RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
TSPAN8-203ENST00000546561 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
TSPAN8-203ENST00000546561 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
TSPAN8-203ENST00000546561 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
TSPAN8-203ENST00000546561 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
TSPAN8-203ENST00000546561 NESP48681 1621 aa12.99□□□□□ -0.33
TSPAN8-203ENST00000546561 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
TSPAN8-203ENST00000546561 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
TSPAN8-203ENST00000546561 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
TSPAN8-203ENST00000546561 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
TSPAN8-203ENST00000546561 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
TSPAN8-203ENST00000546561 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.34
TSPAN8-203ENST00000546561 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
TSPAN8-203ENST00000546561 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
TSPAN8-203ENST00000546561 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
TSPAN8-203ENST00000546561 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
TSPAN8-203ENST00000546561 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
TSPAN8-203ENST00000546561 CUX1P39880 1505 aa12.91□□□□□ -0.34
TSPAN8-203ENST00000546561 EEA1Q15075 1411 aa12.85□□□□□ -0.35
TSPAN8-203ENST00000546561 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
TSPAN8-203ENST00000546561 TOPBP1Q92547 1522 aa12.83□□□□□ -0.35
TSPAN8-203ENST00000546561 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
TSPAN8-203ENST00000546561 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
TSPAN8-203ENST00000546561 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
TSPAN8-203ENST00000546561 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
TSPAN8-203ENST00000546561 CLCN6P51797 869 aa12.78□□□□□ -0.36
TSPAN8-203ENST00000546561 WDR62O43379 1518 aa12.78□□□□□ -0.36
TSPAN8-203ENST00000546561 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.37
TSPAN8-203ENST00000546561 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
TSPAN8-203ENST00000546561 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
TSPAN8-203ENST00000546561 SOGA1O94964 1423 aa12.74□□□□□ -0.37
TSPAN8-203ENST00000546561 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
TSPAN8-203ENST00000546561 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
TSPAN8-203ENST00000546561 FBLN2P98095 1184 aa12.73□□□□□ -0.37
TSPAN8-203ENST00000546561 FAM9AQ8IZU1 332 aaPredicted RBP12.72□□□□□ -0.37
TSPAN8-203ENST00000546561 ABCA10Q8WWZ4 1543 aa12.71□□□□□ -0.38
TSPAN8-203ENST00000546561 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
TSPAN8-203ENST00000546561 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
TSPAN8-203ENST00000546561 CUX2O14529 1486 aa12.7□□□□□ -0.38
TSPAN8-203ENST00000546561 KIF21BO75037 1637 aa12.7□□□□□ -0.38
TSPAN8-203ENST00000546561 POTEMA6NI47 508 aa12.69□□□□□ -0.38
TSPAN8-203ENST00000546561 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
TSPAN8-203ENST00000546561 RUSC2Q8N2Y8 1516 aa12.67□□□□□ -0.38
TSPAN8-203ENST00000546561 TARBP1Q13395 1621 aaKnown RBP12.67□□□□□ -0.38
TSPAN8-203ENST00000546561 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
TSPAN8-203ENST00000546561 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
TSPAN8-203ENST00000546561 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
TSPAN8-203ENST00000546561 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
TSPAN8-203ENST00000546561 CUL7Q14999 1698 aa12.64□□□□□ -0.39
TSPAN8-203ENST00000546561 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
TSPAN8-203ENST00000546561 PBRM1Q86U86 1689 aa12.62□□□□□ -0.39
TSPAN8-203ENST00000546561 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
TSPAN8-203ENST00000546561 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
TSPAN8-203ENST00000546561 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
TSPAN8-203ENST00000546561 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
TSPAN8-203ENST00000546561 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
TSPAN8-203ENST00000546561 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
TSPAN8-203ENST00000546561 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
TSPAN8-203ENST00000546561 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
TSPAN8-203ENST00000546561 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
TSPAN8-203ENST00000546561 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
TSPAN8-203ENST00000546561 IGF1RP08069 1367 aa12.54□□□□□ -0.4
TSPAN8-203ENST00000546561 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
TSPAN8-203ENST00000546561 TDRD9Q8NDG6 1382 aaKnown RBP12.53□□□□□ -0.4
TSPAN8-203ENST00000546561 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
TSPAN8-203ENST00000546561 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
TSPAN8-203ENST00000546561 CARMIL1Q5VZK9 1371 aa12.52□□□□□ -0.41
TSPAN8-203ENST00000546561 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
TSPAN8-203ENST00000546561 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
TSPAN8-203ENST00000546561 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
TSPAN8-203ENST00000546561 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
TSPAN8-203ENST00000546561 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
TSPAN8-203ENST00000546561 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.41
TSPAN8-203ENST00000546561 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.41
TSPAN8-203ENST00000546561 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
TSPAN8-203ENST00000546561 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
TSPAN8-203ENST00000546561 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
TSPAN8-203ENST00000546561 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
TSPAN8-203ENST00000546561 CLIP1P30622 1438 aa12.39□□□□□ -0.43
TSPAN8-203ENST00000546561 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
TSPAN8-203ENST00000546561 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
TSPAN8-203ENST00000546561 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
TSPAN8-203ENST00000546561 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
TSPAN8-203ENST00000546561 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
TSPAN8-203ENST00000546561 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
TSPAN8-203ENST00000546561 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
TSPAN8-203ENST00000546561 CHD1O14646 1710 aa12.33□□□□□ -0.44
TSPAN8-203ENST00000546561 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
TSPAN8-203ENST00000546561 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
TSPAN8-203ENST00000546561 SAMD9Q5K651 1589 aa12.29□□□□□ -0.44
TSPAN8-203ENST00000546561 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
TSPAN8-203ENST00000546561 KIAA0586Q9BVV6 1533 aa12.28□□□□□ -0.44
TSPAN8-203ENST00000546561 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
TSPAN8-203ENST00000546561 CEP170Q5SW79 1584 aa12.27□□□□□ -0.44
TSPAN8-203ENST00000546561 NUP160Q12769 1436 aa12.27□□□□□ -0.45
TSPAN8-203ENST00000546561 ARAP1Q96P48 1450 aa12.27□□□□□ -0.45
TSPAN8-203ENST00000546561 RANGAP1P46060 587 aaPredicted RBP12.26□□□□□ -0.45
TSPAN8-203ENST00000546561 UGGT2Q9NYU1 1516 aa12.25□□□□□ -0.45
TSPAN8-203ENST00000546561 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
TSPAN8-203ENST00000546561 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms