RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 RAD54L2Q9Y4B4 1467 aa8.58□□□□□ -1.04
APP-217ENST00000548570 FOXD4L1Q9NU39 408 aa8.58□□□□□ -1.04
APP-217ENST00000548570 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
APP-217ENST00000548570 SLC4A1APQ9BWU0 796 aaKnown RBP8.56□□□□□ -1.04
APP-217ENST00000548570 SOGA1O94964 1423 aa8.55□□□□□ -1.04
APP-217ENST00000548570 SP7Q8TDD2 431 aaPredicted RBP8.55□□□□□ -1.04
APP-217ENST00000548570 ZNF608Q9ULD9 1512 aaPredicted RBP8.54□□□□□ -1.04
APP-217ENST00000548570 BIVM-ERCC5R4GMW8 1640 aa8.54□□□□□ -1.04
APP-217ENST00000548570 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
APP-217ENST00000548570 IFT140Q96RY7 1462 aa8.53□□□□□ -1.04
APP-217ENST00000548570 TARBP1Q13395 1621 aaKnown RBP8.53□□□□□ -1.04
APP-217ENST00000548570 TDRD9Q8NDG6 1382 aaKnown RBP8.52□□□□□ -1.05
APP-217ENST00000548570 ABCA10Q8WWZ4 1543 aa8.52□□□□□ -1.05
APP-217ENST00000548570 REM2Q8IYK8 340 aaPredicted RBP8.51□□□□□ -1.05
APP-217ENST00000548570 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
APP-217ENST00000548570 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
APP-217ENST00000548570 OSCARQ8IYS5 282 aa8.48□□□□□ -1.05
APP-217ENST00000548570 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.06
APP-217ENST00000548570 ATF5Q9Y2D1 282 aaPredicted RBP8.46□□□□□ -1.06
APP-217ENST00000548570 IGF1RP08069 1367 aa8.46□□□□□ -1.06
APP-217ENST00000548570 HAX1O00165 279 aa8.45□□□□□ -1.06
APP-217ENST00000548570 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
APP-217ENST00000548570 GAPVD1Q14C86 1478 aa8.44□□□□□ -1.06
APP-217ENST00000548570 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
APP-217ENST00000548570 KIF27Q86VH2 1401 aa8.43□□□□□ -1.06
APP-217ENST00000548570 EIF4G3O43432 1585 aaKnown RBP8.43□□□□□ -1.06
APP-217ENST00000548570 GRIN2BQ13224 1484 aa8.41□□□□□ -1.06
APP-217ENST00000548570 PITPNM1O00562 1244 aa8.4□□□□□ -1.06
APP-217ENST00000548570 SNAPC4Q5SXM2 1469 aa8.39□□□□□ -1.07
APP-217ENST00000548570 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
APP-217ENST00000548570 ATXN8OSP0DMR3 200 aa8.38□□□□□ -1.07
APP-217ENST00000548570 FXR2P51116 673 aaKnown RBP eCLIP8.38□□□□□ -1.07
APP-217ENST00000548570 FBLN2P98095 1184 aa8.38□□□□□ -1.07
APP-217ENST00000548570 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
APP-217ENST00000548570 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
APP-217ENST00000548570 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
APP-217ENST00000548570 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
APP-217ENST00000548570 MAGI1Q96QZ7 1491 aaPredicted RBP8.36□□□□□ -1.07
APP-217ENST00000548570 FHAD1B1AJZ9 1412 aa8.36□□□□□ -1.07
APP-217ENST00000548570 EEA1Q15075 1411 aa8.36□□□□□ -1.07
APP-217ENST00000548570 SYNJ2O15056 1496 aa8.34□□□□□ -1.07
APP-217ENST00000548570 SPDYE2BA6NHP3 402 aa8.34□□□□□ -1.07
APP-217ENST00000548570 SPDYE6P0CI01 402 aa8.34□□□□□ -1.07
APP-217ENST00000548570 SPDYE2Q495Y8 402 aa8.34□□□□□ -1.07
APP-217ENST00000548570 ADAMTS12P58397 1594 aa8.34□□□□□ -1.07
APP-217ENST00000548570 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
APP-217ENST00000548570 CHMP7Q8WUX9 453 aaPredicted RBP8.32□□□□□ -1.08
APP-217ENST00000548570 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
APP-217ENST00000548570 PBRM1Q86U86 1689 aa8.3□□□□□ -1.08
APP-217ENST00000548570 NUP160Q12769 1436 aa8.3□□□□□ -1.08
APP-217ENST00000548570 LOC105371045A0A1W2PR82 267 aa8.28□□□□□ -1.08
APP-217ENST00000548570 SPDYE1Q8NFV5 336 aaPredicted RBP8.28□□□□□ -1.08
APP-217ENST00000548570 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
APP-217ENST00000548570 EHMT2Q96KQ7 1210 aa8.27□□□□□ -1.09
APP-217ENST00000548570 CUL7Q14999 1698 aa8.27□□□□□ -1.09
APP-217ENST00000548570 CLASP1Q7Z460 1538 aa8.25□□□□□ -1.09
APP-217ENST00000548570 CLEC11AQ9Y240 323 aa8.25□□□□□ -1.09
APP-217ENST00000548570 KIF21BO75037 1637 aa8.25□□□□□ -1.09
APP-217ENST00000548570 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
APP-217ENST00000548570 KIAA0586Q9BVV6 1533 aa8.24□□□□□ -1.09
APP-217ENST00000548570 PRKAR2AP13861 404 aaKnown RBP8.23□□□□□ -1.09
APP-217ENST00000548570 ZBTB22O15209 634 aa8.22□□□□□ -1.09
APP-217ENST00000548570 CHD1O14646 1710 aa8.22□□□□□ -1.09
APP-217ENST00000548570 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
APP-217ENST00000548570 ZNF692Q9BU19 519 aaPredicted RBP8.21□□□□□ -1.1
APP-217ENST00000548570 TNIKQ9UKE5 1360 aa8.21□□□□□ -1.1
APP-217ENST00000548570 ERCC6L2Q5T890 1561 aa8.19□□□□□ -1.1
APP-217ENST00000548570 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
APP-217ENST00000548570 DNAJC5Q9H3Z4 198 aa8.18□□□□□ -1.1
APP-217ENST00000548570 DISP1Q96F81 1524 aa8.18□□□□□ -1.1
APP-217ENST00000548570 PRG4Q92954 1404 aaPredicted RBP8.17□□□□□ -1.1
APP-217ENST00000548570 UGGT2Q9NYU1 1516 aa8.17□□□□□ -1.1
APP-217ENST00000548570 IQGAP2Q13576 1575 aa8.16□□□□□ -1.1
APP-217ENST00000548570 SHROOM2Q13796 1616 aa8.16□□□□□ -1.1
APP-217ENST00000548570 RANGAP1P46060 587 aaPredicted RBP8.15□□□□□ -1.1
APP-217ENST00000548570 EVX2Q03828 476 aa8.15□□□□□ -1.1
APP-217ENST00000548570 ARHGAP35Q9NRY4 1499 aa8.14□□□□□ -1.11
APP-217ENST00000548570 P3H3Q8IVL6 736 aa8.14□□□□□ -1.11
APP-217ENST00000548570 SSUH2Q9Y2M2 353 aa8.14□□□□□ -1.11
APP-217ENST00000548570 ARHGEF11O15085 1522 aa8.13□□□□□ -1.11
APP-217ENST00000548570 ARAP1Q96P48 1450 aa8.13□□□□□ -1.11
APP-217ENST00000548570 CEP162Q5TB80 1403 aa8.12□□□□□ -1.11
APP-217ENST00000548570 C19orf67A6NJJ6 358 aa8.12□□□□□ -1.11
APP-217ENST00000548570 SAMD9Q5K651 1589 aa8.12□□□□□ -1.11
APP-217ENST00000548570 CLIP1P30622 1438 aa8.12□□□□□ -1.11
APP-217ENST00000548570 FHOD3Q2V2M9 1422 aa8.12□□□□□ -1.11
APP-217ENST00000548570 KIAA0556O60303 1618 aa8.11□□□□□ -1.11
APP-217ENST00000548570 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
APP-217ENST00000548570 CTTNBP2Q8WZ74 1663 aa8.09□□□□□ -1.11
APP-217ENST00000548570 PTPRGP23470 1445 aa8.09□□□□□ -1.11
APP-217ENST00000548570 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
APP-217ENST00000548570 RIMBP3CA6NJZ7 1639 aa8.08□□□□□ -1.12
APP-217ENST00000548570 RIMBP3BA6NNM3 1639 aa8.08□□□□□ -1.12
APP-217ENST00000548570 RIMBP3Q9UFD9 1639 aa8.08□□□□□ -1.12
APP-217ENST00000548570 MKRN4PQ13434 485 aaPredicted RBP8.08□□□□□ -1.12
APP-217ENST00000548570 CYB5RLQ6IPT4 315 aa8.07□□□□□ -1.12
APP-217ENST00000548570 EFCAB5A4FU69 1503 aa8.07□□□□□ -1.12
APP-217ENST00000548570 PLB1Q6P1J6 1458 aa8.06□□□□□ -1.12
APP-217ENST00000548570 TTBK1Q5TCY1 1321 aaPredicted RBP8.06□□□□□ -1.12
APP-217ENST00000548570 GABBR2O75899 941 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms