RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
INO80E-203ENST00000540562 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
INO80E-203ENST00000540562 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
INO80E-203ENST00000540562 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
INO80E-203ENST00000540562 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
INO80E-203ENST00000540562 NESP48681 1621 aa20.28■□□□□ 0.84
INO80E-203ENST00000540562 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
INO80E-203ENST00000540562 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
INO80E-203ENST00000540562 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
INO80E-203ENST00000540562 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
INO80E-203ENST00000540562 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
INO80E-203ENST00000540562 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
INO80E-203ENST00000540562 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
INO80E-203ENST00000540562 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
INO80E-203ENST00000540562 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
INO80E-203ENST00000540562 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
INO80E-203ENST00000540562 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
INO80E-203ENST00000540562 MAPKBP1O60336 1514 aa20.14■□□□□ 0.82
INO80E-203ENST00000540562 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
INO80E-203ENST00000540562 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
INO80E-203ENST00000540562 FKBP8Q14318 412 aa20.11■□□□□ 0.81
INO80E-203ENST00000540562 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
INO80E-203ENST00000540562 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
INO80E-203ENST00000540562 FOXD1Q16676 465 aa20.06■□□□□ 0.8
INO80E-203ENST00000540562 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
INO80E-203ENST00000540562 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
INO80E-203ENST00000540562 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
INO80E-203ENST00000540562 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
INO80E-203ENST00000540562 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
INO80E-203ENST00000540562 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
INO80E-203ENST00000540562 ANP32CO43423 234 aa19.99■□□□□ 0.79
INO80E-203ENST00000540562 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
INO80E-203ENST00000540562 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
INO80E-203ENST00000540562 TSHZ2Q9NRE2 1034 aa19.94■□□□□ 0.78
INO80E-203ENST00000540562 POLR3GLQ9BT43 218 aa19.92■□□□□ 0.78
INO80E-203ENST00000540562 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
INO80E-203ENST00000540562 CCDC18Q5T9S5 1454 aa19.88■□□□□ 0.77
INO80E-203ENST00000540562 NEFLP07196 543 aa19.87■□□□□ 0.77
INO80E-203ENST00000540562 CASKIN1Q8WXD9 1431 aa19.87■□□□□ 0.77
INO80E-203ENST00000540562 HNRNPUQ00839 825 aaKnown RBP eCLIP19.86■□□□□ 0.771e-7■■□□□ 13.2
INO80E-203ENST00000540562 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
INO80E-203ENST00000540562 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
INO80E-203ENST00000540562 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.771e-7■■■■■ 40.7
INO80E-203ENST00000540562 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
INO80E-203ENST00000540562 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
INO80E-203ENST00000540562 FBLN2P98095 1184 aa19.83■□□□□ 0.77
INO80E-203ENST00000540562 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.76
INO80E-203ENST00000540562 FMN1Q68DA7 1419 aa19.83■□□□□ 0.76
INO80E-203ENST00000540562 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
INO80E-203ENST00000540562 ZNF777Q9ULD5 760 aaPredicted RBP19.81■□□□□ 0.76
INO80E-203ENST00000540562 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
INO80E-203ENST00000540562 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
INO80E-203ENST00000540562 ZNF644Q9H582 1327 aaPredicted RBP19.8■□□□□ 0.76
INO80E-203ENST00000540562 HSPA5P11021 654 aaKnown RBP19.79■□□□□ 0.76
INO80E-203ENST00000540562 MAP3K1Q13233 1512 aa19.78■□□□□ 0.76
INO80E-203ENST00000540562 CFAP43Q8NDM7 1665 aa19.78■□□□□ 0.76
INO80E-203ENST00000540562 CCDC184Q52MB2 194 aa19.77■□□□□ 0.76
INO80E-203ENST00000540562 FAM9BQ8IZU0 186 aa19.77■□□□□ 0.76
INO80E-203ENST00000540562 NAIPQ13075 1403 aa19.74■□□□□ 0.75
INO80E-203ENST00000540562 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
INO80E-203ENST00000540562 MYOM3Q5VTT5 1437 aa19.73■□□□□ 0.75
INO80E-203ENST00000540562 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
INO80E-203ENST00000540562 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
INO80E-203ENST00000540562 WASHC2AQ641Q2 1341 aa19.7■□□□□ 0.74
INO80E-203ENST00000540562 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
INO80E-203ENST00000540562 UACAQ9BZF9 1416 aa19.7■□□□□ 0.74
INO80E-203ENST00000540562 C11orf95C9JLR9 678 aaPredicted RBP19.7■□□□□ 0.74
INO80E-203ENST00000540562 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
INO80E-203ENST00000540562 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
INO80E-203ENST00000540562 EFCAB5A4FU69 1503 aa19.68■□□□□ 0.74
INO80E-203ENST00000540562 MAGI3Q5TCQ9 1506 aa19.67■□□□□ 0.74
INO80E-203ENST00000540562 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
INO80E-203ENST00000540562 TIMELESSQ9UNS1 1208 aa19.66■□□□□ 0.74
INO80E-203ENST00000540562 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
INO80E-203ENST00000540562 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
INO80E-203ENST00000540562 EIF4G2P78344 907 aaKnown RBP eCLIP19.65■□□□□ 0.74
INO80E-203ENST00000540562 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
INO80E-203ENST00000540562 LRRIQ1Q96JM4 1722 aa19.63■□□□□ 0.73
INO80E-203ENST00000540562 CUL7Q14999 1698 aa19.62■□□□□ 0.73
INO80E-203ENST00000540562 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
INO80E-203ENST00000540562 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
INO80E-203ENST00000540562 KDM6BO15054 1643 aa19.6■□□□□ 0.73
INO80E-203ENST00000540562 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
INO80E-203ENST00000540562 RBM19Q9Y4C8 960 aaKnown RBP19.58■□□□□ 0.73
INO80E-203ENST00000540562 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
INO80E-203ENST00000540562 KDM2AQ9Y2K7 1162 aa19.55■□□□□ 0.72
INO80E-203ENST00000540562 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
INO80E-203ENST00000540562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.723e-8■■■■■ 27.7
INO80E-203ENST00000540562 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
INO80E-203ENST00000540562 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
INO80E-203ENST00000540562 EPRSP07814 1512 aaKnown RBP19.52■□□□□ 0.72
INO80E-203ENST00000540562 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.72
INO80E-203ENST00000540562 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
INO80E-203ENST00000540562 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
INO80E-203ENST00000540562 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
INO80E-203ENST00000540562 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
INO80E-203ENST00000540562 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
INO80E-203ENST00000540562 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
INO80E-203ENST00000540562 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
INO80E-203ENST00000540562 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms