RNA–Protein interactions for RNA: ENST00000548790.1

PPFIA2-213, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-213ENST00000548790 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
PPFIA2-213ENST00000548790 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
PPFIA2-213ENST00000548790 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
PPFIA2-213ENST00000548790 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
PPFIA2-213ENST00000548790 FOXD1Q16676 465 aa17.8■□□□□ 0.44
PPFIA2-213ENST00000548790 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
PPFIA2-213ENST00000548790 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
PPFIA2-213ENST00000548790 ADRA2BP18089 450 aa16.84■□□□□ 0.29
PPFIA2-213ENST00000548790 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
PPFIA2-213ENST00000548790 MSH5O43196 834 aa16.58■□□□□ 0.24
PPFIA2-213ENST00000548790 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
PPFIA2-213ENST00000548790 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
PPFIA2-213ENST00000548790 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
PPFIA2-213ENST00000548790 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
PPFIA2-213ENST00000548790 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
PPFIA2-213ENST00000548790 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.04
PPFIA2-213ENST00000548790 ABCC9O60706 1549 aa15.09■□□□□ 0.01
PPFIA2-213ENST00000548790 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
PPFIA2-213ENST00000548790 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
PPFIA2-213ENST00000548790 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
PPFIA2-213ENST00000548790 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
PPFIA2-213ENST00000548790 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
PPFIA2-213ENST00000548790 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
PPFIA2-213ENST00000548790 KCNA4P22459 653 aa14.65□□□□□ -0.06
PPFIA2-213ENST00000548790 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
PPFIA2-213ENST00000548790 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
PPFIA2-213ENST00000548790 RB1CC1Q8TDY2 1594 aa14.18□□□□□ -0.14
PPFIA2-213ENST00000548790 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
PPFIA2-213ENST00000548790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
PPFIA2-213ENST00000548790 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
PPFIA2-213ENST00000548790 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
PPFIA2-213ENST00000548790 NACADO15069 1562 aa13.99□□□□□ -0.17
PPFIA2-213ENST00000548790 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
PPFIA2-213ENST00000548790 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
PPFIA2-213ENST00000548790 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
PPFIA2-213ENST00000548790 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
PPFIA2-213ENST00000548790 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
PPFIA2-213ENST00000548790 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
PPFIA2-213ENST00000548790 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
PPFIA2-213ENST00000548790 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
PPFIA2-213ENST00000548790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
PPFIA2-213ENST00000548790 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
PPFIA2-213ENST00000548790 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
PPFIA2-213ENST00000548790 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
PPFIA2-213ENST00000548790 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
PPFIA2-213ENST00000548790 MYCNP04198 464 aaPredicted RBP13.57□□□□□ -0.24
PPFIA2-213ENST00000548790 APLP2Q06481 763 aa13.57□□□□□ -0.24
PPFIA2-213ENST00000548790 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-213ENST00000548790 CC2D2AQ9P2K1 1620 aa13.55□□□□□ -0.24
PPFIA2-213ENST00000548790 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
PPFIA2-213ENST00000548790 ZBTB22O15209 634 aa13.48□□□□□ -0.25
PPFIA2-213ENST00000548790 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
PPFIA2-213ENST00000548790 CAPN15O75808 1086 aa13.46□□□□□ -0.25
PPFIA2-213ENST00000548790 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
PPFIA2-213ENST00000548790 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
PPFIA2-213ENST00000548790 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
PPFIA2-213ENST00000548790 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
PPFIA2-213ENST00000548790 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
PPFIA2-213ENST00000548790 DSG3P32926 999 aa13.36□□□□□ -0.27
PPFIA2-213ENST00000548790 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
PPFIA2-213ENST00000548790 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
PPFIA2-213ENST00000548790 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
PPFIA2-213ENST00000548790 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
PPFIA2-213ENST00000548790 CUX2O14529 1486 aa13.13□□□□□ -0.31
PPFIA2-213ENST00000548790 ABCB7O75027 752 aa13.13□□□□□ -0.31
PPFIA2-213ENST00000548790 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
PPFIA2-213ENST00000548790 POLA2Q14181 598 aa13.09□□□□□ -0.31
PPFIA2-213ENST00000548790 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
PPFIA2-213ENST00000548790 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
PPFIA2-213ENST00000548790 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
PPFIA2-213ENST00000548790 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
PPFIA2-213ENST00000548790 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
PPFIA2-213ENST00000548790 NESP48681 1621 aa12.83□□□□□ -0.36
PPFIA2-213ENST00000548790 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
PPFIA2-213ENST00000548790 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
PPFIA2-213ENST00000548790 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
PPFIA2-213ENST00000548790 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
PPFIA2-213ENST00000548790 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
PPFIA2-213ENST00000548790 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
PPFIA2-213ENST00000548790 FBLN2P98095 1184 aa12.69□□□□□ -0.38
PPFIA2-213ENST00000548790 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
PPFIA2-213ENST00000548790 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
PPFIA2-213ENST00000548790 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
PPFIA2-213ENST00000548790 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
PPFIA2-213ENST00000548790 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
PPFIA2-213ENST00000548790 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
PPFIA2-213ENST00000548790 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
PPFIA2-213ENST00000548790 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
PPFIA2-213ENST00000548790 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
PPFIA2-213ENST00000548790 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
PPFIA2-213ENST00000548790 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
PPFIA2-213ENST00000548790 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
PPFIA2-213ENST00000548790 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
PPFIA2-213ENST00000548790 WDR62O43379 1518 aa12.52□□□□□ -0.41
PPFIA2-213ENST00000548790 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
PPFIA2-213ENST00000548790 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.41
PPFIA2-213ENST00000548790 FANCD2Q9BXW9 1451 aa12.41□□□□□ -0.42
PPFIA2-213ENST00000548790 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
PPFIA2-213ENST00000548790 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
PPFIA2-213ENST00000548790 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms