RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
DDB1-225ENST00000545930 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
DDB1-225ENST00000545930 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
DDB1-225ENST00000545930 CUX1P39880 1505 aa16.24■□□□□ 0.19
DDB1-225ENST00000545930 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
DDB1-225ENST00000545930 WDR62O43379 1518 aa16.23■□□□□ 0.19
DDB1-225ENST00000545930 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
DDB1-225ENST00000545930 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
DDB1-225ENST00000545930 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
DDB1-225ENST00000545930 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
DDB1-225ENST00000545930 SPDYE2Q495Y8 402 aa16.21■□□□□ 0.19
DDB1-225ENST00000545930 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
DDB1-225ENST00000545930 SOGA1O94964 1423 aa16.15■□□□□ 0.18
DDB1-225ENST00000545930 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
DDB1-225ENST00000545930 CUX2O14529 1486 aa16.13■□□□□ 0.17
DDB1-225ENST00000545930 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
DDB1-225ENST00000545930 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
DDB1-225ENST00000545930 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
DDB1-225ENST00000545930 RAD54L2Q9Y4B4 1467 aa16.05■□□□□ 0.16
DDB1-225ENST00000545930 PIP4P2Q8N4L2 257 aa16.04■□□□□ 0.16
DDB1-225ENST00000545930 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
DDB1-225ENST00000545930 EEA1Q15075 1411 aa16.02■□□□□ 0.16
DDB1-225ENST00000545930 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
DDB1-225ENST00000545930 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
DDB1-225ENST00000545930 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
DDB1-225ENST00000545930 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
DDB1-225ENST00000545930 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.152e-7■■■■□ 26.6
DDB1-225ENST00000545930 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
DDB1-225ENST00000545930 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
DDB1-225ENST00000545930 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
DDB1-225ENST00000545930 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
DDB1-225ENST00000545930 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.142e-7■■■■□ 20.8
DDB1-225ENST00000545930 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
DDB1-225ENST00000545930 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
DDB1-225ENST00000545930 FAM9AQ8IZU1 332 aaPredicted RBP15.9■□□□□ 0.14
DDB1-225ENST00000545930 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
DDB1-225ENST00000545930 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
DDB1-225ENST00000545930 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
DDB1-225ENST00000545930 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
DDB1-225ENST00000545930 IGF1RP08069 1367 aa15.88■□□□□ 0.13
DDB1-225ENST00000545930 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
DDB1-225ENST00000545930 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
DDB1-225ENST00000545930 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
DDB1-225ENST00000545930 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
DDB1-225ENST00000545930 MAGI1Q96QZ7 1491 aaPredicted RBP15.82■□□□□ 0.12
DDB1-225ENST00000545930 CUL7Q14999 1698 aa15.82■□□□□ 0.12
DDB1-225ENST00000545930 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
DDB1-225ENST00000545930 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
DDB1-225ENST00000545930 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
DDB1-225ENST00000545930 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
DDB1-225ENST00000545930 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
DDB1-225ENST00000545930 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
DDB1-225ENST00000545930 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
DDB1-225ENST00000545930 HAX1O00165 279 aa15.75■□□□□ 0.11
DDB1-225ENST00000545930 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
DDB1-225ENST00000545930 KIF21BO75037 1637 aa15.73■□□□□ 0.11
DDB1-225ENST00000545930 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
DDB1-225ENST00000545930 GOLGA3Q08378 1498 aa15.71■□□□□ 0.1
DDB1-225ENST00000545930 UBTFP17480 764 aaKnown RBP15.69■□□□□ 0.1
DDB1-225ENST00000545930 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
DDB1-225ENST00000545930 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
DDB1-225ENST00000545930 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
DDB1-225ENST00000545930 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
DDB1-225ENST00000545930 CHD1O14646 1710 aa15.6■□□□□ 0.09
DDB1-225ENST00000545930 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
DDB1-225ENST00000545930 NUP160Q12769 1436 aa15.57■□□□□ 0.08
DDB1-225ENST00000545930 KIAA0586Q9BVV6 1533 aa15.57■□□□□ 0.08
DDB1-225ENST00000545930 CTTNBP2Q8WZ74 1663 aa15.54■□□□□ 0.08
DDB1-225ENST00000545930 CEP170Q5SW79 1584 aa15.52■□□□□ 0.07
DDB1-225ENST00000545930 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
DDB1-225ENST00000545930 IQGAP2Q13576 1575 aa15.5■□□□□ 0.07
DDB1-225ENST00000545930 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
DDB1-225ENST00000545930 CARMIL2Q6F5E8 1435 aa15.45■□□□□ 0.06
DDB1-225ENST00000545930 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
DDB1-225ENST00000545930 UGGT2Q9NYU1 1516 aa15.43■□□□□ 0.06
DDB1-225ENST00000545930 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
DDB1-225ENST00000545930 CLIP1P30622 1438 aa15.43■□□□□ 0.06
DDB1-225ENST00000545930 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
DDB1-225ENST00000545930 EVX2Q03828 476 aa15.42■□□□□ 0.06
DDB1-225ENST00000545930 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
DDB1-225ENST00000545930 EFCAB5A4FU69 1503 aa15.41■□□□□ 0.06
DDB1-225ENST00000545930 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
DDB1-225ENST00000545930 PRG4Q92954 1404 aaPredicted RBP15.39■□□□□ 0.05
DDB1-225ENST00000545930 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
DDB1-225ENST00000545930 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
DDB1-225ENST00000545930 ARHGAP35Q9NRY4 1499 aa15.35■□□□□ 0.05
DDB1-225ENST00000545930 SAMD9Q5K651 1589 aa15.35■□□□□ 0.05
DDB1-225ENST00000545930 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
DDB1-225ENST00000545930 DISP1Q96F81 1524 aa15.33■□□□□ 0.04
DDB1-225ENST00000545930 KIAA0556O60303 1618 aa15.32■□□□□ 0.04
DDB1-225ENST00000545930 FMN1Q68DA7 1419 aa15.31■□□□□ 0.04
DDB1-225ENST00000545930 PTPRGP23470 1445 aa15.29■□□□□ 0.04
DDB1-225ENST00000545930 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
DDB1-225ENST00000545930 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
DDB1-225ENST00000545930 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
DDB1-225ENST00000545930 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
DDB1-225ENST00000545930 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
DDB1-225ENST00000545930 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
DDB1-225ENST00000545930 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
DDB1-225ENST00000545930 CLCN6P51797 869 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms