RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 SOGA1O94964 1423 aa8.86□□□□□ -0.99
NPIPB3-214ENST00000545358 AKT1S1Q96B36 256 aa8.85□□□□□ -0.99
NPIPB3-214ENST00000545358 KIF21BO75037 1637 aa8.84□□□□□ -0.99
NPIPB3-214ENST00000545358 DNMBPQ6XZF7 1577 aa8.84□□□□□ -0.99
NPIPB3-214ENST00000545358 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
NPIPB3-214ENST00000545358 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
NPIPB3-214ENST00000545358 CEP164Q9UPV0 1460 aa8.83□□□□□ -1
NPIPB3-214ENST00000545358 NESP48681 1621 aa8.82□□□□□ -1
NPIPB3-214ENST00000545358 PDS5BQ9NTI5 1447 aa8.81□□□□□ -1
NPIPB3-214ENST00000545358 GOLGA3Q08378 1498 aa8.81□□□□□ -1
NPIPB3-214ENST00000545358 RUSC2Q8N2Y8 1516 aa8.8□□□□□ -1
NPIPB3-214ENST00000545358 FGD5Q6ZNL6 1462 aa8.79□□□□□ -1
NPIPB3-214ENST00000545358 TOPBP1Q92547 1522 aa8.79□□□□□ -1
NPIPB3-214ENST00000545358 ERICH3Q5RHP9 1530 aa8.78□□□□□ -1
NPIPB3-214ENST00000545358 KIF27Q86VH2 1401 aa8.78□□□□□ -1
NPIPB3-214ENST00000545358 KIF21AQ7Z4S6 1674 aa8.78□□□□□ -1
NPIPB3-214ENST00000545358 TNIKQ9UKE5 1360 aa8.76□□□□□ -1.01
NPIPB3-214ENST00000545358 URB2Q14146 1524 aaKnown RBP8.75□□□□□ -1.01
NPIPB3-214ENST00000545358 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
NPIPB3-214ENST00000545358 WDR97A6NE52 1622 aa8.75□□□□□ -1.01
NPIPB3-214ENST00000545358 ABCA10Q8WWZ4 1543 aa8.75□□□□□ -1.01
NPIPB3-214ENST00000545358 SSUH2Q9Y2M2 353 aa8.74□□□□□ -1.01
NPIPB3-214ENST00000545358 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-214ENST00000545358 PRXQ9BXM0 1461 aa8.74□□□□□ -1.01
NPIPB3-214ENST00000545358 CUX2O14529 1486 aa8.73□□□□□ -1.01
NPIPB3-214ENST00000545358 MRC2Q9UBG0 1479 aa8.72□□□□□ -1.01
NPIPB3-214ENST00000545358 CEP162Q5TB80 1403 aa8.71□□□□□ -1.01
NPIPB3-214ENST00000545358 REM2Q8IYK8 340 aaPredicted RBP8.71□□□□□ -1.02
NPIPB3-214ENST00000545358 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
NPIPB3-214ENST00000545358 CUL7Q14999 1698 aa8.69□□□□□ -1.02
NPIPB3-214ENST00000545358 WDR62O43379 1518 aa8.69□□□□□ -1.02
NPIPB3-214ENST00000545358 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
NPIPB3-214ENST00000545358 RAD54L2Q9Y4B4 1467 aa8.67□□□□□ -1.02
NPIPB3-214ENST00000545358 TARBP1Q13395 1621 aaKnown RBP8.66□□□□□ -1.02
NPIPB3-214ENST00000545358 THOC2Q8NI27 1593 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-214ENST00000545358 IGF1RP08069 1367 aa8.65□□□□□ -1.02
NPIPB3-214ENST00000545358 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-214ENST00000545358 CHRDL2Q6WN34 429 aa8.65□□□□□ -1.02
NPIPB3-214ENST00000545358 SPDYE4A6NLX3 237 aa8.64□□□□□ -1.03
NPIPB3-214ENST00000545358 SPDYE1Q8NFV5 336 aaPredicted RBP8.64□□□□□ -1.03
NPIPB3-214ENST00000545358 ERCC6Q03468 1493 aa8.64□□□□□ -1.03
NPIPB3-214ENST00000545358 CLIP1P30622 1438 aa8.63□□□□□ -1.03
NPIPB3-214ENST00000545358 CARMIL1Q5VZK9 1371 aa8.62□□□□□ -1.03
NPIPB3-214ENST00000545358 IFT140Q96RY7 1462 aa8.62□□□□□ -1.03
NPIPB3-214ENST00000545358 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
NPIPB3-214ENST00000545358 GAPVD1Q14C86 1478 aa8.61□□□□□ -1.03
NPIPB3-214ENST00000545358 PITPNM1O00562 1244 aa8.59□□□□□ -1.03
NPIPB3-214ENST00000545358 VPS8Q8N3P4 1428 aa8.59□□□□□ -1.03
NPIPB3-214ENST00000545358 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
NPIPB3-214ENST00000545358 ADAMTS12P58397 1594 aa8.57□□□□□ -1.04
NPIPB3-214ENST00000545358 ARAP1Q96P48 1450 aa8.57□□□□□ -1.04
NPIPB3-214ENST00000545358 POTEHQ6S545 545 aa8.56□□□□□ -1.04
NPIPB3-214ENST00000545358 GRIN2BQ13224 1484 aa8.56□□□□□ -1.04
NPIPB3-214ENST00000545358 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
NPIPB3-214ENST00000545358 EFCAB5A4FU69 1503 aa8.55□□□□□ -1.04
NPIPB3-214ENST00000545358 TRIM26Q12899 539 aaPredicted RBP8.55□□□□□ -1.04
NPIPB3-214ENST00000545358 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
NPIPB3-214ENST00000545358 ARHGAP35Q9NRY4 1499 aa8.54□□□□□ -1.04
NPIPB3-214ENST00000545358 STAG3Q9UJ98 1225 aa8.54□□□□□ -1.04
NPIPB3-214ENST00000545358 FHAD1B1AJZ9 1412 aa8.54□□□□□ -1.04
NPIPB3-214ENST00000545358 CLEC11AQ9Y240 323 aa8.53□□□□□ -1.04
NPIPB3-214ENST00000545358 ZNF608Q9ULD9 1512 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-214ENST00000545358 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPIPB3-214ENST00000545358 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-214ENST00000545358 SAMD9Q5K651 1589 aa8.5□□□□□ -1.05
NPIPB3-214ENST00000545358 PCGF6Q9BYE7 350 aa8.5□□□□□ -1.05
NPIPB3-214ENST00000545358 FXR2P51116 673 aaKnown RBP eCLIP8.49□□□□□ -1.05
NPIPB3-214ENST00000545358 PROM2Q8N271 834 aa8.49□□□□□ -1.05
NPIPB3-214ENST00000545358 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
NPIPB3-214ENST00000545358 PRR29P0C7W0 189 aa8.47□□□□□ -1.05
NPIPB3-214ENST00000545358 PIP4P2Q8N4L2 257 aa8.47□□□□□ -1.05
NPIPB3-214ENST00000545358 MAP3K1Q13233 1512 aa8.47□□□□□ -1.05
NPIPB3-214ENST00000545358 IQGAP2Q13576 1575 aa8.47□□□□□ -1.05
NPIPB3-214ENST00000545358 FKBP8Q14318 412 aa8.46□□□□□ -1.06
NPIPB3-214ENST00000545358 CFAP43Q8NDM7 1665 aa8.46□□□□□ -1.06
NPIPB3-214ENST00000545358 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
NPIPB3-214ENST00000545358 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
NPIPB3-214ENST00000545358 PCF11O94913 1555 aaKnown RBP8.45□□□□□ -1.06
NPIPB3-214ENST00000545358 FYCO1Q9BQS8 1478 aa8.45□□□□□ -1.06
NPIPB3-214ENST00000545358 UGGT2Q9NYU1 1516 aa8.44□□□□□ -1.06
NPIPB3-214ENST00000545358 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-214ENST00000545358 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
NPIPB3-214ENST00000545358 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
NPIPB3-214ENST00000545358 FHOD3Q2V2M9 1422 aa8.42□□□□□ -1.06
NPIPB3-214ENST00000545358 KIAA0586Q9BVV6 1533 aa8.42□□□□□ -1.06
NPIPB3-214ENST00000545358 CASKIN1Q8WXD9 1431 aa8.41□□□□□ -1.06
NPIPB3-214ENST00000545358 CEP170Q5SW79 1584 aa8.4□□□□□ -1.06
NPIPB3-214ENST00000545358 NUP160Q12769 1436 aa8.4□□□□□ -1.06
NPIPB3-214ENST00000545358 KIAA0556O60303 1618 aa8.4□□□□□ -1.07
NPIPB3-214ENST00000545358 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-214ENST00000545358 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-214ENST00000545358 HECW1Q76N89 1606 aa8.38□□□□□ -1.07
NPIPB3-214ENST00000545358 LRRC9Q6ZRR7 1453 aa8.37□□□□□ -1.07
NPIPB3-214ENST00000545358 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
NPIPB3-214ENST00000545358 HRCP23327 699 aa8.35□□□□□ -1.07
NPIPB3-214ENST00000545358 RRBP1Q9P2E9 1410 aaKnown RBP8.35□□□□□ -1.07
NPIPB3-214ENST00000545358 CHD1O14646 1710 aa8.34□□□□□ -1.07
NPIPB3-214ENST00000545358 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
NPIPB3-214ENST00000545358 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
NPIPB3-214ENST00000545358 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms