.54
PPFIA2-213ENST00000548790 ABCA10Q8WWZ4 1543 aa11.7□□□□□ -0.54
PPFIA2-213ENST00000548790 CEP170Q5SW79 1584 aa11.68□□□□□ -0.54
PPFIA2-213ENST00000548790 NUP160Q12769 1436 aa11.68□□□□□ -0.54
PPFIA2-213ENST00000548790 ABCA5Q8WWZ7 1642 aa11.68□□□□□ -0.54
PPFIA2-213ENST00000548790 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
PPFIA2-213ENST00000548790 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
PPFIA2-213ENST00000548790 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
PPFIA2-213ENST00000548790 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
PPFIA2-213ENST00000548790 EVX2Q03828 476 aa11.64□□□□□ -0.55
PPFIA2-213ENST00000548790 FAM69CQ0P6D2 419 aa11.64□□□□□ -0.55
PPFIA2-213ENST00000548790 FHAD1B1AJZ9 1412 aa11.63□□□□□ -0.55
PPFIA2-213ENST00000548790 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
PPFIA2-213ENST00000548790 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
PPFIA2-213ENST00000548790 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
PPFIA2-213ENST00000548790 MIER1Q8N108 512 aa11.6□□□□□ -0.55
PPFIA2-213ENST00000548790 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
PPFIA2-213ENST00000548790 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
PPFIA2-213ENST00000548790 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
PPFIA2-213ENST00000548790 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
PPFIA2-213ENST00000548790 KIF13AQ9H1H9 1805 aa11.56□□□□□ -0.56
PPFIA2-213ENST00000548790 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
PPFIA2-213ENST00000548790 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
PPFIA2-213ENST00000548790 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
PPFIA2-213ENST00000548790 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
PPFIA2-213ENST00000548790 KDM6BO15054 1643 aa11.54□□□□□ -0.56
PPFIA2-213ENST00000548790 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
PPFIA2-213ENST00000548790 DIP2BQ9P265 1576 aa11.53□□□□□ -0.56
PPFIA2-213ENST00000548790 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
PPFIA2-213ENST00000548790 CLCN6P51797 869 aa11.51□□□□□ -0.57
PPFIA2-213ENST00000548790 ZBTB47Q9UFB7 747 aaPredicted RBP11.5□□□□□ -0.57
PPFIA2-213ENST00000548790 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
PPFIA2-213ENST00000548790 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
PPFIA2-213ENST00000548790 ADCY10Q96PN6 1610 aa11.46□□□□□ -0.57
PPFIA2-213ENST00000548790 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.58
PPFIA2-213ENST00000548790 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-213ENST00000548790 VASPP50552 380 aaPredicted RBP11.44□□□□□ -0.58
PPFIA2-213ENST00000548790 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
PPFIA2-213ENST00000548790 ZRANB1Q9UGI0 708 aa11.44□□□□□ -0.58
PPFIA2-213ENST00000548790 TTBK1Q5TCY1 1321 aaPredicted RBP11.43□□□□□ -0.58
PPFIA2-213ENST00000548790 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-213ENST00000548790 GABBR2O75899 941 aa11.43□□□□□ -0.58
PPFIA2-213ENST00000548790 ADGRL1O94910 1474 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms