RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
SPARCL1-209ENST00000541496 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
SPARCL1-209ENST00000541496 PIP4P2Q8N4L2 257 aa8.54□□□□□ -1.04
SPARCL1-209ENST00000541496 MRC2Q9UBG0 1479 aa8.53□□□□□ -1.04
SPARCL1-209ENST00000541496 WRNQ14191 1432 aaPredicted RBP eCLIP8.53□□□□□ -1.04
SPARCL1-209ENST00000541496 ABCC8Q09428 1581 aa8.52□□□□□ -1.04
SPARCL1-209ENST00000541496 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
SPARCL1-209ENST00000541496 URB2Q14146 1524 aaKnown RBP8.5□□□□□ -1.05
SPARCL1-209ENST00000541496 WDR62O43379 1518 aa8.49□□□□□ -1.05
SPARCL1-209ENST00000541496 TOPBP1Q92547 1522 aa8.49□□□□□ -1.05
SPARCL1-209ENST00000541496 CUX1P39880 1505 aa8.48□□□□□ -1.05
SPARCL1-209ENST00000541496 DNMBPQ6XZF7 1577 aa8.48□□□□□ -1.05
SPARCL1-209ENST00000541496 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
SPARCL1-209ENST00000541496 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
SPARCL1-209ENST00000541496 THOC2Q8NI27 1593 aaKnown RBP8.47□□□□□ -1.05
SPARCL1-209ENST00000541496 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.06
SPARCL1-209ENST00000541496 CUX2O14529 1486 aa8.45□□□□□ -1.06
SPARCL1-209ENST00000541496 FXR2P51116 673 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPARCL1-209ENST00000541496 SPDYE1Q8NFV5 336 aaPredicted RBP8.45□□□□□ -1.06
SPARCL1-209ENST00000541496 POLA1P09884 1462 aaPredicted RBP8.44□□□□□ -1.06
SPARCL1-209ENST00000541496 TOP2BQ02880 1626 aa8.43□□□□□ -1.06
SPARCL1-209ENST00000541496 HAX1O00165 279 aa8.43□□□□□ -1.06
SPARCL1-209ENST00000541496 TRIM41Q8WV44 630 aa8.43□□□□□ -1.06
SPARCL1-209ENST00000541496 SYNJ1O43426 1573 aa8.43□□□□□ -1.06
SPARCL1-209ENST00000541496 FGD5Q6ZNL6 1462 aa8.42□□□□□ -1.06
SPARCL1-209ENST00000541496 IFT140Q96RY7 1462 aa8.41□□□□□ -1.06
SPARCL1-209ENST00000541496 SOGA1O94964 1423 aa8.41□□□□□ -1.06
SPARCL1-209ENST00000541496 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.06
SPARCL1-209ENST00000541496 SP7Q8TDD2 431 aaPredicted RBP8.4□□□□□ -1.06
SPARCL1-209ENST00000541496 ABCA10Q8WWZ4 1543 aa8.38□□□□□ -1.07
SPARCL1-209ENST00000541496 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
SPARCL1-209ENST00000541496 PRKAR2AP13861 404 aaKnown RBP8.37□□□□□ -1.07
SPARCL1-209ENST00000541496 FKBP8Q14318 412 aa8.37□□□□□ -1.07
SPARCL1-209ENST00000541496 STAG3Q9UJ98 1225 aa8.37□□□□□ -1.07
SPARCL1-209ENST00000541496 PROM2Q8N271 834 aa8.36□□□□□ -1.07
SPARCL1-209ENST00000541496 TARBP1Q13395 1621 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-209ENST00000541496 KIF27Q86VH2 1401 aa8.34□□□□□ -1.07
SPARCL1-209ENST00000541496 TDRD9Q8NDG6 1382 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-209ENST00000541496 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
SPARCL1-209ENST00000541496 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
SPARCL1-209ENST00000541496 EEA1Q15075 1411 aa8.32□□□□□ -1.08
SPARCL1-209ENST00000541496 AQRO60306 1485 aaKnown RBP eCLIP8.31□□□□□ -1.08
SPARCL1-209ENST00000541496 GAPVD1Q14C86 1478 aa8.31□□□□□ -1.08
SPARCL1-209ENST00000541496 PRR29P0C7W0 189 aa8.3□□□□□ -1.08
SPARCL1-209ENST00000541496 IGF1RP08069 1367 aa8.3□□□□□ -1.08
SPARCL1-209ENST00000541496 GRIN2BQ13224 1484 aa8.3□□□□□ -1.08
SPARCL1-209ENST00000541496 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
SPARCL1-209ENST00000541496 EVX2Q03828 476 aa8.28□□□□□ -1.08
SPARCL1-209ENST00000541496 ABCA5Q8WWZ7 1642 aa8.28□□□□□ -1.08
SPARCL1-209ENST00000541496 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
SPARCL1-209ENST00000541496 RUSC2Q8N2Y8 1516 aa8.26□□□□□ -1.09
SPARCL1-209ENST00000541496 EIF4G3O43432 1585 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-209ENST00000541496 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
SPARCL1-209ENST00000541496 FHAD1B1AJZ9 1412 aa8.24□□□□□ -1.09
SPARCL1-209ENST00000541496 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
SPARCL1-209ENST00000541496 CARMIL1Q5VZK9 1371 aa8.23□□□□□ -1.09
SPARCL1-209ENST00000541496 SNAPC4Q5SXM2 1469 aa8.23□□□□□ -1.09
SPARCL1-209ENST00000541496 SYNJ2O15056 1496 aa8.22□□□□□ -1.09
SPARCL1-209ENST00000541496 FBXO3Q9UK99 471 aa8.21□□□□□ -1.1
SPARCL1-209ENST00000541496 FAM9AQ8IZU1 332 aaPredicted RBP8.2□□□□□ -1.1
SPARCL1-209ENST00000541496 CHMP7Q8WUX9 453 aaPredicted RBP8.2□□□□□ -1.1
SPARCL1-209ENST00000541496 RAPGEF2Q9Y4G8 1499 aa8.19□□□□□ -1.1
SPARCL1-209ENST00000541496 C19orf67A6NJJ6 358 aa8.19□□□□□ -1.1
SPARCL1-209ENST00000541496 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
SPARCL1-209ENST00000541496 GRIN2AQ12879 1464 aa8.18□□□□□ -1.1
SPARCL1-209ENST00000541496 NUP160Q12769 1436 aa8.17□□□□□ -1.1
SPARCL1-209ENST00000541496 CUL7Q14999 1698 aa8.17□□□□□ -1.1
SPARCL1-209ENST00000541496 PLEKHG5O94827 1062 aa8.15□□□□□ -1.1
SPARCL1-209ENST00000541496 PBRM1Q86U86 1689 aa8.14□□□□□ -1.11
SPARCL1-209ENST00000541496 GOLGA3Q08378 1498 aa8.14□□□□□ -1.11
SPARCL1-209ENST00000541496 FARP1Q9Y4F1 1045 aaPredicted RBP8.14□□□□□ -1.11
SPARCL1-209ENST00000541496 KIF21BO75037 1637 aa8.14□□□□□ -1.11
SPARCL1-209ENST00000541496 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
SPARCL1-209ENST00000541496 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
SPARCL1-209ENST00000541496 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
SPARCL1-209ENST00000541496 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
SPARCL1-209ENST00000541496 GABBR2O75899 941 aa8.09□□□□□ -1.11
SPARCL1-209ENST00000541496 UBTFP17480 764 aaKnown RBP8.09□□□□□ -1.11
SPARCL1-209ENST00000541496 CEP170Q5SW79 1584 aa8.09□□□□□ -1.11
SPARCL1-209ENST00000541496 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
SPARCL1-209ENST00000541496 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
SPARCL1-209ENST00000541496 CLASP1Q7Z460 1538 aa8.08□□□□□ -1.12
SPARCL1-209ENST00000541496 LOC105371045A0A1W2PR82 267 aa8.07□□□□□ -1.12
SPARCL1-209ENST00000541496 NPM1P06748 294 aaKnown RBP eCLIP8.07□□□□□ -1.12
SPARCL1-209ENST00000541496 MIER1Q8N108 512 aa8.07□□□□□ -1.12
SPARCL1-209ENST00000541496 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
SPARCL1-209ENST00000541496 UGGT2Q9NYU1 1516 aa8.05□□□□□ -1.12
SPARCL1-209ENST00000541496 IQGAP2Q13576 1575 aa8.04□□□□□ -1.12
SPARCL1-209ENST00000541496 CHD1O14646 1710 aa8.03□□□□□ -1.12
SPARCL1-209ENST00000541496 VASPP50552 380 aaPredicted RBP8.03□□□□□ -1.12
SPARCL1-209ENST00000541496 PRG4Q92954 1404 aaPredicted RBP8.03□□□□□ -1.12
SPARCL1-209ENST00000541496 CARMIL2Q6F5E8 1435 aa8.02□□□□□ -1.13
SPARCL1-209ENST00000541496 SHROOM2Q13796 1616 aa8.01□□□□□ -1.13
SPARCL1-209ENST00000541496 MNX1P50219 401 aaPredicted RBP8.01□□□□□ -1.13
SPARCL1-209ENST00000541496 DISP1Q96F81 1524 aa8.01□□□□□ -1.13
SPARCL1-209ENST00000541496 CLIP1P30622 1438 aa8.01□□□□□ -1.13
SPARCL1-209ENST00000541496 CEP162Q5TB80 1403 aa8.01□□□□□ -1.13
SPARCL1-209ENST00000541496 EFCAB5A4FU69 1503 aa8□□□□□ -1.13
SPARCL1-209ENST00000541496 DNAJC5Q9H3Z4 198 aa8□□□□□ -1.13
SPARCL1-209ENST00000541496 ZRANB1Q9UGI0 708 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms