RNA–Protein interactions for RNA: ENST00000545625.5

RAB6A-210, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-210ENST00000545625 HAX1O00165 279 aa11.5□□□□□ -0.57
RAB6A-210ENST00000545625 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
RAB6A-210ENST00000545625 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
RAB6A-210ENST00000545625 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
RAB6A-210ENST00000545625 SPDYE4A6NLX3 237 aa11.43□□□□□ -0.58
RAB6A-210ENST00000545625 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
RAB6A-210ENST00000545625 FAM9AQ8IZU1 332 aaPredicted RBP11.43□□□□□ -0.58
RAB6A-210ENST00000545625 CFTRP13569 1480 aa11.41□□□□□ -0.58
RAB6A-210ENST00000545625 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
RAB6A-210ENST00000545625 WRNQ14191 1432 aaPredicted RBP eCLIP11.38□□□□□ -0.59
RAB6A-210ENST00000545625 EVX2Q03828 476 aa11.38□□□□□ -0.59
RAB6A-210ENST00000545625 NESP48681 1621 aa11.35□□□□□ -0.59
RAB6A-210ENST00000545625 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
RAB6A-210ENST00000545625 FANCD2Q9BXW9 1451 aa11.32□□□□□ -0.6
RAB6A-210ENST00000545625 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
RAB6A-210ENST00000545625 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
RAB6A-210ENST00000545625 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
RAB6A-210ENST00000545625 LOC105371045A0A1W2PR82 267 aa11.26□□□□□ -0.61
RAB6A-210ENST00000545625 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
RAB6A-210ENST00000545625 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
RAB6A-210ENST00000545625 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
RAB6A-210ENST00000545625 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
RAB6A-210ENST00000545625 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
RAB6A-210ENST00000545625 CUX1P39880 1505 aa11.21□□□□□ -0.61
RAB6A-210ENST00000545625 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
RAB6A-210ENST00000545625 SOGA1O94964 1423 aa11.2□□□□□ -0.62
RAB6A-210ENST00000545625 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
RAB6A-210ENST00000545625 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
RAB6A-210ENST00000545625 EEA1Q15075 1411 aa11.17□□□□□ -0.62
RAB6A-210ENST00000545625 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
RAB6A-210ENST00000545625 TOPBP1Q92547 1522 aa11.15□□□□□ -0.62
RAB6A-210ENST00000545625 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
RAB6A-210ENST00000545625 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
RAB6A-210ENST00000545625 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
RAB6A-210ENST00000545625 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
RAB6A-210ENST00000545625 KIF27Q86VH2 1401 aa11.14□□□□□ -0.63
RAB6A-210ENST00000545625 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
RAB6A-210ENST00000545625 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
RAB6A-210ENST00000545625 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
RAB6A-210ENST00000545625 PROM2Q8N271 834 aa11.11□□□□□ -0.63
RAB6A-210ENST00000545625 CUX2O14529 1486 aa11.11□□□□□ -0.63
RAB6A-210ENST00000545625 GABBR2O75899 941 aa11.1□□□□□ -0.63
RAB6A-210ENST00000545625 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
RAB6A-210ENST00000545625 POLA1P09884 1462 aaPredicted RBP11.08□□□□□ -0.64
RAB6A-210ENST00000545625 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
RAB6A-210ENST00000545625 TDRD9Q8NDG6 1382 aaKnown RBP11.05□□□□□ -0.64
RAB6A-210ENST00000545625 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
RAB6A-210ENST00000545625 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
RAB6A-210ENST00000545625 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
RAB6A-210ENST00000545625 IGF1RP08069 1367 aa11.01□□□□□ -0.65
RAB6A-210ENST00000545625 WDR62O43379 1518 aa11□□□□□ -0.65
RAB6A-210ENST00000545625 FKBP8Q14318 412 aa11□□□□□ -0.65
RAB6A-210ENST00000545625 CARMIL1Q5VZK9 1371 aa11□□□□□ -0.65
RAB6A-210ENST00000545625 IFT140Q96RY7 1462 aa11□□□□□ -0.65
RAB6A-210ENST00000545625 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
RAB6A-210ENST00000545625 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
RAB6A-210ENST00000545625 TNIKQ9UKE5 1360 aa10.97□□□□□ -0.65
RAB6A-210ENST00000545625 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.65
RAB6A-210ENST00000545625 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
RAB6A-210ENST00000545625 THOC2Q8NI27 1593 aaKnown RBP10.95□□□□□ -0.66
RAB6A-210ENST00000545625 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
RAB6A-210ENST00000545625 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
RAB6A-210ENST00000545625 KIF21BO75037 1637 aa10.94□□□□□ -0.66
RAB6A-210ENST00000545625 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
RAB6A-210ENST00000545625 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
RAB6A-210ENST00000545625 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
RAB6A-210ENST00000545625 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
RAB6A-210ENST00000545625 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
RAB6A-210ENST00000545625 MIER1Q8N108 512 aa10.91□□□□□ -0.66
RAB6A-210ENST00000545625 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
RAB6A-210ENST00000545625 CEP162Q5TB80 1403 aa10.9□□□□□ -0.66
RAB6A-210ENST00000545625 ERICH3Q5RHP9 1530 aa10.89□□□□□ -0.67
RAB6A-210ENST00000545625 PHF12Q96QT6 1004 aa10.89□□□□□ -0.67
RAB6A-210ENST00000545625 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
RAB6A-210ENST00000545625 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
RAB6A-210ENST00000545625 CLCN6P51797 869 aa10.87□□□□□ -0.67
RAB6A-210ENST00000545625 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
RAB6A-210ENST00000545625 CUL7Q14999 1698 aa10.86□□□□□ -0.67
RAB6A-210ENST00000545625 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
RAB6A-210ENST00000545625 CLIP1P30622 1438 aa10.86□□□□□ -0.67
RAB6A-210ENST00000545625 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
RAB6A-210ENST00000545625 P3H3Q8IVL6 736 aa10.85□□□□□ -0.67
RAB6A-210ENST00000545625 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
RAB6A-210ENST00000545625 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
RAB6A-210ENST00000545625 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
RAB6A-210ENST00000545625 SNAPC4Q5SXM2 1469 aa10.83□□□□□ -0.68
RAB6A-210ENST00000545625 PPARGC1BQ86YN6 1023 aaKnown RBP10.83□□□□□ -0.68
RAB6A-210ENST00000545625 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
RAB6A-210ENST00000545625 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
RAB6A-210ENST00000545625 TSPYL2Q9H2G4 693 aaPredicted RBP10.83□□□□□ -0.68
RAB6A-210ENST00000545625 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
RAB6A-210ENST00000545625 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
RAB6A-210ENST00000545625 MAGI1Q96QZ7 1491 aaPredicted RBP10.79□□□□□ -0.68
RAB6A-210ENST00000545625 ADAMTS12P58397 1594 aa10.77□□□□□ -0.69
RAB6A-210ENST00000545625 SYNJ2O15056 1496 aa10.76□□□□□ -0.69
RAB6A-210ENST00000545625 LHX8Q68G74 356 aa10.75□□□□□ -0.69
RAB6A-210ENST00000545625 GRIN2AQ12879 1464 aa10.74□□□□□ -0.69
RAB6A-210ENST00000545625 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
RAB6A-210ENST00000545625 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
RAB6A-210ENST00000545625 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms