RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
SPARCL1-209ENST00000541496 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
SPARCL1-209ENST00000541496 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
SPARCL1-209ENST00000541496 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
SPARCL1-209ENST00000541496 FOXD1Q16676 465 aa12.51□□□□□ -0.41
SPARCL1-209ENST00000541496 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
SPARCL1-209ENST00000541496 NISCHQ9Y2I1 1504 aa11.76□□□□□ -0.53
SPARCL1-209ENST00000541496 PIAS4Q8N2W9 510 aaPredicted RBP11.74□□□□□ -0.53
SPARCL1-209ENST00000541496 MSH5O43196 834 aa11.71□□□□□ -0.53
SPARCL1-209ENST00000541496 PPP6R1Q9UPN7 881 aa11.7□□□□□ -0.54
SPARCL1-209ENST00000541496 ADRA2BP18089 450 aa11.69□□□□□ -0.54
SPARCL1-209ENST00000541496 POTEDQ86YR6 584 aa11.42□□□□□ -0.58
SPARCL1-209ENST00000541496 MAPK8IP2Q13387 824 aaPredicted RBP10.74□□□□□ -0.69
SPARCL1-209ENST00000541496 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.69
SPARCL1-209ENST00000541496 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
SPARCL1-209ENST00000541496 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
SPARCL1-209ENST00000541496 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.74
SPARCL1-209ENST00000541496 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
SPARCL1-209ENST00000541496 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
SPARCL1-209ENST00000541496 CCDC180Q9P1Z9 1646 aa10.31□□□□□ -0.76
SPARCL1-209ENST00000541496 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
SPARCL1-209ENST00000541496 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
SPARCL1-209ENST00000541496 KCNA4P22459 653 aa10.2□□□□□ -0.78
SPARCL1-209ENST00000541496 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
SPARCL1-209ENST00000541496 CACNB1Q02641 598 aaPredicted RBP10.09□□□□□ -0.79
SPARCL1-209ENST00000541496 DNAJC5BQ9UF47 199 aa9.99□□□□□ -0.81
SPARCL1-209ENST00000541496 RNF39Q9H2S5 420 aa9.98□□□□□ -0.81
SPARCL1-209ENST00000541496 ABCC9O60706 1549 aa9.95□□□□□ -0.82
SPARCL1-209ENST00000541496 ZCCHC6Q5VYS8 1495 aaKnown RBP9.85□□□□□ -0.83
SPARCL1-209ENST00000541496 C1QBPQ07021 282 aaKnown RBP9.84□□□□□ -0.83
SPARCL1-209ENST00000541496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.83□□□□□ -0.84
SPARCL1-209ENST00000541496 DCAF1Q9Y4B6 1507 aa9.78□□□□□ -0.84
SPARCL1-209ENST00000541496 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.84
SPARCL1-209ENST00000541496 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
SPARCL1-209ENST00000541496 NACADO15069 1562 aa9.71□□□□□ -0.85
SPARCL1-209ENST00000541496 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
SPARCL1-209ENST00000541496 RB1CC1Q8TDY2 1594 aa9.65□□□□□ -0.86
SPARCL1-209ENST00000541496 SLC4A2P04920 1241 aa9.58□□□□□ -0.88
SPARCL1-209ENST00000541496 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
SPARCL1-209ENST00000541496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.49□□□□□ -0.89
SPARCL1-209ENST00000541496 HNRNPUL2Q1KMD3 747 aaKnown RBP9.49□□□□□ -0.89
SPARCL1-209ENST00000541496 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
SPARCL1-209ENST00000541496 CAPN15O75808 1086 aa9.47□□□□□ -0.89
SPARCL1-209ENST00000541496 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.9
SPARCL1-209ENST00000541496 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
SPARCL1-209ENST00000541496 APLP2Q06481 763 aa9.44□□□□□ -0.9
SPARCL1-209ENST00000541496 SAMD1Q6SPF0 538 aaPredicted RBP9.41□□□□□ -0.9
SPARCL1-209ENST00000541496 SCRIBQ14160 1630 aa9.4□□□□□ -0.9
SPARCL1-209ENST00000541496 SHROOM4Q9ULL8 1493 aa9.35□□□□□ -0.91
SPARCL1-209ENST00000541496 DSG3P32926 999 aa9.35□□□□□ -0.91
SPARCL1-209ENST00000541496 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SPARCL1-209ENST00000541496 BICRAQ9NZM4 1560 aa9.35□□□□□ -0.91
SPARCL1-209ENST00000541496 ZBTB22O15209 634 aa9.34□□□□□ -0.91
SPARCL1-209ENST00000541496 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
SPARCL1-209ENST00000541496 UNC13AQ9UPW8 1703 aa9.26□□□□□ -0.93
SPARCL1-209ENST00000541496 ABCB7O75027 752 aa9.26□□□□□ -0.93
SPARCL1-209ENST00000541496 EHMT2Q96KQ7 1210 aa9.26□□□□□ -0.93
SPARCL1-209ENST00000541496 ZNF219Q9P2Y4 722 aaPredicted RBP9.26□□□□□ -0.93
SPARCL1-209ENST00000541496 ATXN8OSP0DMR3 200 aa9.23□□□□□ -0.93
SPARCL1-209ENST00000541496 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
SPARCL1-209ENST00000541496 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
SPARCL1-209ENST00000541496 EIF4G1Q04637 1599 aaKnown RBP9.09□□□□□ -0.95
SPARCL1-209ENST00000541496 BAZ1AQ9NRL2 1556 aaPredicted RBP9.09□□□□□ -0.95
SPARCL1-209ENST00000541496 POLA2Q14181 598 aa9.06□□□□□ -0.96
SPARCL1-209ENST00000541496 ATF5Q9Y2D1 282 aaPredicted RBP9.06□□□□□ -0.96
SPARCL1-209ENST00000541496 RSF1Q96T23 1441 aaPredicted RBP9.05□□□□□ -0.96
SPARCL1-209ENST00000541496 MROH2BQ7Z745 1585 aa9.05□□□□□ -0.96
SPARCL1-209ENST00000541496 SMARCA4P51532 1647 aa9.04□□□□□ -0.96
SPARCL1-209ENST00000541496 NCAPD3P42695 1498 aa9.01□□□□□ -0.97
SPARCL1-209ENST00000541496 ATAD2BQ9ULI0 1458 aa9.01□□□□□ -0.97
SPARCL1-209ENST00000541496 PEG3Q9GZU2 1588 aa9□□□□□ -0.97
SPARCL1-209ENST00000541496 SMARCA2P51531 1590 aa8.99□□□□□ -0.97
SPARCL1-209ENST00000541496 ZBTB12Q9Y330 459 aaPredicted RBP8.98□□□□□ -0.97
SPARCL1-209ENST00000541496 CC2D2AQ9P2K1 1620 aa8.98□□□□□ -0.97
SPARCL1-209ENST00000541496 POTEHQ6S545 545 aa8.96□□□□□ -0.98
SPARCL1-209ENST00000541496 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
SPARCL1-209ENST00000541496 HMGXB3Q12766 1538 aa8.94□□□□□ -0.98
SPARCL1-209ENST00000541496 BAZ1BQ9UIG0 1483 aaKnown RBP8.92□□□□□ -0.98
SPARCL1-209ENST00000541496 SUPT5HO00267 1087 aaKnown RBP8.9□□□□□ -0.98
SPARCL1-209ENST00000541496 WIZO95785 1651 aa8.88□□□□□ -0.99
SPARCL1-209ENST00000541496 TOP2AP11388 1531 aaKnown RBP8.88□□□□□ -0.99
SPARCL1-209ENST00000541496 FBLN2P98095 1184 aa8.84□□□□□ -0.99
SPARCL1-209ENST00000541496 CCDC88BA6NC98 1476 aa8.78□□□□□ -1
SPARCL1-209ENST00000541496 OSCARQ8IYS5 282 aa8.77□□□□□ -1.01
SPARCL1-209ENST00000541496 CHRDL2Q6WN34 429 aa8.76□□□□□ -1.01
SPARCL1-209ENST00000541496 CADPSQ9ULU8 1353 aa8.74□□□□□ -1.01
SPARCL1-209ENST00000541496 CFTRP13569 1480 aa8.73□□□□□ -1.01
SPARCL1-209ENST00000541496 AKT1S1Q96B36 256 aa8.72□□□□□ -1.01
SPARCL1-209ENST00000541496 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
SPARCL1-209ENST00000541496 SPDYE2BA6NHP3 402 aa8.67□□□□□ -1.02
SPARCL1-209ENST00000541496 SPDYE6P0CI01 402 aa8.67□□□□□ -1.02
SPARCL1-209ENST00000541496 SPDYE2Q495Y8 402 aa8.67□□□□□ -1.02
SPARCL1-209ENST00000541496 LAMC3Q9Y6N6 1575 aa8.67□□□□□ -1.02
SPARCL1-209ENST00000541496 PDS5BQ9NTI5 1447 aa8.66□□□□□ -1.02
SPARCL1-209ENST00000541496 REM2Q8IYK8 340 aaPredicted RBP8.66□□□□□ -1.02
SPARCL1-209ENST00000541496 NESP48681 1621 aa8.65□□□□□ -1.02
SPARCL1-209ENST00000541496 FANCD2Q9BXW9 1451 aa8.61□□□□□ -1.03
SPARCL1-209ENST00000541496 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
SPARCL1-209ENST00000541496 PITPNM1O00562 1244 aa8.57□□□□□ -1.04
SPARCL1-209ENST00000541496 ZNF692Q9BU19 519 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms