RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
CALCOCO1-210ENST00000548263 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
CALCOCO1-210ENST00000548263 NESP48681 1621 aa13.23□□□□□ -0.29
CALCOCO1-210ENST00000548263 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
CALCOCO1-210ENST00000548263 NCAPD3P42695 1498 aa13.21□□□□□ -0.29
CALCOCO1-210ENST00000548263 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
CALCOCO1-210ENST00000548263 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-210ENST00000548263 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-210ENST00000548263 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
CALCOCO1-210ENST00000548263 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
CALCOCO1-210ENST00000548263 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
CALCOCO1-210ENST00000548263 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
CALCOCO1-210ENST00000548263 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-210ENST00000548263 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
CALCOCO1-210ENST00000548263 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
CALCOCO1-210ENST00000548263 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
CALCOCO1-210ENST00000548263 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
CALCOCO1-210ENST00000548263 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CALCOCO1-210ENST00000548263 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
CALCOCO1-210ENST00000548263 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
CALCOCO1-210ENST00000548263 FAM9BQ8IZU0 186 aa13.11□□□□□ -0.31
CALCOCO1-210ENST00000548263 IGF1RP08069 1367 aa13.1□□□□□ -0.31
CALCOCO1-210ENST00000548263 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
CALCOCO1-210ENST00000548263 CFTRP13569 1480 aa13.08□□□□□ -0.32
CALCOCO1-210ENST00000548263 CUX1P39880 1505 aa13.08□□□□□ -0.32
CALCOCO1-210ENST00000548263 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO1-210ENST00000548263 RBM19Q9Y4C8 960 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-210ENST00000548263 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
CALCOCO1-210ENST00000548263 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
CALCOCO1-210ENST00000548263 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
CALCOCO1-210ENST00000548263 MRS2Q9HD23 443 aa13□□□□□ -0.33
CALCOCO1-210ENST00000548263 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
CALCOCO1-210ENST00000548263 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
CALCOCO1-210ENST00000548263 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■■■■ 33.7
CALCOCO1-210ENST00000548263 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
CALCOCO1-210ENST00000548263 KIF21BO75037 1637 aa12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 CCER2I3L3R5 266 aa12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 NBR1Q14596 966 aa12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-210ENST00000548263 TOP2BQ02880 1626 aa12.96□□□□□ -0.33
CALCOCO1-210ENST00000548263 FOXD1Q16676 465 aa12.96□□□□□ -0.34
CALCOCO1-210ENST00000548263 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
CALCOCO1-210ENST00000548263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■□□ 15.5
CALCOCO1-210ENST00000548263 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
CALCOCO1-210ENST00000548263 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
CALCOCO1-210ENST00000548263 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-210ENST00000548263 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
CALCOCO1-210ENST00000548263 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-210ENST00000548263 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
CALCOCO1-210ENST00000548263 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO1-210ENST00000548263 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
CALCOCO1-210ENST00000548263 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
CALCOCO1-210ENST00000548263 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO1-210ENST00000548263 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
CALCOCO1-210ENST00000548263 CFDP1Q9UEE9 299 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 ARHGAP35Q9NRY4 1499 aa12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
CALCOCO1-210ENST00000548263 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
CALCOCO1-210ENST00000548263 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
CALCOCO1-210ENST00000548263 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
CALCOCO1-210ENST00000548263 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-210ENST00000548263 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
CALCOCO1-210ENST00000548263 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
CALCOCO1-210ENST00000548263 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-210ENST00000548263 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
CALCOCO1-210ENST00000548263 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-210ENST00000548263 TSPY4P0CV99 314 aa12.83□□□□□ -0.36
CALCOCO1-210ENST00000548263 TSPY10P0CW01 314 aa12.83□□□□□ -0.36
CALCOCO1-210ENST00000548263 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
CALCOCO1-210ENST00000548263 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
CALCOCO1-210ENST00000548263 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
CALCOCO1-210ENST00000548263 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO1-210ENST00000548263 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
CALCOCO1-210ENST00000548263 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
CALCOCO1-210ENST00000548263 RRBP1Q9P2E9 1410 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-210ENST00000548263 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
CALCOCO1-210ENST00000548263 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CALCOCO1-210ENST00000548263 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-210ENST00000548263 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-210ENST00000548263 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-210ENST00000548263 PLPPR3Q6T4P5 718 aa12.73□□□□□ -0.37
CALCOCO1-210ENST00000548263 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
CALCOCO1-210ENST00000548263 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
CALCOCO1-210ENST00000548263 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO1-210ENST00000548263 LRRC9Q6ZRR7 1453 aa12.71□□□□□ -0.38
CALCOCO1-210ENST00000548263 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 L3MBTL2Q969R5 705 aa12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
CALCOCO1-210ENST00000548263 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
CALCOCO1-210ENST00000548263 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
CALCOCO1-210ENST00000548263 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
CALCOCO1-210ENST00000548263 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
CALCOCO1-210ENST00000548263 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
CALCOCO1-210ENST00000548263 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-210ENST00000548263 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
CALCOCO1-210ENST00000548263 WDR62O43379 1518 aa12.65□□□□□ -0.39
CALCOCO1-210ENST00000548263 PKD2Q13563 968 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms