RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
CALCOCO1-210ENST00000548263 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
CALCOCO1-210ENST00000548263 NESP48681 1621 aa13.23□□□□□ -0.29
CALCOCO1-210ENST00000548263 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
CALCOCO1-210ENST00000548263 NCAPD3P42695 1498 aa13.21□□□□□ -0.29
CALCOCO1-210ENST00000548263 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
CALCOCO1-210ENST00000548263 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-210ENST00000548263 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-210ENST00000548263 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
CALCOCO1-210ENST00000548263 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
CALCOCO1-210ENST00000548263 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
CALCOCO1-210ENST00000548263 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
CALCOCO1-210ENST00000548263 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-210ENST00000548263 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
CALCOCO1-210ENST00000548263 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
CALCOCO1-210ENST00000548263 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
CALCOCO1-210ENST00000548263 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
CALCOCO1-210ENST00000548263 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CALCOCO1-210ENST00000548263 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
CALCOCO1-210ENST00000548263 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
CALCOCO1-210ENST00000548263 FAM9BQ8IZU0 186 aa13.11□□□□□ -0.31
CALCOCO1-210ENST00000548263 IGF1RP08069 1367 aa13.1□□□□□ -0.31
CALCOCO1-210ENST00000548263 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
CALCOCO1-210ENST00000548263 CFTRP13569 1480 aa13.08□□□□□ -0.32
CALCOCO1-210ENST00000548263 CUX1P39880 1505 aa13.08□□□□□ -0.32
CALCOCO1-210ENST00000548263 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO1-210ENST00000548263 RBM19Q9Y4C8 960 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-210ENST00000548263 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
CALCOCO1-210ENST00000548263 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
CALCOCO1-210ENST00000548263 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
CALCOCO1-210ENST00000548263 MRS2Q9HD23 443 aa13□□□□□ -0.33
CALCOCO1-210ENST00000548263 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
CALCOCO1-210ENST00000548263 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
CALCOCO1-210ENST00000548263 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■■■■ 33.7
CALCOCO1-210ENST00000548263 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
CALCOCO1-210ENST00000548263 KIF21BO75037 1637 aa12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 CCER2I3L3R5 266 aa12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 NBR1Q14596 966 aa12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 TOP2BQ02880 1626 aa12.96□□□□□ -0.33
CALCOCO1-210ENST00000548263 FOXD1Q16676 465 aa12.96□□□□□ -0.34
CALCOCO1-210ENST00000548263 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
CALCOCO1-210ENST00000548263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■□□ 15.5
CALCOCO1-210ENST00000548263 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
CALCOCO1-210ENST00000548263 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
CALCOCO1-210ENST00000548263 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-210ENST00000548263 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
CALCOCO1-210ENST00000548263 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-210ENST00000548263 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
CALCOCO1-210ENST00000548263 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO1-210ENST00000548263 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
CALCOCO1-210ENST00000548263 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
CALCOCO1-210ENST00000548263 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO1-210ENST00000548263 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
CALCOCO1-210ENST00000548263 CFDP1Q9UEE9 299 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 ARHGAP35Q9NRY4 1499 aa12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
CALCOCO1-210ENST00000548263 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
CALCOCO1-210ENST00000548263 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
CALCOCO1-210ENST00000548263 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-210ENST00000548263 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
CALCOCO1-210ENST00000548263 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
CALCOCO1-210ENST00000548263 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-210ENST00000548263 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
CALCOCO1-210ENST00000548263 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-210ENST00000548263 TSPY4P0CV99 314 aa12.83□□□□□ -0.36
CALCOCO1-210ENST00000548263 TSPY10P0CW01 314 aa12.83□□□□□ -0.36
CALCOCO1-210ENST00000548263 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
CALCOCO1-210ENST00000548263 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
CALCOCO1-210ENST00000548263 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
CALCOCO1-210ENST00000548263 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO1-210ENST00000548263 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
CALCOCO1-210ENST00000548263 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
CALCOCO1-210ENST00000548263 RRBP1Q9P2E9 1410 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-210ENST00000548263 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
CALCOCO1-210ENST00000548263 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CALCOCO1-210ENST00000548263 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-210ENST00000548263 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-210ENST00000548263 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-210ENST00000548263 PLPPR3Q6T4P5 718 aa12.73□□□□□ -0.37
CALCOCO1-210ENST00000548263 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
CALCOCO1-210ENST00000548263 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
CALCOCO1-210ENST00000548263 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO1-210ENST00000548263 LRRC9Q6ZRR7 1453 aa12.71□□□□□ -0.38
CALCOCO1-210ENST00000548263 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 L3MBTL2Q969R5 705 aa12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
CALCOCO1-210ENST00000548263 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
CALCOCO1-210ENST00000548263 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
CALCOCO1-210ENST00000548263 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
CALCOCO1-210ENST00000548263 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
CALCOCO1-210ENST00000548263 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-210ENST00000548263 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
CALCOCO1-210ENST00000548263 WDR62O43379 1518 aa12.65□□□□□ -0.39
CALCOCO1-210ENST00000548263 PKD2Q13563 968 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms